Csor.00g096450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATCGAAGTATGTGCAGGGGGTGACTGTATCTCTTGGGTGAGTGGCTCTGATTTGGAGTTGCAGATTTTTATTTATTTATTATTATTTTTTTTTCACCATTTTGTTCTCCATTACCCGGGAAAAAATAATAATAAACAAACCTATCAATTAGTTTTTTTTTTTTTCGTTAAATTGTAAAAAATAATCCGAAATCTTTCCTTTCTTTCGAAAACCTTTTTTTTTTTTTTTTTTCTTTACAAAATTAGTATATTAATTTTGATATTTCAGAGGCATTTTAAAATTTTAGAATATAGATTATTTGAAATCTCATAGGTCAAATTTACGATCATTTGGGCCCGATCGACCGAATAGCCCAACTCGAGATATCGGTGTTTGGGCTGAAGTTTCACAGTAGGCCCAATTATTTAAAATTTTCAGCCCATGAAAGTTGTTTCCCGGGTAAATACTCCCCGCCATCGAGGCCTCTCAGATTCCACTCTCTTCAACAGAAATTTGAAACCGCTGGAGGAAAAGGCTCCGCTGCAACCCTTTCGTCCTCTCCAAAACCTCGTTTGGATCTCGATGTCCTCATCCTTTGCAAATTCGTCGAAGATCTTCTTCAAGCTCCATTGTTACTGATTCTACGGCCAGTGATCCGCTGTAGCTACTTCACGGTTGCGATTGACCATTTACGCTCAGGAAACTCGAGTTTCTCTTGTTTTTGCACTCGCTTCCCGAGCATATATTCTCTCAGCGCTGTTATGTCTCGGTATTTGATTTTTTAATTGATAGTACTCGAAGTTTTAGTACTTGTTTAATCCGCACTTCTTCGTCTGGTTTGCAGTTTTGTCGGGGTCGGCTTACGAAACATCGAAATACTTGTTGCCTAAAAGGTTCGAGAGTCGAAATTTAGAGGAGGCTTGGAAGGTATGTCTATCTGGAGAACTTTGTTGTTGGTTGTGAATTTCACACTTGCGAGCTTCGTCCTGCGATTTAGCTCTAATGTAATTCAGCTCGTATTTCTATATCTTAATTGTTGTGAGTTTAATAATTCATTTTGAGTTAATCTAGTTCCTGATCTCGAAGATCTGAAGTTCAAGGTCTTAAATCGAAGAGACGAATATGAGATAAGGAAGGTTGAGGTATAATTTCTTCCCTCCTCAATTTACTCTTGTGCGGCCTTATTGCTTCAAACCTAAACATAATATTGACTTATTCTAACCATTAGCTCACAGACAGTAGCAATGATCGGTTGGACAGCCTTAATTTATAGCGGAAACAACCATACCTGGAAACAGTGGAGTTGAGTTCAGCGGTGCACATCAATCCTTCAATGCCTATACCGAGTACCTTTTTGGTAAGGTAGATTTGAAGCTCCGAGACGAAATCTGTCAATCTTGATCTCTGTTTTCCATCCTAATTTAAATCCGGTCCTAATACTAGAACAAGGCAAGAGAGAAAATAGAAATGACAAGACCTGTTTTGACGAGTCAATATAAATCTGATGGGGAAAAGATGGATATGATAACCCCTGTAGTAACGAAAAAAATGTAAGTTCTTCGCATCCTGACACCAGGTATTTTGATCATCTAAGTTATGTAATATTGAACTGTCCTTGATTTTTCATAATGCACATATAATCTTGCTTTTTAATAGTCGCAGATCCCTGTATGCAGTTTGCAGTATAATCCACCTTTTACTCTTCCATTTTAACATCGTAATGAGATTTCACTTGAAGTAGAGAAGAAAGAAGTATAGCAGTATCACTACCATCATATGATCTTGAAACTCACCTCTGGCGTATAGCCATATTTTACTCATATTATGAACTGTATATGAGTGTATATATGTCACTTTCACGTATAAATGCAGCTCCATCGTGTAATTGATGGTGCACCGATGGAACTCAATACTATGGATTTGATCATGCTAATGTCCTCAAATATTTACCTCTACCTCCTGAATATAGTAATTGGGAATTTCCATGTACCTGGGTTTGGATAAATGCTGATACACTGAACTTCAAGTTTTTTCTGCGGTATTAGGTTCATTATAATAAACTAAAAAATGTTGAATTATCTAAAGTTGAAATGCCTCGTAGGAACCTGATAACTAACTTTAGAGAATTGCGTACTTTTCTTTACCATTTCTCCTATGTAGGGAAGAGCTGAATTCATTTTGTTTATTATTATGACTTGTAGTACAAATTGACAGGGGAATTCTATTCCCTTCTCAATTGAACTGCGGAAACACTTCAATCATGGAGATATTAAAATTGAAAAAAAGTTGAATTGGAGGTAAATTGTTCAAGTGCCTAGAAACTATGAGCCATGGTTCTACTGCTATTCTGTCGAATGAAAAATGTTATTGTACACTCATAATTGTATACGAATTGGCTTGGAGCCGGAATTATGTCTGCTGCAATCATAATAATGGATTCGTTTTGATATAATTTTGACCTTGTTCGTTAGATCTGCAGGTTTCAGCCTGCAAAGGGTCTTCTACACAGCAGCACAACTAGGTCAGATAGAAATACAATTAGAACTGCAACTCCATATTCGGATTTTGTTATCATAAACCTGTCTGGCCTACATTTTCTCCAGCATAGCATGCTTATTATGTTGGCTATTCTCTTCCTTGCTTTTGTTATTAGAAGTGAAAACCAAAGAGATCTTACACTTTAA