Csor.00g095510 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGTGTTATTGCGAATGATGAAATGAAGCAATCCAAGTTCAGGAGGATTTGTGTGTTCTGTGGAAGTAGCCAAGGCAAGAAGAAAAGCTACCAAGATTCCGCCATTGAACTTGGCAAGGAATTGGTAATCTTCCTCTCTTCTTTAACTCTATTATCGATTTCCCATTTCTCTGTATTTTGTGTTCGATGTTGCTATAGATTGTTTTACATTTCTTTCCTTCACTCCAATGCTTTTATGATCTTTACTACGTTTGTTGTTTGTTTTGAATCTTCGTCTTCCGTTGATGTTCATTTGGGATTCCCTGTGTTTGTGCTCGCAACGTGTTTGTGATAATGTCCGATCACGACCCTTTACTTATTTTGGCTAAAATCTTCCCCAACTTTGAATTTGCCTCTTCCATTTCCCATTAGAAACTGAAATTGCTAAGAAAATGCATGATGTTAGTAGGGTACAGTTTGTTTCTTTGTTGAGATTTTCGTTCAAATGGGCTTTCATACATACATTCAAACTGTAAGGAAAGAATCCCATTTCATAAAATGAAACTCTCGAGCCATTGAGATGACGAGTTGGGTTTTTTGTTGTTGTTTGAAGGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGGTATGCCCCCATTTTTTAATTACATCCACTGGTCCCTCCCTTCAACATTGTTTTTGTTTTTTGTGTTCCTTCTTTTGGGTTTATTCACCATTATAAGTTTACCACTGATTTTGTCATCTTACTGTTCTTGTCCAGAGTTATACCCAAGACACTCATGTCTCCTGAGGTATGTCTGTAACCAGCGGCTGCATAAAAGCCTTCAACCTTACCTTCCTTATTCAGCTATATTTTAAGAAAGAACCGTTCATTTTATTATTATTGAATCTGATTTTACATTTATTTATTCCAACTCATTCTTCTTTATGATACTTTGAGATCGTTCTTTTTGGCTATGCTTGGGAGCCTTATCCATGGTAGTTAGAATTTACAGCTCTCTTCGTTGTTACGAGGTCTTTTGGGATCTCCAAGTAAAGTTCCGAGAATTTATGCTTTTAAAGTTTACAATATCATACTATTGTTGAGATCCGTGATTACTAACATCTTAATCCTTTCTAATGTCAACATGGTTCATGATTTTTTTTTTTTTTTTTTTTTGAGTTCTTCATTTTAAGCCCTTCATTCTTATGTCATGCCAAGTTCAGAAAATTAGAGATCATCTCTGGATCAAAACCTTTTTGAATTGCCCTCCCTTTTCCTAGAGAACCCATCATTTTTCTCTCTCCAACAAGGCTCCAAAAGTCCTCTTTCTCTCTCTAACCTATCCCATTACGTGGTCTTCTTTTACAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGAGTATATAAAGCCTGCACATCAAATTCTTAAGCATTTGGGCTTTTATTACTCTCAGTCAAATCAATGTGCCCATTTGGGCTATGCTATCTGTCGGTCACTCAAAGCTCTAAAAACCCTTCTTTCAGATCTTCCTTTAGTTCACTCCTGTAAACAAAAACGTGCAATCCTCGTCTTATTCTCTTTTTACCATCAATTAATCTTACCCTTCTGCTTTCGGTGCCTGTCCTTCTAGCCTTCTTGTTTTACTGATCAATCAATTCAACTCCAAAAATCTCGGACTTATTCAACTTTTGCCACACAAACTATGTCACCATCTGCATTAATGGCGGTGTGCATTTATAGCAACTGTGGGCAGCCATCTTCTCCTTACATTTGGTCATGATTCATTAAGAAACCATCATTGACCCATCAATATCAGACACTGAAAAAGATAAGTCTCTTGAATCATACCAGCTGTGGGCAGCTATGTTCTTCCCAAAATTTGATCCTTAATTTCATAGCTATACCTCTGCCATGAACAGAAAACAAGGCAACTTTGACTCACTTTGCTTAAATGGTCGTTGCTATATGGGGAATCATTACATTCCCTCTTTGAAAACTTTTGTCCCCAATTGGTTCTTTTGAATTTCAAAACATTTAAGCTTCTTCCTAAACGTTCACAGATGCGTTTTGAAAACATTCCCCTTAAGTTTAAGAACTAAACTTGTAATTCGATCGAAAGCTGCCGAAATCAGAGCTTATTAAGATTAGTAGTCCATTAAGTATAGCAACAGTGATGGATCATCTTCATGTTATTAAAACTGCTAAATTCTTTGTTCCAATCATATGAATGCATGCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTATCTTATTTTTGTTATTCGAATATTCCATCTGCTCAGCCTTACTTTTGCCTGTGCTGTGATTGGTTAGCTATGATAGTTACTGAATATGAACAAAATGAATACTAAAAACTGCAGGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGTATCATGATAATAACATTGTTGTAAATAAAAATGTTCATTTAACTCACAAGGTTCGGAAAGAATCTCTCCGTAAACCGGGATTGAGAGAGGTAGTTATGAGAGATTTTTCCCTTTTAACTAGATGGGGCCTAGACAAGGATTTCTCGATTTCTCCCCGTTAGATATTCTCCACAAAATTCGTCTCACTCCGATCACTTTTCGTATATAAATATATAAATAAAATGTGGGATAGAACCTGATCCCTGCAAATTCTCACCAGGGAGTTTTCGCCCGGTCTTTGCCTTGCTCGGTAGACATTTCTAACTAAGATTGAGCATCAAATATGATACCATATAATTTCTTGTTCTTTAGCTTTATGGATTGGTTATGAGAGAAGCAAATGGAATCCTATGTGATGATTGTTGAGTTGTGTGTGTAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG ATGGAGGGTGTTATTGCGAATGATGAAATGAAGCAATCCAAGTTCAGGAGGATTTGTGTGTTCTGTGGAAGTAGCCAAGGCAAGAAGAAAAGCTACCAAGATTCCGCCATTGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGTCTCCTGAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG ATGGAGGGTGTTATTGCGAATGATGAAATGAAGCAATCCAAGTTCAGGAGGATTTGTGTGTTCTGTGGAAGTAGCCAAGGCAAGAAGAAAAGCTACCAAGATTCCGCCATTGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTTTACGGTGGGGGCAGCATAGGGCTGATGGGTTTAGTGTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGTCTCCTGAGTTGACTGGTGAAACTGTCGGGGAAGTGAAGACAGCGGCAGATATGCACCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCTTTGCCAGGTGGGTATGGGACTCTGGAAGAACTACTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCAGTCGGTGTGGGGCTGTTGAATGTTGATGGATACTACAATTCATTACTCTCATTTATTGATAAAGCTGTAGAGGAGGGATTCATCACTCCAAATGCGCGTCAAATTATCCTATCTACGCCATCAGTCAAGGAGCTAGTGAAGAAGTTGGAGGAGTATGTGCCTTGCCGTGACAGAGTTGCTTCAAAGCTGAGTTGGGCGATAGAATAG MEGVIANDEMKQSKFRRICVFCGSSQGKKKSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMSPELTGETVGEVKTAADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGVGLLNVDGYYNSLLSFIDKAVEEGFITPNARQIILSTPSVKELVKKLEEYVPCRDRVASKLSWAIE Homology
