Csor.00g093090 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g093090
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLOB domain-containing protein
LocationCsor_Chr11: 1394367 .. 1395177 (-)
RNA-Seq ExpressionCsor.00g093090
SyntenyCsor.00g093090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTATTAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCCATCAGGCCTTGTCTTCAATGGATCAAAACCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTTGCCAAATTCTACGGCCGAGCTGGCCTCGTTAATCTCATCAATGCCGGCCCCGATCATCTCCGCCCTGGTATTTCATCATATTCTACTCTGTTTCAATTACTCTGTTTTCATTGCTCTGTTTCAGTTACCTAAGGCTGTTTTTTGTTTTTTCGGTGTTTCAGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAACCCGATTTATGGGTCGGCCGGACTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTCAAAGGTGCACCGATTCTGTCTGTTTCTTCTGAGACTGCGGTGTCGCACATGGGCCCACCGTTGAAGGGCTGCGACATCCGCCACGTTTCGAAACAGCAAGGCGCCGCCCCCGATTCCGCGCTCCGGAAGATCAAAACACGACGGCGGTTCAAGCGATCGGCGCCCAACAAGCCGATGCCGAAGGAGGAGCCGGTGGTGGTAAATGAGTTCGTATTCGACGATCCGACTCGAGTTGTATCGGAGCCCCGGTGTTTGAAGTTCGAGCTGGATAGTTGGGTGGGCCATAAATCGCTGGAGAAGGACTGCAGCAGCGGCAGCAGCGACGAGGCCGAGTGTTTGTCGGTGGAGGGTTCTGCAGTTGGGCAGGGTGGTGACGTGGAGTTAGAACTTAGCTTGGGGTTATAG

mRNA sequence

ATGCGTATTAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCCATCAGGCCTTGTCTTCAATGGATCAAAACCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTTGCCAAATTCTACGGCCGAGCTGGCCTCGTTAATCTCATCAATGCCGGCCCCGATCATCTCCGCCCTGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAACCCGATTTATGGGTCGGCCGGACTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTCAAAGGTGCACCGATTCTGTCTGTTTCTTCTGAGACTGCGGTGTCGCACATGGGCCCACCGTTGAAGGGCTGCGACATCCGCCACGTTTCGAAACAGCAAGGCGCCGCCCCCGATTCCGCGCTCCGGAAGATCAAAACACGACGGCGGTTCAAGCGATCGGCGCCCAACAAGCCGATGCCGAAGGAGGAGCCGGTGGTGGTAAATGAGTTCGTATTCGACGATCCGACTCGAGTTGTATCGGAGCCCCGGTGTTTGAAGTTCGAGCTGGATAGTTGGGTGGGCCATAAATCGCTGGAGAAGGACTGCAGCAGCGGCAGCAGCGACGAGGCCGAGTGTTTGTCGGTGGAGGGTTCTGCAGTTGGGCAGGGTGGTGACGTGGAGTTAGAACTTAGCTTGGGGTTATAG

Coding sequence (CDS)

ATGCGTATTAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCCATCAGGCCTTGTCTTCAATGGATCAAAACCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTTGCCAAATTCTACGGCCGAGCTGGCCTCGTTAATCTCATCAATGCCGGCCCCGATCATCTCCGCCCTGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAACCCGATTTATGGGTCGGCCGGACTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTCAAAGGTGCACCGATTCTGTCTGTTTCTTCTGAGACTGCGGTGTCGCACATGGGCCCACCGTTGAAGGGCTGCGACATCCGCCACGTTTCGAAACAGCAAGGCGCCGCCCCCGATTCCGCGCTCCGGAAGATCAAAACACGACGGCGGTTCAAGCGATCGGCGCCCAACAAGCCGATGCCGAAGGAGGAGCCGGTGGTGGTAAATGAGTTCGTATTCGACGATCCGACTCGAGTTGTATCGGAGCCCCGGTGTTTGAAGTTCGAGCTGGATAGTTGGGTGGGCCATAAATCGCTGGAGAAGGACTGCAGCAGCGGCAGCAGCGACGAGGCCGAGTGTTTGTCGGTGGAGGGTTCTGCAGTTGGGCAGGGTGGTGACGTGGAGTTAGAACTTAGCTTGGGGTTATAG