ATGGAGATCGAAGTATGTGCAGGGGGTGACTGTATCTCTTGGAAATTTGAAACCGCTGGAGGAAAAGGCTCCGCTGCAACCCTTTCGTCCTCTCCAAAACCTCGTTTGGATCTCGATGTCCTCATCCTTTGCAAATTCGTCGAAGATCTTCTTCAAGCTCCATTGTTACTGATTCTACGGCCAGTGATCCGCTGTAGCTACTTCACGGTTCGAGAGTCGAAATTTAGAGGAGGCTTGGAAGTTCCTGATCTCGAAGATCTGAAGTTCAAGGTCTTAAATCGAAGAGACGAATATGAGATAAGGAAGGTTGAGCGGAAACAACCATACCTGGAAACAGTGGAGTTGAGTTCAGCGGTGCACATCAATCCTTCAATGCCTATACCGAGTACCTTTTTGAACAAGGCAAGAGAGAAAATAGAAATGACAAGACCTGTTTTGACGAGTCAATATAAATCTGATGGGGAAAAGATGGATATGATAACCCCTGTAGTAACGAAAAAAATGTTTCAGCCTGCAAAGGGTCTTCTACACAGCAGCACAACTAGGTCAGATAGAAATACAATTAGAACTGCAACTCCATATTCGGATTTTGTTATCATAAACCTGTCTGGCCTACATTTTCTCCAGCATAGCATGCTTATTATGTTGGCTATTCTCTTCCTTGCTTTTGTTATTAGAAGTGAAAACCAAAGAGATCTTACACTTTAA ATGGAGATCGAAGTATGTGCAGGGGGTGACTGTATCTCTTGGAAATTTGAAACCGCTGGAGGAAAAGGCTCCGCTGCAACCCTTTCGTCCTCTCCAAAACCTCGTTTGGATCTCGATGTCCTCATCCTTTGCAAATTCGTCGAAGATCTTCTTCAAGCTCCATTGTTACTGATTCTACGGCCAGTGATCCGCTGTAGCTACTTCACGGTTCGAGAGTCGAAATTTAGAGGAGGCTTGGAAGTTCCTGATCTCGAAGATCTGAAGTTCAAGGTCTTAAATCGAAGAGACGAATATGAGATAAGGAAGGTTGAGCGGAAACAACCATACCTGGAAACAGTGGAGTTGAGTTCAGCGGTGCACATCAATCCTTCAATGCCTATACCGAGTACCTTTTTGAACAAGGCAAGAGAGAAAATAGAAATGACAAGACCTGTTTTGACGAGTCAATATAAATCTGATGGGGAAAAGATGGATATGATAACCCCTGTAGTAACGAAAAAAATGTTTCAGCCTGCAAAGGGTCTTCTACACAGCAGCACAACTAGGTCAGATAGAAATACAATTAGAACTGCAACTCCATATTCGGATTTTGTTATCATAAACCTGTCTGGCCTACATTTTCTCCAGCATAGCATGCTTATTATGTTGGCTATTCTCTTCCTTGCTTTTGTTATTAGAAGTGAAAACCAAAGAGATCTTACACTTTAA MEIEVCAGGDCISWKFETAGGKGSAATLSSSPKPRLDLDVLILCKFVEDLLQAPLLLILRPVIRCSYFTVRESKFRGGLEVPDLEDLKFKVLNRRDEYEIRKVERKQPYLETVELSSAVHINPSMPIPSTFLNKAREKIEMTRPVLTSQYKSDGEKMDMITPVVTKKMFQPAKGLLHSSTTRSDRNTIRTATPYSDFVIINLSGLHFLQHSMLIMLAILFLAFVIRSENQRDLTL Homology
BLAST of Csor.00g096450 vs. ExPASy Swiss-Prot
Match: Q9SR77 (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g10130 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of Csor.00g096450 vs. NCBI nr
Match: KAG6580701.1 (Heme-binding-like protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 456 bits (1174), Expect = 1.04e-161 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Csor.00g096450 vs. NCBI nr