BLAST of Csor.00g095510 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97 Identity = 174/207 (84.06%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 2.2e-95 Identity = 173/207 (83.57%), Postives = 187/207 (90.34%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 9.7e-91 Identity = 167/200 (83.50%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 4.1e-89 Identity = 162/199 (81.41%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 5.3e-89 Identity = 163/210 (77.62%), Postives = 183/210 (87.14%), Query Frame = 0
BLAST of Csor.00g095510 vs. NCBI nr
Match: KAG6580607.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417 bits (1072), Expect = 5.87e-147 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Csor.00g095510 vs. NCBI nr
Match: XP_022934050.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 417 bits (1071), Expect = 8.34e-147 Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Csor.00g095510 vs. NCBI nr
Match: XP_022984094.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 411 bits (1057), Expect = 1.14e-144 Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Csor.00g095510 vs. NCBI nr
Match: XP_023528344.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411 bits (1056), Expect = 1.61e-144 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Csor.00g095510 vs. NCBI nr
Match: XP_022934051.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 408 bits (1048), Expect = 2.49e-143 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy TrEMBL
Match: A0A6J1F6J9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441335 PE=3 SV=1) HSP 1 Score: 417 bits (1071), Expect = 4.04e-147 Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy TrEMBL
Match: A0A6J1J9G6 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111482510 PE=3 SV=1) HSP 1 Score: 411 bits (1057), Expect = 5.50e-145 Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy TrEMBL
Match: A0A6J1F0S0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441335 PE=3 SV=1) HSP 1 Score: 408 bits (1048), Expect = 1.21e-143 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy TrEMBL
Match: A0A6J1J7R3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111482510 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 2.00e-142 Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0
BLAST of Csor.00g095510 vs. ExPASy TrEMBL
Match: A0A6J1CV24 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111015045 PE=3 SV=1) HSP 1 Score: 372 bits (956), Expect = 1.82e-129 Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Csor.00g095510 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 355.5 bits (911), Expect = 2.9e-98 Identity = 174/207 (84.06%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Csor.00g095510 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 349.7 bits (896), Expect = 1.6e-96 Identity = 173/207 (83.57%), Postives = 187/207 (90.34%), Query Frame = 0
BLAST of Csor.00g095510 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 339.7 bits (870), Expect = 1.6e-93 Identity = 173/231 (74.89%), Postives = 188/231 (81.39%), Query Frame = 0
BLAST of Csor.00g095510 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 334.3 bits (856), Expect = 6.9e-92 Identity = 167/200 (83.50%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of Csor.00g095510 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 313.5 bits (802), Expect = 1.3e-85 Identity = 154/200 (77.00%), Postives = 175/200 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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