Csor.00g090900 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g090900
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 2462418 .. 2462738 (+)
RNA-Seq ExpressionCsor.00g090900
SyntenyCsor.00g090900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCGAGATCATTGAACGTAGCAGGTCTTGTATTTGTAGTTTACATGTTCATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCACAGGTGGCAAAGGATATGCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCACCTCAGCTTCTCAAAGCCATTCCCCCGGTTACCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

mRNA sequence

ATGGCGCCGAGATCATTGAACGTAGCAGGTCTTGTATTTGTAGTTTACATGTTCATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCACAGGTGGCAAAGGATATGCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCACCTCAGCTTCTCAAAGCCATTCCCCCGGTTACCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

Coding sequence (CDS)

ATGGCGCCGAGATCATTGAACGTAGCAGGTCTTGTATTTGTAGTTTACATGTTCATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCACAGGTGGCAAAGGATATGCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCACCTCAGCTTCTCAAAGCCATTCCCCCGGTTACCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

Protein sequence

MAPRSLNVAGLVFVVYMFMLVPTAVARMGAVAQVAKDMPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSIP
Homology
BLAST of Csor.00g090900 vs. NCBI nr
Match: KAG6587866.1 (hypothetical protein SDJN03_16431, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209 bits (531), Expect = 6.91e-68
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query: 1   MAPRSLNVAGLVFVVYMFMLVPTAVARMGAVAQVAKDMPLNDCTTFVSESAKCMTDVFTN 60
           MAPRSLNVAGLVFVVYMFMLVPTAVARMGAVAQVAKDMPLNDCTTFVSESAKCMTDVFTN
Sbjct: 1   MAPRSLNVAGLVFVVYMFMLVPTAVARMGAVAQVAKDMPLNDCTTFVSESAKCMTDVFTN 60

Query: 61  AAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSIP 106
           AAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSIP
Sbjct: 61  AAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSIP 106

BLAST of Csor.00g090900 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.32e-21
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 11  LVFVVYMFMLVPTAVARMGAVAQ----VAKDMPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A      A+++ L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Csor.00g090900 vs. NCBI nr
Match: KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 3.76e-21
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 11  LVFVVYMFMLVPTAVARMGAVAQ----VAKDMPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A      A+ + L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Csor.00g090900 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.24e-19
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 11  LVFVVYMFMLVPTAVARMGAVAQV----AKDMPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF+V + +L  + +A  GA+A      A++  L  CT+F+SE+  CM DV  NA APHP
Sbjct: 8   LVFLVCIAILAVSGMAHTGALAPADPFTAEEFSLLGCTSFISEATNCMVDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGV 103
           SCC+AF++LN CS + LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSSEFLKGIPSADMILIKGICALWGV 104

BLAST of Csor.00g090900 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 8.82e-18
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  FMLVPTAVARMGAVAQVAK--DMPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAEL 77
           F+L  + +AR   VA  A   D+ L  C +FV ++ +C+ DV  NA APHPSCCQA +EL
Sbjct: 17  FILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISEL 76

Query: 78  NQCSPQLLKAIPPVTLDLIRKVCELMGVSI 105
           + CS Q LK IP V + L++ +C L GVSI
Sbjct: 77  HDCSSQFLKDIPSVDMILVKSICALWGVSI 106

BLAST of Csor.00g090900 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.38e-22
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 11  LVFVVYMFMLVPTAVARMGAVAQ----VAKDMPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A      A+++ L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Csor.00g090900 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.82e-21
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 11  LVFVVYMFMLVPTAVARMGAVAQ----VAKDMPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A      A+ + L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Csor.00g090900 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.27e-18
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  FMLVPTAVARMGAVAQVAK--DMPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAEL 77
           F+L  + +AR   VA  A   D+ L  C +FV ++ +C+ DV  NA APHPSCCQA +EL
Sbjct: 17  FILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISEL 76

Query: 78  NQCSPQLLKAIPPVTLDLIRKVCELMGVSI 105
           + CS Q LK IP V + L++ +C L GVSI
Sbjct: 77  HDCSSQFLKDIPSVDMILVKSICALWGVSI 106

BLAST of Csor.00g090900 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.27e-18
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  FMLVPTAVARMGAVAQVAK--DMPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAEL 77
           F+L  + +AR   VA  A   D+ L  C +FV ++ +C+ DV  NA APHPSCCQA +EL
Sbjct: 17  FILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISEL 76

Query: 78  NQCSPQLLKAIPPVTLDLIRKVCELMGVSI 105
           + CS Q LK IP V + L++ +C L GVSI
Sbjct: 77  HDCSSQFLKDIPSVDMILVKSICALWGVSI 106

BLAST of Csor.00g090900 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.94e-16
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0

Query: 1   MAPRSLNVAGLVFVVYMFMLVPTAVAR---MGAVAQVAKDMPLNDCTTFVSESAKCMTDV 60
           MA  ++    LV +V + +L  +  AR   + A    ++D  L  C +FV ++ KC+ DV
Sbjct: 1   MATSAITKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDV 60

Query: 61  FTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSI 105
             NA APHPSCC+A ++L+ CS Q LK IP   + L++ +C   GVSI
Sbjct: 61  LKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSI 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6587866.16.91e-68100.00hypothetical protein SDJN03_16431, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK10330.11.32e-2148.45hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa][more]
KAA0050078.13.76e-2148.45hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa][more]
KAE8653021.11.24e-1946.39hypothetical protein Csa_004567 [Cucumis sativus][more]
KAA0050065.18.82e-1847.78hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CG416.38e-2248.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4831.82e-2148.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8Y34.27e-1847.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEQ44.27e-1847.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CFS62.94e-1638.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 42..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g090900.m01Csor.00g090900.m01mRNA