Match: KAG7017459.1 (Heme-binding-like protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 350 bits (899), Expect = 1.04e-118 Identity = 190/251 (75.70%), Postives = 191/251 (76.10%), Query Frame = 0
BLAST of Csor.00g096450 vs. NCBI nr
Match: XP_016899615.1 (PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Cucumis melo] >KAA0043880.1 heme-binding-like protein [Cucumis melo var. makuwa] >TYK25257.1 heme-binding-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 2.79e-18 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Csor.00g096450 vs. NCBI nr
Match: XP_038904637.1 (heme-binding-like protein At3g10130, chloroplastic [Benincasa hispida]) HSP 1 Score: 90.5 bits (223), Expect = 1.98e-17 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 0
BLAST of Csor.00g096450 vs. NCBI nr
Match: XP_004149204.1 (heme-binding-like protein At3g10130, chloroplastic [Cucumis sativus] >KGN59135.1 hypothetical protein Csa_002265 [Cucumis sativus]) HSP 1 Score: 90.5 bits (223), Expect = 1.98e-17 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of Csor.00g096450 vs. ExPASy TrEMBL
Match: A0A5A7TKZ9 (Heme-binding-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003900 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.35e-18 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Csor.00g096450 vs. ExPASy TrEMBL
Match: A0A1S4DV81 (heme-binding-like protein At3g10130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486613 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.35e-18 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Csor.00g096450 vs. ExPASy TrEMBL
Match: A0A0A0LAW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776950 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 9.61e-18 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of Csor.00g096450 vs. ExPASy TrEMBL
Match: A0A6J1KUH7 (heme-binding-like protein At3g10130, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498783 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.31e-16 Identity = 54/99 (54.55%), Postives = 66/99 (66.67%), Query Frame = 0
BLAST of Csor.00g096450 vs. ExPASy TrEMBL
Match: A0A6J1CTY1 (heme-binding-like protein At3g10130, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014259 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 6.57e-16 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 0
BLAST of Csor.00g096450 vs. TAIR 10
Match: AT3G10130.1 (SOUL heme-binding family protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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