Csor.00g096720 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g096720
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 1543332 .. 1544063 (-)
RNA-Seq ExpressionCsor.00g096720
SyntenyCsor.00g096720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA

mRNA sequence

ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA

Coding sequence (CDS)

ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA

Protein sequence

MDDDTQGKNEEEEEEEIDEEAAAAAAAAIARETSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSSFKIDLDFPVGSKRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDSVAAAAAAAVVVRKERVLGCRHDGQGQADLSLWWSPEDLKRNGSFIIIIIFFFFFFVNIFSETDLGLFSNLFWRFKMGAF
Homology
BLAST of Csor.00g096720 vs. NCBI nr
Match: KAG6580728.1 (hypothetical protein SDJN03_20730, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447 bits (1151), Expect = 6.17e-158
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0

Query: 1   MDDDTQGKNEEEEEEEIDEEAAAAAAAAIARETSKSRKAPRINPWLFLPLTLKYQLKSSS 60
           MDDDTQGKNEEEEEEEIDEEAAAAAAAAIARETSKSRKAPRINPWLFLPLTLKYQLKSSS
Sbjct: 1   MDDDTQGKNEEEEEEEIDEEAAAAAAAAIARETSKSRKAPRINPWLFLPLTLKYQLKSSS 60

Query: 61  KLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSSFKIDLDFPVGS 120
           KLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSSFKIDLDFPVGS
Sbjct: 61  KLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSSFKIDLDFPVGS 120

Query: 121 KRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDSVAAAAAAAVVVRKERV 180
           KRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDSVAAAAAAAVVVRKERV
Sbjct: 121 KRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDSVAAAAAAAVVVRKERV 180

Query: 181 LGCRHDGQGQADLSLWWSPEDLKRNGSFIIIIIFFFFFFVNIFSETDLGLFSNLFWRFKM 240
           LGCRHDGQGQADLSLWWSPEDLKRNGSFIIIIIFFFFFFVNIFSETDLGLFSNLFWRFKM
Sbjct: 181 LGCRHDGQGQADLSLWWSPEDLKRNGSFIIIIIFFFFFFVNIFSETDLGLFSNLFWRFKM 240

Query: 241 GAF 243
           GAF
Sbjct: 241 GAF 243

BLAST of Csor.00g096720 vs. NCBI nr
Match: THU49304.1 (hypothetical protein C4D60_Mb06t08140 [Musa balbisiana])

HSP 1 Score: 67.0 bits (162), Expect = 1.35e-09
Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 0

Query: 50  LTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSS 109
           +  +YQ  SSS   QSLSP A TISSID  KS+ GSS+S  +  +PS NGG  A    +S
Sbjct: 63  MNTRYQPSSSSSRSQSLSPCAVTISSIDRRKSRWGSSDSTASATLPS-NGGSLA---LAS 122

Query: 110 FKIDLDFPVGSKRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDS 164
             I+L  P GSK+S S D  PR  +S   PPE SD VE+L   S+E  K +S +S
Sbjct: 123 SSIELA-PPGSKKSRS-DRTPRTTVSSEPPPESSDTVEKLSCSSDEREKHDSLES 171

BLAST of Csor.00g096720 vs. NCBI nr
Match: EAZ17492.1 (hypothetical protein OsJ_33024 [Oryza sativa Japonica Group])

HSP 1 Score: 65.9 bits (159), Expect = 8.11e-09
Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 0

Query: 27  AAIARETSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSS 86
           AA AR T +S KA  +  WL LPLT +YQ +SSS+  Q   P A+TISS+D  KS  GSS
Sbjct: 29  AAAARPTRRSTKAATMRAWLCLPLTRRYQTRSSSRASQRRRPCAATISSMDDRKSLYGSS 88

Query: 87  ESIDTTVVPSFN-GGGTAAFFFSSF------------------KIDLDFPVGSKRSLSVD 130
           +S  T  + S +  GG+ +F FSS                   +++L    GSK+  SV+
Sbjct: 89  DSTATATLSSTSDAGGSGSFSFSSSWNTAAAATGFVSGTAAAARMELVGGPGSKKKRSVE 148

