Csor.00g092430 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGCTCTTCATCTCTGCTACATTCTCCAGTTTTCTTCTTTTTCCTGGGGATGCTAGTTGTGCTGGTGATCTTGTTGATTCTCATATTGATTTTTAGGAAATTTCTCAAACCGAATACAGTGGTGAAGCTATTAAGACCAACAGGAACAACTCAAGGTAACAGAGTTAATTGTTAGATCTGAAGAAACTAGTAATGTTTATAAAACTGCAAAAAAGTAAGTGCTTTCACCTCACGTTGCAGCATCGGCAGATTTGTTAAGCGAAAATCTCCACTCAATAAGTTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTGATCCGGCAAATCTTCTAGGCCTGGGAGGATTTGGACCCGTCTATCTGGTATGAGTTTCCTTCACTAGAATAATTGATGCATATGAATTCTTTCCTGTTACATTTGCACCATCATGTGAAAAGGGTCTATATTGGGTAAGTGCATAAAAATGATTGGAACCTCATGCCAAAATTTATGATATAATTTGGGCAAAAGATCAACCTAACACTCCCTCTTGTTGAAGTATTCTATTCCGTAGAAACTTAGCTTAGGACTAAATGGGAACCTACCCTTATAGGGAACGCTAGAAGATGGAAGATTGGTAGCAATTAAGAAACTTTCACTAAACAAATCCCAACAAGGAGAACCAGAGTTTCTATCAGAGGTCAGACTGATAACAAGCATCCAACACAAGAACCTGGTTCGCCTGCTCGGTTGTTGCTCAGATGGGCCTCAACGGCTACTCGTGTATGAATACATGGAGAACAAGAGTTTGGATCTCATAATATATGGTAGTACTAGTAGTCCTTCTCAATCTGATGTGATCTTCCCTGCCCTTTACCTTACAAGACAATAACGTTGTATATCACAATTGGTACAAAACAGGGGTAAGCGATCAATTCCTCAACTGGAATACCAGATTGAAGATTATCAGAGGCATTGCCAAAGGGTTGCAGTATCTACATGAGGATTCCCATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAGATTTCAGCCAAAGATTGGAGATTTTGGGTTGGCCAGATTCTTCCCAGATGACCAAGCTTACCTAAGCACTACATTTGCTGGAACTCTGTAAGCTTTTCGTCTAATTTCATTTACTGTCAGGCACATCTTATAAATTAAAGCTTTATCACATGCCCTTCATTTGTTCAGAGGCTACACAGCACCAGAATATGCAATTAGGGGAGAACTGTCAGAAAAGGCAGATGTATACAGTTTTGGAGTTCTTGTACTTGAAATCATCAGTGGCAGAAAAAACACAAATCTTTCTCTACCAACAGAAATGCAGTATCTTCCAGAATATGTACGTATAAAATCCCACAACTATGTCCAGTATTTATCAATTTCTAAGGTATTCAGATATGACTATTTAACCATACTAATATACAGGCATGGAAACTATATGAGAGGTCTGCACTAATCGAGCTTGTGGATCCAAAGATGAAGGATGATGGATATGTGGAGAAGAATGTAGTACATGTAATTCAGGTTGCTTTGTTATGCCTTCAGCCTCATGGCGACCTGAGACCTGCAATGTCTGAGATTGTTGCCATGTTAACATACAAATTTGAAATCATTCAAACACCTTTGAAACCAGCCTTCTTGGAAAGAAGGCCTAAAAGGAACAGAGATCTCTCGTTGACTAATCATGCAGATACCATTCCTTCTCCATTACAGTGA ATGAAGAGCTCTTCATCTCTGCTACATTCTCCAGTTTTCTTCTTTTTCCTGGGGATGCTAGTTGTGCTGGTGATCTTGTTGATTCTCATATTGATTTTTAGGAAATTTCTCAAACCGAATACAGTGGTGAAGCTATTAAGACCAACAGGAACAACTCAAGCATCGGCAGATTTGTTAAGCGAAAATCTCCACTCAATAAGTTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTGATCCGGCAAATCTTCTAGGCCTGGGAGGATTTGGACCCGTCTATCTGGGAACGCTAGAAGATGGAAGATTGGTAGCAATTAAGAAACTTTCACTAAACAAATCCCAACAAGGAGAACCAGAGTTTCTATCAGAGGCATGGAAACTATATGAGAGGTCTGCACTAATCGAGCTTGTGGATCCAAAGATGAAGGATGATGGATATGTGGAGAAGAATGTAGTACATGTAATTCAGGTTGCTTTGTTATGCCTTCAGCCTCATGGCGACCTGAGACCTGCAATGTCTGAGATTGTTGCCATGTTAACATACAAATTTGAAATCATTCAAACACCTTTGAAACCAGCCTTCTTGGAAAGAAGGCCTAAAAGGAACAGAGATCTCTCGTTGACTAATCATGCAGATACCATTCCTTCTCCATTACAGTGA ATGAAGAGCTCTTCATCTCTGCTACATTCTCCAGTTTTCTTCTTTTTCCTGGGGATGCTAGTTGTGCTGGTGATCTTGTTGATTCTCATATTGATTTTTAGGAAATTTCTCAAACCGAATACAGTGGTGAAGCTATTAAGACCAACAGGAACAACTCAAGCATCGGCAGATTTGTTAAGCGAAAATCTCCACTCAATAAGTTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTGATCCGGCAAATCTTCTAGGCCTGGGAGGATTTGGACCCGTCTATCTGGGAACGCTAGAAGATGGAAGATTGGTAGCAATTAAGAAACTTTCACTAAACAAATCCCAACAAGGAGAACCAGAGTTTCTATCAGAGGCATGGAAACTATATGAGAGGTCTGCACTAATCGAGCTTGTGGATCCAAAGATGAAGGATGATGGATATGTGGAGAAGAATGTAGTACATGTAATTCAGGTTGCTTTGTTATGCCTTCAGCCTCATGGCGACCTGAGACCTGCAATGTCTGAGATTGTTGCCATGTTAACATACAAATTTGAAATCATTCAAACACCTTTGAAACCAGCCTTCTTGGAAAGAAGGCCTAAAAGGAACAGAGATCTCTCGTTGACTAATCATGCAGATACCATTCCTTCTCCATTACAGTGA MKSSSSLLHSPVFFFFLGMLVVLVILLILILIFRKFLKPNTVVKLLRPTGTTQASADLLSENLHSISYFDFHTLKKATKNFDPANLLGLGGFGPVYLGTLEDGRLVAIKKLSLNKSQQGEPEFLSEAWKLYERSALIELVDPKMKDDGYVEKNVVHVIQVALLCLQPHGDLRPAMSEIVAMLTYKFEIIQTPLKPAFLERRPKRNRDLSLTNHADTIPSPLQ Homology
BLAST of Csor.00g092430 vs. ExPASy Swiss-Prot
Match: O64780 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 OS=Arabidopsis thaliana OX=3702 GN=At1g61400 PE=3 SV=4) HSP 1 Score: 72.8 bits (177), Expect = 5.5e-12 Identity = 33/70 (47.14%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy Swiss-Prot
Match: O64778 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana OX=3702 GN=At1g61420 PE=3 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy Swiss-Prot
