
Csor.00g097480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAAATCTGTTCATCTGTTCGGTTGTTCATCTGGGTTTGTTTCAAATCTTCTGAAACCCAATAGTATTGTTGGATTCAGTCTTAATTTCATCTCTTCCAAACGGTTGCCAACGTCGTCTTCTTGTTCTTCTTCAAGATTGTCATGTGCTAGCAGCGGTTCCATGTTCTTGGCTCCTCGAACTGCTTCTTTCAAAGCGTTTTGTGGGTCTACATGTTCTGAGGCAAATCAAGACGGCACTTCCACGTCTCCCTTGTCTATGTCAGAATCACCGCCGCCATCATCTTCAACTGTAGTCCACTCAGCTGTGAGTCATTCTTTTGATTGATGAGTATCAATTTCACTTATGGTGCCTGTTTTCATTCATTTGGGTTCATTGTGACGATTAATTGTGTATCTGGGGAAAGTTCATATTGCCCTATTAGATATTGGTCCCCTTAATGATGATAGAAACGTATAGCCGTAGGATGGGTTGCTTGGTAACAAATGATACATACAAGGTTTTATGTTTGATCAATGAAAAACTCCCAACCTAGGGTGATTTGTATGCATTTCTTTTCATTTTTATTGCATTTAACTTTTGCATTACTGACTGGCTATATTGTTGAAGCAAGATTGACCGCACTCACGCACCCACAAACAAAAATTAAATGAAGAGACACAAAGATTACGTGGTTTGGAACGAAGAAATTCCCCTACATCCACGGGTAGCAACCAATCTCAATAATCTAAGTGTTTACAAAATGTATATCTCACACTCTCACACTACAAAATCTCTCAACAAACTTCCTCCTAAATGACACTCAGATTCAATACCTCTCAACCATCTTAGACAACCCTTTATATAGGCATAGAAGCGTTAACGTCATACATGAAAAAGGGTTATGAACCAAATAAATGTCAATACATTCATAGGAGATACACGAACCTATTCTTCGCTACAACTTACAACATATACGAATGGAATCTCTTATACAGGAAAAAATTCGTAATGTACGGTTCTGCCAGTGGTGTGGAGGCCAAACAAAGCATGGAATTCCTGATGATGAGGAGAAACTGAGAGCTATTTGCACAGTTTGTGGGAAGATAACCTATCAGAATCCAAAGATGGTAATACTCTTGTTTTGCATTAGATTTTTGGAGTTTGCTAGGCCAACTTTAAAATTTTGTCAGTGAGGCATTCTTTTAGTAACCAAATAGTTAATAATTACTCGAACGTGAATATAAGAACAAGATAATCATATATCTTCATTGATTCAGTGATAAAAGATGGATAACTTTCCGTTCAAACATGAAATGTTCTTTGCTTTACTATTATAATTTAGCAGGAGTTTACTACAATCAAGATCTGAATGTTTAAGCAAAGTTTTCTTGTTCATATATCATCATTTAGAAACATATTTTGCACTAGTATTGTTATTGTTTGCGTTTTCTGTTCTTAGTTTATGTTTCTTTTTATGTTTTCCTGGTGGATTTGCTTAGAGCTATATATTACGCTAGTGTTAAAGAGTTTGTACATGCAGATATATCCATTGCGAACCATGTTCATATGCAGTGTGGACTTTGTTATATTTTTTTTTTTTGTAATAGTCCAAGCCCACCGTTAGCAGATATTGTCCTCTTTTAAGTTTTTCCTTTCGAGCTTCCTTCAAAGTTTGTAAATACGTCAGCTAAGGAGAGGTTTCCACACTCTTATAAAAAAATGTTTCGTTCTCTTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTTCAGGGCCCAACGTCCTTACTGGCACTCATTCCCTTCTCTAATCAATGTGGAACCCCCCAATCCACCCCCTTCAAGGCTTAACCTCTTTGCTAGCACATTGCCCGATGTCTGGCTTTGGTTATTAGAAATGGAATTTCTTCAACTGGAAAAGCCTAAAGAGAACAATATCTGCTAGTGATGGGCTTGAGCTGTTACATCCTTGCTCATTAGTTTGTTCTCCTATATGGATAAAAGCTATACTTATATGTATTTTCTGGAATGATACTTGTAGGTTGTGGGTTGTTTGATTCATCATGATGACAAGATCTTACTTTGCAAGAGGAAGATCGAGCCATCTTATGGCCTATGGTATGTACGTTGACGACGTTTAAATCCGTTAAGAAAACCAAAATGTGCATAACGCCGCAGCGAATAACGTATTGACACTTAGTTAATCCTTCCTTCTTTGATAACTTTTATTACTGCATTTGAGATCTAGTTATTCAATAGGACTCTCCCGGCTGGTTACATGGAAATTGGGGAGTCAGCTGTTGATGGTGCAATTAGGGAAACCTTGGAAGAAGCAAATGCAGAAGTTGAAGTTACATCCCCTTTTGCTCAGCTAGACATCCCTCTAATTGGCCAAGTAAGAAAGAAACATCTTTTCCTGATCATATTTCGGCGTCCCGTATACTTAATATATGACGTAATCGACGTTTGTTTTTGTAGACGTATATAATTTTCAGGGGAAAGTTGAAGAAACCCCATTTCTCTCCCGGTCCCGAATCCATAGAATGTTGCCTTTTTTCTCTTGACGATATACCTTTCGAGTCTCTTGCATTTTCATCCATGCTGGTTACCTTAAAACTGGTACGTGCCTTTTGAACTTCAATATGCTGGTTACCACAAAGCATTTGAGCCTTATTTTCGTAAAAAGAAAGATGTAGTGTAATGACCCAAGCCCACCGCTAACAGATATTGTCCTCTTTGGGCACTCCTTTCCAGGCTTCTCCTCAAGGTTTTAAAACGCGTTCGCTAGGGAGAGGTTTCCACACCTGTAATAGTCCAAACTCACTGCTAGTAGATATTGTCATTTTTTAGCTTTCCCTTTAAGGGGTTCTCCTCAAGGTTTTAAAACTCGTCTACTAGGGAAAGGTTTGCACACCCTCATAAGGAATGCTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCAAAAAAAGTCGGGGGTTACCAGTAAATGAACTAGTAATTTTGCTACAAAATATTTGATGGCTTTAAAGCAACTAGATCTTGTTCTTGTGAGTGCAGTATGTTGAGGATGTCAAGGCAGGAAGAGTCTCATTCCATTATGGCACCATCAATAAAAGGTACTTATTCAGATATTCGATTAAATACATGTTTCATATTATTCTAATTCACATTGAGGGTTGTTTTGTGATATAGGAAGTCTATTTCTGTATGTATTCTGGATATATATATATATATATGATATGATGTCTTTGGTGTAATTCACATTTTTTGTGCAGACCGATCGATTTGTAAAACGGGTCTTTCGTAAAATTCAATAATAAACCCAAAAGCTCGAGTAGATAGGTTGTAACATCCCAAGCCCACCGTTAGCCGATGTTGTTTTCTTTGGGCTTTCCCTTTCGAGCTTCTCCTCAAGGTTTTTAAAACGTGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTTCTCCCCAATCGACGTGGGATCTCACATAGGTTATGATATATTTAATCTTTTATGAAAATTCTTCATACTCCCACTCATATGTAGACTTAGATATTAATTTAATTTATGAAGTGTAACACATGAATTATTAATATCAATTGGGGGAGGAAATACCAGGTGGGAATTCAAATATATAATCTCACCACTAAACCCATTATCTATTTGAACGAGCTCTAGTTGTGTAAGATCAAAGCTCAAAAAGGACAATGTTGGCTAGCGGTGGGCTTGGGCTGTTACAAAGGGTATTAGAGTCAAACACCGGGTGGTGTGCCAGCAAGGACGCTGAGCCTCGAAAAGGGGTGGATTGTGAGATCCCACATCGATTAGAGAGGGGAACGAGTGCCAGCGAGAACGCTCGTCCCTAGAGGGAGGTGGAATGTGAGATCCCACATCAGTTGGAGAAGGAAACGAAACATTCTTTATATGGGTGTTGAAACCTTTCCCTAGTAAGACACGTTTTAAAATCTTGAGAGGGAGTCTAGGAGTGAAAGCCCAAAGAAGATAATATCTGCTAAATCTCTTTAGTTCGATTTCTTTAGAATAATCATGCTTCCTAGTTCTTAAAACCTTCTTACTCTGACCTAGTAACTAGTGTATAAGGGGTTGATGCAGTTCAATTCATTGGATGTTTTTGGCATTTAATTTTGTTTGTGGACTGTTTTTGTCAGGCCTGGCACAGGTGCTTCAGATATTCATGCCTATACTCTTGATTATCATCTAAGATTGTGA ATGCTAAAATCTGTTCATCTGTTCGGTTGTTCATCTGGGTTTGTTTCAAATCTTCTGAAACCCAATAGTATTGTTGGATTCAGTCTTAATTTCATCTCTTCCAAACGGTTGCCAACGTCGTCTTCTTGTTCTTCTTCAAGATTGTCATGTGCTAGCAGCGGTTCCATGTTCTTGGCTCCTCGAACTGCTTCTTTCAAAGCGTTTTGTGGGTCTACATGTTCTGAGGCAAATCAAGACGGCACTTCCACGTCTCCCTTGTCTATGTCAGAATCACCGCCGCCATCATCTTCAACTGTAGTCCACTCAGCTGAAAAAATTCGTAATGTACGGTTCTGCCAGTGGTGTGGAGGCCAAACAAAGCATGGAATTCCTGATGATGAGGAGAAACTGAGAGCTATTTGCACAGTTTGTGGGAAGATAACCTATCAGAATCCAAAGATGGTTGTGGGTTGTTTGATTCATCATGATGACAAGATCTTACTTTGCAAGAGGAAGATCGAGCCATCTTATGGCCTATGGACTCTCCCGGCTGGTTACATGGAAATTGGGGAGTCAGCTGTTGATGGTGCAATTAGGGAAACCTTGGAAGAAGCAAATGCAGAAGTTGAAGTTACATCCCCTTTTGCTCAGCTAGACATCCCTCTAATTGGCCAAACGTATATAATTTTCAGGGGAAAGTTGAAGAAACCCCATTTCTCTCCCGGTCCCGAATCCATAGAATGTTGCCTTTTTTCTCTTGACGATATACCTTTCGAGTCTCTTGCATTTTCATCCATGCTGGTTACCTTAAAACTGTATGTTGAGGATGTCAAGGCAGGAAGAGTCTCATTCCATTATGGCACCATCAATAAAAGGCCTGGCACAGGTGCTTCAGATATTCATGCCTATACTCTTGATTATCATCTAAGATTGTGA