Protein sequence

MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSHMGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL
Homology
BLAST of Csor.00g093090 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-62
Identity = 127/242 (52.48%), Postives = 158/242 (65.29%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSE CSIRPCL WIK+P++QANAT FLAKFYGRAGL+NLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRP IF+SLL EACGRIVNPIYGS GLLWSG+WQLCQDAVEAV+KG P+  ++++ A   
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 MGPPLKGCDIRHVSKQQGAAP----DSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVF 180
            GPPLK  DIRH+SK   +A      + L+  KTRR            K    V  +   
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRR-----------AKRVSTVAIQAES 180

Query: 181 DDPTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSL 239
           +  +   S    L  + +    H+   K+  S  S   E L+    AV   G+++L+L+L
Sbjct: 181 EGKSDEASHDSSLSHQSEIVAAHEGESKESESNVS---EVLAFSPPAVKGSGEIKLDLTL 228

BLAST of Csor.00g093090 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.8e-59
Identity = 109/181 (60.22%), Postives = 133/181 (73.48%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSE+CSIRPCLQWIK+ +SQANAT FLAKFYGRAGL+NL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIF+SLL+EACGRIVNPIYGS GLLWSG+W LCQ AVEAV++G+P+  ++ + AV+ 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 MGPPL--KGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDD 180
             PP   K CDIRHVS +       +    K  R  +  +    +  E PV   E   ++
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180

BLAST of Csor.00g093090 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-52
Identity = 105/172 (61.05%), Postives = 126/172 (73.26%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGC++ C+IRPCLQWIK+  SQANAT FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI--LSVSSETAV 120
           LRPAIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G PI    + S +A 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 SHMGPPLKGCDIRHVSKQQGAAPDSA--------LRKIKTRR-RFKRSAPNK 162
             + PP +  DIRHV+K      DS+          K KT+  RFKR + N+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESVNQ 172

BLAST of Csor.00g093090 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.7e-39
Identity = 67/107 (62.62%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 3   ISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           +SCNGCRVLRKGCSE+C +RPC+QWI+T  +Q +AT F+AKF+GRAGL++ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI 110
           PA+F+SLL+EACGR VNP+ G+ G+LW+G+W +CQ AVE VL+G  +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSL 107

BLAST of Csor.00g093090 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 66/107 (61.68%), Postives = 91/107 (85.05%), Query Frame = 0

Query: 3   ISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           +SCNGCRVLRKGCSE+C +RPC+QWI++P++Q +AT F+AKF+GRAGL++ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI 110
           PA+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSL 107

BLAST of Csor.00g093090 vs. NCBI nr
Match: KAG6587647.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483 bits (1243), Expect = 3.96e-172
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT
Sbjct: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL
Sbjct: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238

BLAST of Csor.00g093090 vs. NCBI nr
Match: XP_022933273.1 (LOB domain-containing protein 40-like [Cucurbita moschata])

HSP 1 Score: 474 bits (1220), Expect = 1.35e-167
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 67  MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 126

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH
Sbjct: 127 LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 186

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT
Sbjct: 187 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 246

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           RVVSEPRCLKFELDSWVGHKS EKDCSS SSDEAECLSVEGSAVGQGGDVELELSLGL
Sbjct: 247 RVVSEPRCLKFELDSWVGHKSQEKDCSS-SSDEAECLSVEGSAVGQGGDVELELSLGL 303

BLAST of Csor.00g093090 vs. NCBI nr
Match: XP_023531745.1 (LOB domain-containing protein 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462 bits (1188), Expect = 9.43e-163
Identity = 229/238 (96.22%), Postives = 231/238 (97.06%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 67  MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 126