Match: Q9SYA0 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61500 OS=Arabidopsis thaliana OX=3702 GN=At1g61500 PE=2 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10 Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy Swiss-Prot
Match: O64781 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS=Arabidopsis thaliana OX=3702 GN=At1g61390 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy Swiss-Prot
Match: O64784 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana OX=3702 GN=At1g61360 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.0e-10 Identity = 39/110 (35.45%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Csor.00g092430 vs. NCBI nr
Match: KAG6587713.1 (G-type lectin S-receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 425 bits (1093), Expect = 8.57e-150 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Csor.00g092430 vs. NCBI nr
Match: KAG7021680.1 (Cysteine-rich receptor-like protein kinase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352 bits (902), Expect = 1.06e-120 Identity = 191/222 (86.04%), Postives = 192/222 (86.49%), Query Frame = 0
BLAST of Csor.00g092430 vs. NCBI nr
Match: XP_023530971.1 (putative serine/threonine-protein kinase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 341 bits (875), Expect = 6.91e-114 Identity = 214/392 (54.59%), Postives = 218/392 (55.61%), Query Frame = 0
BLAST of Csor.00g092430 vs. NCBI nr
Match: XP_038879107.1 (putative serine/threonine-protein kinase [Benincasa hispida]) HSP 1 Score: 308 bits (788), Expect = 6.94e-101 Identity = 197/392 (50.26%), Postives = 207/392 (52.81%), Query Frame = 0
BLAST of Csor.00g092430 vs. NCBI nr
Match: XP_008453534.1 (PREDICTED: putative serine/threonine-protein kinase [Cucumis melo]) HSP 1 Score: 296 bits (758), Expect = 3.60e-96 Identity = 193/392 (49.23%), Postives = 205/392 (52.30%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy TrEMBL
Match: A0A1S3BX99 (putative serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103494217 PE=4 SV=1) HSP 1 Score: 296 bits (758), Expect = 1.74e-96 Identity = 193/392 (49.23%), Postives = 205/392 (52.30%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy TrEMBL
Match: A0A6J1C042 (putative serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111007063 PE=4 SV=1) HSP 1 Score: 295 bits (756), Expect = 3.19e-96 Identity = 195/391 (49.87%), Postives = 203/391 (51.92%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy TrEMBL
Match: A0A5A7USQ2 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001990 PE=4 SV=1) HSP 1 Score: 295 bits (756), Expect = 4.46e-96 Identity = 193/394 (48.98%), Postives = 205/394 (52.03%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy TrEMBL
Match: A0A6J1KNU3 (putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=LOC111497330 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 1.95e-89 Identity = 179/359 (49.86%), Postives = 183/359 (50.97%), Query Frame = 0
BLAST of Csor.00g092430 vs. ExPASy TrEMBL
Match: A0A7J6VUK6 (Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_021626 PE=4 SV=1) HSP 1 Score: 221 bits (564), Expect = 3.21e-69 Identity = 118/214 (55.14%), Postives = 157/214 (73.36%), Query Frame = 0
BLAST of Csor.00g092430 vs. TAIR 10
Match: AT1G61420.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Csor.00g092430 vs. TAIR 10
Match: AT1G61390.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Csor.00g092430 vs. TAIR 10
Match: AT1G61500.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Csor.00g092430 vs. TAIR 10
Match: AT1G61390.2 (S-locus lectin protein kinase family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Csor.00g092430 vs. TAIR 10
Match: AT1G61360.1 (S-locus lectin protein kinase family protein ) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11 Identity = 39/110 (35.45%), Postives = 66/110 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|