Csor.00g096720 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA ATGGATGACGATACACAAGGTAAGAATGAAGAAGAAGAAGAAGAAGAAATTGATGAAGAAGCCGCCGCCGCCGCCGCCGCCGCCATTGCAAGAGAGACAAGCAAATCAAGAAAAGCTCCAAGAATAAATCCATGGTTGTTTTTGCCATTAACACTCAAATACCAACTCAAAAGCTCCTCTAAGCTCTTCCAATCCCTCAGCCCATATGCTTCCACCATTTCCTCCATTGATTTCCTAAAATCCCAAAACGGATCATCGGAATCCATTGATACCACCGTCGTCCCTTCCTTCAATGGCGGCGGCACGGCCGCCTTCTTCTTCTCCTCTTTTAAAATCGACCTTGATTTTCCGGTGGGCTCGAAGAGGAGCCTCTCCGTCGACCTGAGGCCTCGAATCATTCTCTCAATTGGGTCACCGCCGGAGCACTCAGACGCCGTCGAGAGACTGCCGGAGGACTCGGAGGAGAGTGTGAAAAAGGAGTCCGAGGATTCTGTTGCGGCGGCGGCGGCGGCGGCGGTGGTTGTCCGGAAAGAGAGGGTTCTTGGCTGCCGACATGACGGCCAGGGCCAAGCCGACTTGTCGTTGTGGTGGAGTCCTGAGGATTTGAAGAGAAATGGGAGCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCGTTAACATCTTCTCTGAAACTGATTTGGGTTTGTTTTCAAATTTGTTTTGGAGATTCAAAATGGGAGCTTTCTGA MDDDTQGKNEEEEEEEIDEEAAAAAAAAIARETSKSRKAPRINPWLFLPLTLKYQLKSSSKLFQSLSPYASTISSIDFLKSQNGSSESIDTTVVPSFNGGGTAAFFFSSFKIDLDFPVGSKRSLSVDLRPRIILSIGSPPEHSDAVERLPEDSEESVKKESEDSVAAAAAAAVVVRKERVLGCRHDGQGQADLSLWWSPEDLKRNGSFIIIIIFFFFFFVNIFSETDLGLFSNLFWRFKMGAF Homology
BLAST of Csor.00g096720 vs. NCBI nr
Match: KAG6580728.1 (hypothetical protein SDJN03_20730, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447 bits (1151), Expect = 6.17e-158 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of Csor.00g096720 vs. NCBI nr
Match: THU49304.1 (hypothetical protein C4D60_Mb06t08140 [Musa balbisiana]) HSP 1 Score: 67.0 bits (162), Expect = 1.35e-09 Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of Csor.00g096720 vs. NCBI nr
Match: EAZ17492.1 (hypothetical protein OsJ_33024 [Oryza sativa Japonica Group]) HSP 1 Score: 65.9 bits (159), Expect = 8.11e-09 Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 0
BLAST of Csor.00g096720 vs. NCBI nr
Match: KAG6507208.1 (hypothetical protein ZIOFF_032549 [Zingiber officinale]) HSP 1 Score: 55.8 bits (133), Expect = 8.12e-05 Identity = 60/163 (36.81%), Postives = 71/163 (43.56%), Query Frame = 0
BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0E0CAP2 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 9.07e-11 Identity = 74/199 (37.19%), Postives = 94/199 (47.24%), Query Frame = 0
BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0D9YHT9 (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.54e-10 Identity = 73/199 (36.68%), Postives = 93/199 (46.73%), Query Frame = 0
BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A0D3EWM5 (Uncharacterized protein OS=Oryza barthii OX=65489 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.27e-10 Identity = 73/199 (36.68%), Postives = 93/199 (46.73%), Query Frame = 0
BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A0A4S8IMU1 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t08140 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 6.53e-10 Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of Csor.00g096720 vs. ExPASy TrEMBL
Match: A3C8S9 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_33024 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.92e-09 Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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