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPA+FKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETA SH
Sbjct: 127 LRPAVFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAASH 186

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLK CDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMP+EEPVVV EFVFDDPT
Sbjct: 187 MGPPLKDCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPEEEPVVVTEFVFDDPT 246

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           RVVSEPRCLKFELDSWVGHKS EKDCSS   DEAECLSVEGSAVGQGGDVELELSLGL
Sbjct: 247 RVVSEPRCLKFELDSWVGHKSQEKDCSS---DEAECLSVEGSAVGQGGDVELELSLGL 301

BLAST of Csor.00g093090 vs. NCBI nr
Match: XP_023006009.1 (LOB domain-containing protein 41-like [Cucurbita maxima])

HSP 1 Score: 450 bits (1157), Expect = 5.12e-159
Identity = 221/238 (92.86%), Postives = 228/238 (95.80%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGL+NLINAGPDH
Sbjct: 1   MRLSCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLLNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSE+A SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSESAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLKGCDIRHVS+QQG+APDSAL+KIKTRRR KRSAPNKPMPKEEPVVV EF FDDPT
Sbjct: 121 MGPPLKGCDIRHVSRQQGSAPDSALQKIKTRRRLKRSAPNKPMPKEEPVVVTEFAFDDPT 180

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           R+VSEPRCL FELDSWVGHKS EKD SSGSSDEAECLSVEGSAV Q GDVELELSLGL
Sbjct: 181 RIVSEPRCLMFELDSWVGHKSQEKDGSSGSSDEAECLSVEGSAVEQVGDVELELSLGL 238

BLAST of Csor.00g093090 vs. NCBI nr
Match: XP_038898929.1 (LOB domain-containing protein 41-like [Benincasa hispida])

HSP 1 Score: 401 bits (1030), Expect = 1.49e-139
Identity = 206/241 (85.48%), Postives = 216/241 (89.63%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSE+CSIRPCLQWIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSEACSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVV-NEFVFDDP 180
           MGPPLKGCDIRHVSKQQG+A DSALRKIKTRRRFKRSA  K  PK+EPVVV  EF FDDP
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASDSALRKIKTRRRFKRSAA-KLKPKQEPVVVVPEFKFDDP 180

Query: 181 TRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVE---GSAVGQGGDVELELSL 237
           TR VSEPRCLKFELD+W   +S EKDC S   D+ ECLSVE    S VGQGGDVELEL+L
Sbjct: 181 TRTVSEPRCLKFELDNWESRESPEKDCGS---DDTECLSVETVEASPVGQGGDVELELTL 237

BLAST of Csor.00g093090 vs. ExPASy TrEMBL
Match: A0A6J1F4A2 (LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440342 PE=3 SV=1)

HSP 1 Score: 474 bits (1220), Expect = 6.53e-168
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 67  MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 126

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH
Sbjct: 127 LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 186

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT
Sbjct: 187 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 246

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           RVVSEPRCLKFELDSWVGHKS EKDCSS SSDEAECLSVEGSAVGQGGDVELELSLGL
Sbjct: 247 RVVSEPRCLKFELDSWVGHKSQEKDCSS-SSDEAECLSVEGSAVGQGGDVELELSLGL 303

BLAST of Csor.00g093090 vs. ExPASy TrEMBL
Match: A0A6J1L0Y6 (LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111498884 PE=3 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 2.48e-159
Identity = 221/238 (92.86%), Postives = 228/238 (95.80%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGL+NLINAGPDH
Sbjct: 1   MRLSCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLLNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSE+A SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSESAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDDPT 180
           MGPPLKGCDIRHVS+QQG+APDSAL+KIKTRRR KRSAPNKPMPKEEPVVV EF FDDPT
Sbjct: 121 MGPPLKGCDIRHVSRQQGSAPDSALQKIKTRRRLKRSAPNKPMPKEEPVVVTEFAFDDPT 180