ATGCTAAAATCTGTTCATCTGTTCGGTTGTTCATCTGGGTTTGTTTCAAATCTTCTGAAACCCAATAGTATTGTTGGATTCAGTCTTAATTTCATCTCTTCCAAACGGTTGCCAACGTCGTCTTCTTGTTCTTCTTCAAGATTGTCATGTGCTAGCAGCGGTTCCATGTTCTTGGCTCCTCGAACTGCTTCTTTCAAAGCGTTTTGTGGGTCTACATGTTCTGAGGCAAATCAAGACGGCACTTCCACGTCTCCCTTGTCTATGTCAGAATCACCGCCGCCATCATCTTCAACTGTAGTCCACTCAGCTGAAAAAATTCGTAATGTACGGTTCTGCCAGTGGTGTGGAGGCCAAACAAAGCATGGAATTCCTGATGATGAGGAGAAACTGAGAGCTATTTGCACAGTTTGTGGGAAGATAACCTATCAGAATCCAAAGATGGTTGTGGGTTGTTTGATTCATCATGATGACAAGATCTTACTTTGCAAGAGGAAGATCGAGCCATCTTATGGCCTATGGACTCTCCCGGCTGGTTACATGGAAATTGGGGAGTCAGCTGTTGATGGTGCAATTAGGGAAACCTTGGAAGAAGCAAATGCAGAAGTTGAAGTTACATCCCCTTTTGCTCAGCTAGACATCCCTCTAATTGGCCAAACGTATATAATTTTCAGGGGAAAGTTGAAGAAACCCCATTTCTCTCCCGGTCCCGAATCCATAGAATGTTGCCTTTTTTCTCTTGACGATATACCTTTCGAGTCTCTTGCATTTTCATCCATGCTGGTTACCTTAAAACTGTATGTTGAGGATGTCAAGGCAGGAAGAGTCTCATTCCATTATGGCACCATCAATAAAAGGCCTGGCACAGGTGCTTCAGATATTCATGCCTATACTCTTGATTATCATCTAAGATTGTGA MLKSVHLFGCSSGFVSNLLKPNSIVGFSLNFISSKRLPTSSSCSSSRLSCASSGSMFLAPRTASFKAFCGSTCSEANQDGTSTSPLSMSESPPPSSSTVVHSAEKIRNVRFCQWCGGQTKHGIPDDEEKLRAICTVCGKITYQNPKMVVGCLIHHDDKILLCKRKIEPSYGLWTLPAGYMEIGESAVDGAIRETLEEANAEVEVTSPFAQLDIPLIGQTYIIFRGKLKKPHFSPGPESIECCLFSLDDIPFESLAFSSMLVTLKLYVEDVKAGRVSFHYGTINKRPGTGASDIHAYTLDYHLRL Homology
BLAST of Csor.00g097480 vs. ExPASy Swiss-Prot
Match: P93740 (Nudix hydrolase 23, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT23 PE=1 SV=2) HSP 1 Score: 334.3 bits (856), Expect = 1.4e-90 Identity = 175/303 (57.76%), Postives = 212/303 (69.97%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy Swiss-Prot
Match: Q7N961 (NAD-capped RNA hydrolase NudC OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=nudC PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.7e-08 Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy Swiss-Prot
Match: Q58549 (ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=nudF PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.6e-07 Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy Swiss-Prot
Match: A7MJ81 (NAD-capped RNA hydrolase NudC OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=nudC PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy Swiss-Prot
Match: C5BHE7 (NAD-capped RNA hydrolase NudC OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=nudC PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of Csor.00g097480 vs. NCBI nr