BLAST of Csor.00g096720 vs. NCBI nr
Match: KAG6507208.1 (hypothetical protein ZIOFF_032549 [Zingiber officinale])

HSP 1 Score: 55.8 bits (133), Expect = 8.12e-05
Identity = 60/163 (36.81%), Postives = 71/163 (43.56%), Query Frame = 0

Query: 31   RETSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESID 90
            R  S S  A    PW+   L  +Y    SS   QSL+P A +ISSID LKS  GSSES  
Sbjct: 1605 RSKSISTNAATTIPWVLFSLAARYHRSISSSQAQSLTPCAISISSIDCLKSLYGSSESTS 1664

Query: 91   TTVVPSFNGGGTAAFFFSSFKIDLDFPVGSKRSLSVDLRPRIILSIGSPPEHSDAVERLP 150
            T   PS   G   A              GSK+SLS DL PR   S+     H D      
Sbjct: 1665 TATSPSNAAGSIVAAVH-----------GSKKSLS-DLTPRATASL----RHDDD----- 1724

Query: 151  EDSEESVKKESEDSVAAAAAAAVVVRKERVLG--CRHDGQGQA 191
            +D+    KK S  S +          KE V G  C  +GQG+A
Sbjct: 1725 DDNSTRSKKGSSKSFSN--------MKESVFGFGCAQEGQGRA 1738

BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0E0CAP2 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.07e-11
Identity = 74/199 (37.19%), Postives = 94/199 (47.24%), Query Frame = 0

Query: 33  TSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTT 92
           T  S  A  +   + LPL  +Y    SS   QS +P A+TISS+D  KS  GSS+S + T
Sbjct: 3   TMTSMNAANMAACVSLPLARRYHPSISSSQPQSPTPCATTISSMDTRKSTYGSSDS-NAT 62

Query: 93  VVPSFNGGGTAA--FFFSSFKIDLDFPVGSKRSLSVDLRPRIILS-----IGSPPEHSDA 152
             P       AA   F SS ++  D P GSKRS S + RPR + S       +P + SDA
Sbjct: 63  ATPPMKEASPAAPDDFSSSMELVADAP-GSKRSRSEERRPRTMASSAVSAASAPADASDA 122

Query: 153 VERLPEDS---EESVKKESEDSVAAAA--------AAAVVVRKERVLGCRHDGQ------ 200
           VERL E S   EE VK++S +S    A          AV  RK+ VLG   DG       
Sbjct: 123 VERLSEQSCRAEEVVKEDSAESRKMEAMVLEPGGGGGAVAARKDCVLGFLQDGHTHGGAV 182

BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0D9YHT9 (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.54e-10
Identity = 73/199 (36.68%), Postives = 93/199 (46.73%), Query Frame = 0

Query: 33  TSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTT 92
           T  S  A  +   + LPL  +Y    SS   Q  +P A+TISS+D  KS  GSS+S + T
Sbjct: 3   TMTSMNAANMAACVSLPLARRYHPSISSSQPQLPTPCATTISSMDTRKSTYGSSDS-NAT 62

Query: 93  VVPSFNGGGTAAF--FFSSFKIDLDFPVGSKRSLSVDLRPRIILS-----IGSPPEHSDA 152
             P       AA   F SS ++  D P GSKRS S + RPR + S       +P + SDA
Sbjct: 63  ATPPMKEASPAASDDFSSSMELVADAP-GSKRSRSEERRPRTMASSAVSAASAPADASDA 122

Query: 153 VERLPEDS---EESVKKESEDSVAAAA--------AAAVVVRKERVLGCRHDGQ------ 200
           VERL E S   EE VK++S +S    A          AV  RK+ VLG   DG       
Sbjct: 123 VERLSEQSCRAEEVVKEDSAESRKMEAMVLEPGGGGGAVAARKDCVLGFLQDGHTHGGAV 182

BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0D3EWM5 (Uncharacterized protein OS=Oryza barthii OX=65489 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.27e-10
Identity = 73/199 (36.68%), Postives = 93/199 (46.73%), Query Frame = 0

Query: 33  TSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTT 92
           T  S  A  +   + LPL  +Y    SS   Q  +P A+TISS+D  KS  GSS+S + T
Sbjct: 3   TMTSMNAANMATCVSLPLARRYHPSISSSQPQLPTPCATTISSMDTRKSTYGSSDS-NAT 62

Query: 93  VVPSFNGGGTAA--FFFSSFKIDLDFPVGSKRSLSVDLRPRIILS-----IGSPPEHSDA 152
             P       AA   F SS ++  D P GSKRS S + RPR + S       +P + SDA
Sbjct: 63  ATPPMKEASPAAPDDFSSSMELVADAP-GSKRSRSEERRPRTMASSAVSAASAPADASDA 122

Query: 153 VERLPEDS---EESVKKESEDSVAAAA--------AAAVVVRKERVLGCRHDGQ------ 200
           VERL E S   EE VK++S +S    A          AV  RK+ VLG   DG       
Sbjct: 123 VERLSEQSCRAEEVVKEDSAESRKMEAMVLEPGGGGGAVAARKDCVLGFLQDGHTHGGAV 182

BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A4S8IMU1 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t08140 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.53e-10
Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 0

Query: 50  LTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSS 109
           +  +YQ  SSS   QSLSP A TISSID  KS+ GSS+S  +  +PS NGG  A    +S
Sbjct: 63  MNTRYQPSSSSSRSQSLSPCAVTISSIDRRKSRWGSSDSTASATLPS-NGGSLA---LAS 122

Query: 110 FKIDLDFPVGSKRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDS 164
             I+L  P GSK+S S D  PR  +S   PPE SD VE+L   S+E  K +S +S
Sbjct: 123 SSIELA-PPGSKKSRS-DRTPRTTVSSEPPPESSDTVEKLSCSSDEREKHDSLES 171

BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A3C8S9 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_33024 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.92e-09
Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 0

Query: 27  AAIARETSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSS 86
           AA AR T +S KA  +  WL LPLT +YQ +SSS+  Q   P A+TISS+D  KS  GSS
Sbjct: 29  AAAARPTRRSTKAATMRAWLCLPLTRRYQTRSSSRASQRRRPCAATISSMDDRKSLYGSS 88

Query: 87  ESIDTTVVPSFN-GGGTAAFFFSSF------------------KIDLDFPVGSKRSLSVD 130
           +S  T  + S +  GG+ +F FSS                   +++L    GSK+  SV+
Sbjct: 89  DSTATATLSSTSDAGGSGSFSFSSSWNTAAAATGFVSGTAAAARMELVGGPGSKKKRSVE 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6580728.16.17e-158100.00hypothetical protein SDJN03_20730, partial [Cucurbita argyrosperma subsp. sorori... [more]
THU49304.11.35e-0947.83hypothetical protein C4D60_Mb06t08140 [Musa balbisiana][more]
EAZ17492.18.11e-0939.84hypothetical protein OsJ_33024 [Oryza sativa Japonica Group][more]
KAG6507208.18.12e-0536.81hypothetical protein ZIOFF_032549 [Zingiber officinale][more]
Match NameE-valueIdentityDescription
A0A0E0CAP29.07e-1137.19Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1[more]
A0A0D9YHT94.54e-1036.68Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1[more]
A0A0D3EWM56.27e-1036.68Uncharacterized protein OS=Oryza barthii OX=65489 PE=4 SV=1[more]
A0A4S8IMU16.53e-1047.83Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t08140 PE=4 SV=... [more]
A3C8S93.92e-0939.84Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_33024 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g096720.m01Csor.00g096720.m01mRNA