Csor.00g095360 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g095360
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 860137 .. 860667 (+)
RNA-Seq ExpressionCsor.00g095360
SyntenyCsor.00g095360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAAGCTCAGACCTCTAATGGAGTTTCCCTCTTCTGCAGAGTTTTAATTCCTTTACCCTTTCTTCCGCTCGTTTCCACTTCGAAACCGCAAGGATTTAGGTATTTCCCTCCCCCGAGGACGTTGTTCTTTCATTTGTTTGGAAGTCCCGGCTTTTCTTCTTCTTCTGCTGCTGCTCGAGAACTTGTATTTGGATAATGTCTCTGTTTCTAAATTTCAGTTTATTCATTGTTGTCGCCTTCTAATATTGGCATGACCGATGAATTTTTTCATTTGTTCGGTTGTGCGGCTTGAAGTCTATCTGTTATCATGGAATGATATTGCGATGGGAACTCCAAACATCTCCTATTGAGGTACGCTTTTTGGACTCTGAATATTGTTTTTGCATTTGGGATTCAAAGGAATTTTCGTAGTGTATGAATATTTGTGATGGTTTTGTATTTTTATCGATATTGAAATGTTGTACGCAAGGTGTTTGAAGAATGTCCGCTTAGAGATATAGCTTCCATGTTTCGACGGGAACGGTGA

mRNA sequence

ATGAACGAAGCTCAGACCTCTAATGGAGTTTCCCTCTTCTGCAGAGTTTTAATTCCTTTACCCTTTCTTCCGCTCGTTTCCACTTCGAAACCGCAAGGATTTAGGTATTTCCCTCCCCCGAGGACGTTGTTCTTTCATTTGTTTGGAAGTCCCGGCTTTTCTTCTTCTTCTGCTGCTGCTCGAGAACTTTCTATCTGTTATCATGGAATGATATTGCGATGGGAACTCCAAACATCTCCTATTGAGGTGTTTGAAGAATGTCCGCTTAGAGATATAGCTTCCATGTTTCGACGGGAACGGTGA

Coding sequence (CDS)

ATGAACGAAGCTCAGACCTCTAATGGAGTTTCCCTCTTCTGCAGAGTTTTAATTCCTTTACCCTTTCTTCCGCTCGTTTCCACTTCGAAACCGCAAGGATTTAGGTATTTCCCTCCCCCGAGGACGTTGTTCTTTCATTTGTTTGGAAGTCCCGGCTTTTCTTCTTCTTCTGCTGCTGCTCGAGAACTTTCTATCTGTTATCATGGAATGATATTGCGATGGGAACTCCAAACATCTCCTATTGAGGTGTTTGAAGAATGTCCGCTTAGAGATATAGCTTCCATGTTTCGACGGGAACGGTGA

Protein sequence

MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFRYFPPPRTLFFHLFGSPGFSSSSAAARELSICYHGMILRWELQTSPIEVFEECPLRDIASMFRRER
Homology
[Close]
BLAST of Csor.00g095360 vs. NCBI nr
Match: KAG6580592.1 (hypothetical protein SDJN03_20594, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208 bits (530), Expect = 6.32e-68
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFRYFPPPRTLFFHLFGSPGFSSSSAAA 60
           MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFRYFPPPRTLFFHLFGSPGFSSSSAAA
Sbjct: 1   MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFRYFPPPRTLFFHLFGSPGFSSSSAAA 60

Query: 61  RELSICYHGMILRWELQTSPIEVFEECPLRDIASMFRRER 100
           RELSICYHGMILRWELQTSPIEVFEECPLRDIASMFRRER
Sbjct: 61  RELSICYHGMILRWELQTSPIEVFEECPLRDIASMFRRER 100

[Close]
BLAST of Csor.00g095360 vs. NCBI nr
Match: KAG7017348.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 76.3 bits (186), Expect = 1.41e-13
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1  MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFR 35
          MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFR
Sbjct: 1  MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFR 35

[Close]
BLAST of Csor.00g095360 vs. NCBI nr
Match: KAG6596458.1 (hypothetical protein SDJN03_09638, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.4 bits (137), Expect = 3.30e-08
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 1  MNEAQTSNGVSLFCRVLIPLPFLPLVSTSKPQGFRYFP 38
          MN+AQT NGV LFCRVLIP  F+ L+++SKPQ FR FP
Sbjct: 1  MNKAQTFNGVFLFCRVLIPSLFIQLIASSKPQRFRNFP 38

The following BLAST results are available for this feature:
BLAST of Csor.00g095360 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g095360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6580592.16.32e-68100.00hypothetical protein SDJN03_20594, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7017348.11.41e-13100.00Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper... [more]
KAG6596458.13.30e-0868.42hypothetical protein SDJN03_09638, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g095360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g095360 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g095360.m01Csor.00g095360.m01mRNA