Match: KAG6580804.1 (Nudix hydrolase 23, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 611 bits (1575), Expect = 1.59e-220 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of Csor.00g097480 vs. NCBI nr
Match: XP_023526942.1 (nudix hydrolase 23, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 604 bits (1557), Expect = 8.83e-218 Identity = 302/304 (99.34%), Postives = 302/304 (99.34%), Query Frame = 0
BLAST of Csor.00g097480 vs. NCBI nr
Match: XP_022934288.1 (nudix hydrolase 23, chloroplastic [Cucurbita moschata]) HSP 1 Score: 604 bits (1557), Expect = 8.83e-218 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of Csor.00g097480 vs. NCBI nr
Match: XP_022983042.1 (nudix hydrolase 23, chloroplastic [Cucurbita maxima]) HSP 1 Score: 599 bits (1545), Expect = 5.96e-216 Identity = 299/304 (98.36%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of Csor.00g097480 vs. NCBI nr
Match: XP_038904907.1 (nudix hydrolase 23, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 564 bits (1454), Expect = 4.77e-202 Identity = 277/305 (90.82%), Postives = 290/305 (95.08%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy TrEMBL
Match: A0A6J1F791 (nudix hydrolase 23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441496 PE=4 SV=1) HSP 1 Score: 604 bits (1557), Expect = 4.28e-218 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy TrEMBL
Match: A0A6J1IY67 (nudix hydrolase 23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481706 PE=4 SV=1) HSP 1 Score: 599 bits (1545), Expect = 2.89e-216 Identity = 299/304 (98.36%), Postives = 300/304 (98.68%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy TrEMBL
Match: A0A5A7TPK7 (Nudix hydrolase 23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005370 PE=4 SV=1) HSP 1 Score: 555 bits (1429), Expect = 1.49e-198 Identity = 275/306 (89.87%), Postives = 291/306 (95.10%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy TrEMBL
Match: A0A1S3B747 (nudix hydrolase 23, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486759 PE=4 SV=1) HSP 1 Score: 555 bits (1429), Expect = 1.49e-198 Identity = 275/306 (89.87%), Postives = 291/306 (95.10%), Query Frame = 0
BLAST of Csor.00g097480 vs. ExPASy TrEMBL
Match: A0A0A0LGX9 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G806280 PE=4 SV=1) HSP 1 Score: 553 bits (1425), Expect = 6.07e-198 Identity = 271/306 (88.56%), Postives = 291/306 (95.10%), Query Frame = 0
BLAST of Csor.00g097480 vs. TAIR 10
Match: AT2G42070.1 (nudix hydrolase homolog 23 ) HSP 1 Score: 334.3 bits (856), Expect = 9.9e-92 Identity = 175/303 (57.76%), Postives = 212/303 (69.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|