Csor.00g093460 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g093460
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 1223535 .. 1225798 (+)
RNA-Seq ExpressionCsor.00g093460
SyntenyCsor.00g093460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCCAATTGCGTCTGTCCATGTAGGACATCTCTTTCAACGTGGCACTGTGGGCCCCGCCAAAACTGACAGGATTCTGACACCTGGCCACACAGCTTCATCACACGGCATAGAAGGTATGGAAAAGGTGAATAAAAAAAAGACCGTTGCGATTGTGGCCCTGTCGTCGTTCCAGCTCCGTCAAGACGTCGCAACCGACACTTTAACGGAGGTTAACGGTGTAAGTTTTTTAAAAAAGAAAGCCAGCTGTCATTCCACGCAATCAAAACAATGTATCGCCAAAATATCGTCGGTCAATCTCTCTTTTTACCATATTATTCGGAAAATTCGATGGGATTCATTTTTATCCTTGTTGGATTATTATTATTTTTAGATTTCTTTCTCTATTTTTTTTAAGGATTTTATTTTTTATTTTTTATTTTTTATTAATTTCTCAAAATGTCCATTTGGTGTGTTATTAATTTAGTGAATATGATGGATTTGTTTTTTTTTCTTTAATTTACATAATGAAATTAAGTTAGTCAACGTGAGGAATTTGTTTTTTAACATTTATTTAATCAAATTAATTCAGTCAATTTGATGGATTTAATTTCTTTTCTCCCAATATTTTATTTTTTTAATTATTTTTCTTAAATTTAAAAACTAAGAATGCTTAGATTAAATAATTAAATCGTTTCATTTTTATTAAAATAAAATTTTCACTTAATATATATGATATAATATTATAATATTAAGTTACACGATCAATTATGCATTTAAAGAACTTTTTTTTTCTACGTAAGATTATTAATTTTTAAAATTTAAATTATTTCTAATAAAAAATATTAATTTATTTAATACATTTTAAAATTAGAAAATTTACCATCAAATTAAAAGTTTAATAACTTAATAAACACAAAATTTAATGGGATAATTTATATAAAAATATTAAATATGCCAAAAAAAATTAACACCTTTAATTTTTTTTTTTAAATATTACGAGAACATTTAAAATTTAAGAATTTATTAAATATTTAATAAAATTAATAGGTTTTATTCAAATATGCATTTTTTTTTCAAGACAGAGCATTTAATAAGTTGAATAAGTTATTTAAAATGAAATCATATTTTGATTACTATTTTTTTGAATAAAGAAACATTGATTACTTTGAAGAATGCTTTTGTTAATAATAATAATGAGGCATGGGCAACGTTTTATTACGTTAAAAAAGAACTATAAAACTTAGATTTGAAGCAAAGTGATTATTTTTAATAACTTAGATGAGATGAGGAAATTTATTATATTTTTAAAAATTCAGACTAAAAAAAGAAAAAAAAAAGTAACCTTAGAAATTCACAAAATGTAAATAAAAAAAATGAATTTATCAGCGGAATATTTGTAAAATATCGCGATATATTGTCGGCGAATCGACAGCAGATTAAATGCAAGCAAATGTAACCAGCCATAGGATTCTGCCACGTGGATAGTAGACCTGTCTGATATTGAACACGTCATGTAAGGCTTTTTGATGACAGTGGGCCCTGTTTTCTTGATGTTTAGCTGGCCTGCATTTATTGGTCTGTTCCTTTAACCATGGGTGAGCAGTGAGCCCCAACCCAACTCCACCGTCACCCGCGGCTTAATTTCTTTGCGGTGTACGGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCAGTGTGTGTGTGTTTGGAGTGCGTATACACTAGGCCACGACCCTTGGCTTATCAAACTCATCATCTCTCTCATTTCTCTCTCTCATTTCTCTCTCTCTCCCTCTCCCTTTTTATATGTCTGTTTTTTTGCGGTTGCGCTGTCGTAGGTTGCCGGCGGAGAGTGGAGGAGCATAGGGAGGCGACATTTTTGGAGGCGGAGAAACCAATCCCATTTGGGGGTTTGAATTTGGGTACCCAATTGGGAGGATCTCATTTAGGGGATTGAAATAGGTGTTGATTGAGTTTGAGATGCGGCGTAGTCTTTGGAGAGTGGATTTCTTTTATGGTAATGTGTGAAGAGTTTTGAAGTCTAGATTTCGCTTTTCTTGTTTTTTCTTCCAATTGGGGTGTTTATAAGTGGATTAGATTGGTGGATTATTGTATTAGATGCATTTAGATTGGGACTTTGGGATTCAATCAGGGACTTCTGTTGGATACTTTTGCTTTTGGGCGTTGGATTTTCTGATACGGCATTGACCCAATTCAGGGGGAATTGAAACGACGACGTCCTTGACGTGGATCTCGGATCAGGAGGGCAAACCGTAG

