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Csor.00g093280 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCCACGCCGGAACGTCCTCCGTTCGCCAACTCCTGCACCGTGCCCAATACCCTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTTTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGACGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGCGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA ATGGCTTCCTCCACGCCGGAACGTCCTCCGTTCGCCAACTCCTGCACCGTGCCCAATACCCTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTTTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGACGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGCGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA ATGGCTTCCTCCACGCCGGAACGTCCTCCGTTCGCCAACTCCTGCACCGTGCCCAATACCCTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTTTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGACGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGCGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA MASSTPERPPFANSCTVPNTLPTGLLRSVKVLVVLCAKKAAHVTKKLKWKPSPGTTLARPKNVLKTVSLSAMTLFRKKKTSRRGVRPEGDDDEEEKEWGRVGVWQRGILMGDKCQPLDFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA Homology
BLAST of Csor.00g093280 vs. NCBI nr
Match: KAG6587628.1 (hypothetical protein SDJN03_16193, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021587.1 hypothetical protein SDJN02_15313, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318 bits (814), Expect = 1.81e-109 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Csor.00g093280 vs. NCBI nr
Match: XP_022933431.1 (uncharacterized protein LOC111440846 [Cucurbita moschata]) HSP 1 Score: 313 bits (802), Expect = 1.23e-107 Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of Csor.00g093280 vs. NCBI nr
Match: XP_023531310.1 (uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307 bits (786), Expect = 3.38e-105 Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Csor.00g093280 vs. NCBI nr
Match: XP_022973902.1 (uncharacterized protein LOC111472519 [Cucurbita maxima]) HSP 1 Score: 304 bits (778), Expect = 5.62e-104 Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Csor.00g093280 vs. NCBI nr
Match: XP_038879173.1 (uncharacterized protein LOC120071149 [Benincasa hispida]) HSP 1 Score: 195 bits (496), Expect = 5.58e-61 Identity = 106/161 (65.84%), Postives = 118/161 (73.29%), Query Frame = 0
BLAST of Csor.00g093280 vs. ExPASy TrEMBL
Match: A0A6J1EZ09 (uncharacterized protein LOC111440846 OS=Cucurbita moschata OX=3662 GN=LOC111440846 PE=4 SV=1) HSP 1 Score: 313 bits (802), Expect = 5.94e-108 Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of Csor.00g093280 vs. ExPASy TrEMBL
Match: A0A6J1I8S7 (uncharacterized protein LOC111472519 OS=Cucurbita maxima OX=3661 GN=LOC111472519 PE=4 SV=1) HSP 1 Score: 304 bits (778), Expect = 2.72e-104 Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Csor.00g093280 vs. ExPASy TrEMBL
Match: A0A5D3DXW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00220 PE=4 SV=1) HSP 1 Score: 185 bits (469), Expect = 4.06e-57 Identity = 99/159 (62.26%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of Csor.00g093280 vs. ExPASy TrEMBL
Match: A0A0A0LPH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015870 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 1.30e-55 Identity = 99/160 (61.88%), Postives = 114/160 (71.25%), Query Frame = 0
BLAST of Csor.00g093280 vs. ExPASy TrEMBL
Match: A0A6J1C108 (uncharacterized protein LOC111007369 OS=Momordica charantia OX=3673 GN=LOC111007369 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 2.47e-45 Identity = 86/155 (55.48%), Postives = 106/155 (68.39%), Query Frame = 0
BLAST of Csor.00g093280 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20 Identity = 70/171 (40.94%), Postives = 85/171 (49.71%), Query Frame = 0
BLAST of Csor.00g093280 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 7.0e-17 Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 0
BLAST of Csor.00g093280 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05 Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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