Csor.00g090940 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g090940
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 2449744 .. 2450137 (+)
RNA-Seq ExpressionCsor.00g090940
SyntenyCsor.00g090940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGGTAAAGTAATTTTATCTTTAATCTTCCTATTCCTCTGTTTCTTCGAGTTTTCAGTTCGTTATAATGTCTGTTTATGTTCTGTATACAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGA

mRNA sequence

ATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGA

Coding sequence (CDS)

ATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGA

Protein sequence

MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV
Homology
[Close]
BLAST of Csor.00g090940 vs. NCBI nr
Match: KAG6587862.1 (hypothetical protein SDJN03_16427, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (528), Expect = 1.37e-67
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSI 60
           MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSI
Sbjct: 1   MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSI 60

Query: 61  VGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV 101
           VGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV
Sbjct: 61  VGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV 101

[Close]
BLAST of Csor.00g090940 vs. NCBI nr
Match: KAG7021750.1 (hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126 bits (316), Expect = 5.58e-33
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 39  ERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGT 98
           +RLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGT
Sbjct: 235 KRLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGT 294

Query: 99  FEV 101
           FEV
Sbjct: 295 FEV 297

The following BLAST results are available for this feature:
BLAST of Csor.00g090940 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g090940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587862.11.37e-67100.00hypothetical protein SDJN03_16427, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7021750.15.58e-3398.41hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g090940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g090940 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g090940.m01Csor.00g090940.m01mRNA