mRNA sequence

ATGTACCCAATTGCGTCTGTCCATGTAGGACATCTCTTTCAACGTGGCACTGTGGGCCCCGCCAAAACTGACAGGATTCTGACACCTGGCCACACAGCTTCATCACACGGCATAGAAGGTATGGAAAAGGTGAATAAAAAAAAGACCGTTGCGATTGTGGCCCTGTCGTCGTTCCAGCTCCGTCAAGACGTCGCAACCGACACTTTAACGGAGGTTAACGGTGTGTTGATTGAGTTTGAGATGCGGCGTAGTCTTTGGAGAGTGGATTTCTTTTATGGGGGAATTGAAACGACGACGTCCTTGACGTGGATCTCGGATCAGGAGGGCAAACCGTAG

Coding sequence (CDS)

ATGTACCCAATTGCGTCTGTCCATGTAGGACATCTCTTTCAACGTGGCACTGTGGGCCCCGCCAAAACTGACAGGATTCTGACACCTGGCCACACAGCTTCATCACACGGCATAGAAGGTATGGAAAAGGTGAATAAAAAAAAGACCGTTGCGATTGTGGCCCTGTCGTCGTTCCAGCTCCGTCAAGACGTCGCAACCGACACTTTAACGGAGGTTAACGGTGTGTTGATTGAGTTTGAGATGCGGCGTAGTCTTTGGAGAGTGGATTTCTTTTATGGGGGAATTGAAACGACGACGTCCTTGACGTGGATCTCGGATCAGGAGGGCAAACCGTAG

Protein sequence

MYPIASVHVGHLFQRGTVGPAKTDRILTPGHTASSHGIEGMEKVNKKKTVAIVALSSFQLRQDVATDTLTEVNGVLIEFEMRRSLWRVDFFYGGIETTTSLTWISDQEGKP
Homology
[Close]
BLAST of Csor.00g093460 vs. NCBI nr
Match: KAG6587610.1 (hypothetical protein SDJN03_16175, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (575), Expect = 1.93e-74
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MYPIASVHVGHLFQRGTVGPAKTDRILTPGHTASSHGIEGMEKVNKKKTVAIVALSSFQL 60
           MYPIASVHVGHLFQRGTVGPAKTDRILTPGHTASSHGIEGMEKVNKKKTVAIVALSSFQL
Sbjct: 1   MYPIASVHVGHLFQRGTVGPAKTDRILTPGHTASSHGIEGMEKVNKKKTVAIVALSSFQL 60

Query: 61  RQDVATDTLTEVNGVLIEFEMRRSLWRVDFFYGGIETTTSLTWISDQEGKP 111
           RQDVATDTLTEVNGVLIEFEMRRSLWRVDFFYGGIETTTSLTWISDQEGKP
Sbjct: 61  RQDVATDTLTEVNGVLIEFEMRRSLWRVDFFYGGIETTTSLTWISDQEGKP 111

The following BLAST results are available for this feature:
BLAST of Csor.00g093460 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g093460 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587610.11.93e-74100.00hypothetical protein SDJN03_16175, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g093460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g093460 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g093460.m01Csor.00g093460.m01mRNA