Query: 181 RVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLGL 238
           R+VSEPRCL FELDSWVGHKS EKD SSGSSDEAECLSVEGSAV Q GDVELELSLGL
Sbjct: 181 RIVSEPRCLMFELDSWVGHKSQEKDGSSGSSDEAECLSVEGSAVEQVGDVELELSLGL 238

BLAST of Csor.00g093090 vs. ExPASy TrEMBL
Match: A0A0A0LPS5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 2.22e-136
Identity = 199/239 (83.26%), Postives = 211/239 (88.28%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSESCSIRPCLQWIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEP--VVVNEFVFDD 180
           MGPPLKGCDIRHVSKQQ +A  SA+RKIKTRRRFKRS   K  PKEEP  VVV EF FDD
Sbjct: 121 MGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTAKLKPKEEPSVVVVPEFKFDD 180

Query: 181 PTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLG 237
            T++VSEP+CLKFELD+W G +S EKDC S   D+ ECLSVE     QGGDVELEL+LG
Sbjct: 181 QTQIVSEPQCLKFELDNWKGRESPEKDCGS---DDTECLSVETVEGCQGGDVELELTLG 236

BLAST of Csor.00g093090 vs. ExPASy TrEMBL
Match: A0A5A7UQD2 (LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00550 PE=3 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 4.64e-136
Identity = 200/240 (83.33%), Postives = 212/240 (88.33%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSESCSIRPCLQWIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAP-NKPMPKEEP--VVVNEFVFD 180
           MGPPLKGCDIRHVSKQQG+A  SA+RKIKTRRRFKRS   NK  PKEEP  V V EF+FD
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKRSGTANKLKPKEEPGVVAVPEFIFD 180

Query: 181 DPTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLG 237
           D TR+VSEPRCLKFELD+W G +  EK+C S   D+ ECLSVE     QGGDVELEL+LG
Sbjct: 181 DQTRIVSEPRCLKFELDNWKGGEWPEKECGS---DDTECLSVETVEGCQGGDVELELTLG 237

BLAST of Csor.00g093090 vs. ExPASy TrEMBL
Match: A0A1S3BXA9 (LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE=3 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 4.64e-136
Identity = 200/240 (83.33%), Postives = 212/240 (88.33%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSESCSIRPCLQWIK+PQSQANATFFLAKFYGRAGLVNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAPIL VSSETA SH
Sbjct: 61  LRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASH 120

Query: 121 MGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAP-NKPMPKEEP--VVVNEFVFD 180
           MGPPLKGCDIRHVSKQQG+A  SA+RKIKTRRRFKRS   NK  PKEEP  V V EF+FD
Sbjct: 121 MGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKRSGTANKLKPKEEPGVVAVPEFIFD 180

Query: 181 DPTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSLG 237
           D TR+VSEPRCLKFELD+W G +  EK+C S   D+ ECLSVE     QGGDVELEL+LG
Sbjct: 181 DQTRIVSEPRCLKFELDNWKGGEWPEKECGS---DDTECLSVETVEGCQGGDVELELTLG 237

BLAST of Csor.00g093090 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63
Identity = 127/242 (52.48%), Postives = 158/242 (65.29%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSE CSIRPCL WIK+P++QANAT FLAKFYGRAGL+NLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRP IF+SLL EACGRIVNPIYGS GLLWSG+WQLCQDAVEAV+KG P+  ++++ A   
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 MGPPLKGCDIRHVSKQQGAAP----DSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVF 180
            GPPLK  DIRH+SK   +A      + L+  KTRR            K    V  +   
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRR-----------AKRVSTVAIQAES 180

Query: 181 DDPTRVVSEPRCLKFELDSWVGHKSLEKDCSSGSSDEAECLSVEGSAVGQGGDVELELSL 239
           +  +   S    L  + +    H+   K+  S  S   E L+    AV   G+++L+L+L
Sbjct: 181 EGKSDEASHDSSLSHQSEIVAAHEGESKESESNVS---EVLAFSPPAVKGSGEIKLDLTL 228

BLAST of Csor.00g093090 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-60
Identity = 109/181 (60.22%), Postives = 133/181 (73.48%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MR+SCNGCRVLRKGCSE+CSIRPCLQWIK+ +SQANAT FLAKFYGRAGL+NL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPILSVSSETAVSH 120
           LRPAIF+SLL+EACGRIVNPIYGS GLLWSG+W LCQ AVEAV++G+P+  ++ + AV+ 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 MGPPL--KGCDIRHVSKQQGAAPDSALRKIKTRRRFKRSAPNKPMPKEEPVVVNEFVFDD 180
             PP   K CDIRHVS +       +    K  R  +  +    +  E PV   E   ++
Sbjct: 121 QAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEE 180

BLAST of Csor.00g093090 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 105/172 (61.05%), Postives = 126/172 (73.26%), Query Frame = 0

Query: 1   MRISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDH 60
           MRISCNGCRVLRKGC++ C+IRPCLQWIK+  SQANAT FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI--LSVSSETAV 120
           LRPAIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G PI    + S +A 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 SHMGPPLKGCDIRHVSKQQGAAPDSA--------LRKIKTRR-RFKRSAPNK 162
             + PP +  DIRHV+K      DS+          K KT+  RFKR + N+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESVNQ 172

BLAST of Csor.00g093090 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 161.8 bits (408), Expect = 6.9e-40
Identity = 67/107 (62.62%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 3   ISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           +SCNGCRVLRKGCSE+C +RPC+QWI+T  +Q +AT F+AKF+GRAGL++ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI 110
           PA+F+SLL+EACGR VNP+ G+ G+LW+G+W +CQ AVE VL+G  +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSL 107

BLAST of Csor.00g093090 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 66/107 (61.68%), Postives = 91/107 (85.05%), Query Frame = 0

Query: 3   ISCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLVNLINAGPDHLR 62
           +SCNGCRVLRKGCSE+C +RPC+QWI++P++Q +AT F+AKF+GRAGL++ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAPI 110
           PA+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  +
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSL 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M8866.3e-6252.48LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S... [more]
Q9ZW963.8e-5960.22LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S... [more]
Q9CA302.6e-5261.05LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S... [more]
Q9FN119.7e-3962.62LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S... [more]
Q9SN232.8e-3861.68LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S... [more]
Match NameE-valueIdentityDescription
KAG6587647.13.96e-172100.00LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_022933273.11.35e-16799.16LOB domain-containing protein 40-like [Cucurbita moschata][more]
XP_023531745.19.43e-16396.22LOB domain-containing protein 40-like [Cucurbita pepo subsp. pepo][more]
XP_023006009.15.12e-15992.86LOB domain-containing protein 41-like [Cucurbita maxima][more]
XP_038898929.11.49e-13985.48LOB domain-containing protein 41-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1F4A26.53e-16899.16LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440... [more]
A0A6J1L0Y62.48e-15992.86LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC11149888... [more]
A0A0A0LPS52.22e-13683.26LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV... [more]
A0A5A7UQD24.64e-13683.33LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3BXA94.64e-13683.33LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE... [more]
Match NameE-valueIdentityDescription
AT3G02550.14.5e-6352.48LOB domain-containing protein 41 [more]
AT1G67100.12.7e-6060.22LOB domain-containing protein 40 [more]
AT1G68510.11.9e-5361.05LOB domain-containing protein 42 [more]
AT5G67420.16.9e-4062.62LOB domain-containing protein 37 [more]
AT3G49940.12.0e-3961.68LOB domain-containing protein 38 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 4..102
e-value: 8.5E-23
score: 80.8
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 3..109
score: 16.076696
NoneNo IPR availablePANTHERPTHR31304LOB DOMAIN-CONTAINING PROTEIN 38coord: 1..175
NoneNo IPR availablePANTHERPTHR31304:SF9LOB DOMAIN-CONTAINING PROTEIN 40coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g093090.m01Csor.00g093090.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression