Csor.00g090870 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g090870
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRING-type domain-containing protein
LocationCsor_Chr11: 2472854 .. 2479996 (+)
RNA-Seq ExpressionCsor.00g090870
SyntenyCsor.00g090870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCCCGTGGTTAATGTCGGTGGCACAGCACGGAGGCCTACGGTGGCTCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCTCCTCCCAGATCTCACCCACCGAACTTCAGTTTTAGCTACTTCCCCAATTCCCTCGATCTACAGCTGGCACTGTGGGTCCGCTCATTAATACCCCTGTTTCCAAACAAAGATTATTTATGTCATTATTTATTGTCGCTCTCATATCATCGAGTGATTATTCTTTTAATTTTTAAACAATTTTTTTAATTTTAAAATATTTAAAAAATCAATAATAATATTACCATGAGTAATTTTTAAACCGTATTGCCTATAACGTCAACAGATATTTATTAATAAAAATATATGGGTTATAGTAAAAAAGTTTTAAACGTTCGTAGATAAAAAAAACAAGAATAGAAAATTCTAAAGAAACTTGAAATAAATTAAGTTGGTCCACTTAATAAAGTAACATGAATTATTTTTAAAAAAAATTAATGTAAGGTTGTTGGATTATTGTCGTAATAGGAGGATAACCATTAATTATAAGTTCTACTTATACACGTAAGTTTTTAGCTTGCATATTTAAAAAATTAATATTAATATATGGTAATGTGTTAAAATGCTAAGATAGAATTGGATGTTAATTCTCGTGTCACACAATACATTCAATGAACCAATACTATAATTAATCATTAATTTTAAAAAATAAAAGTTATATATGAAAAAAAGGAAAAAAGAATTAAAAGGCAGGCAATGATTGCTACATTTAGGATGGAAGAAACATATCAACAACGTTAAAAGGATGAAATATCACATTCAAACCTAATTGAATTTTCATGTGATAATATGTGACATTTTTTTTTTCTTTAGACAATTTCATGTGACTTACCTCAAACATTCTAAACATGTGAACTTGGTCTCTAACTTTGCCTTTTCTTTTCTTAATTTCAATCCCCCAAACCTTAAAATATTTTGTCCTTATATTTAACCTTAAATTAGACCGTGTTATTTGTTAGGAATAATAATTAGTGTGCCCACATGGATTTTCTCAAAGTTCACATTGCTGTCACGTGAGAAGGTTGGCGGCAACCAAATTTATTCGGCCATTAGGATCGAAAGCGAAAGAGCTAACTAAATAAACTACTTAACTCAATTTGAACGGTGTAAAGTGTCTCGATCATTCTTACATATTTCTAGCCAATCCTATATTGATTTTTTTTTTTTTTTTTTTTTTGCACATTAATAGATTTCCTCTATAAAAGTAGTTTTTAAAGGTTTATTATGATATTTGAGTAAAGAATAGGTACATTGATGAATCGTTACCACATGCAAATGAGAGTGATCTTCGCGATAGGACGACTAAGAATGACTTAAAAGATGTATCTTTTTTTTCGTTGGCTCAATCGTAGGAACTTCATGGTTAAATGTGTTTTGCCTGAAGCAATTTTTTGTTTAGTAACCTCATCAAAACTTTCCTGTGATGCACGTGAGTGAGTACAAAGCGTGCTGAAAAGAATTGTGTTGGTATGCGGGGATAGTCTTCGCTTCTAAGAGAGGCTACGTGAATTGACGGAGACAATATCTACGATCCTTAAGAGTTTTTATACGATGCATGCGAGTGAGAACAAAATATCTTAAAAGGGTTTTGTACTGGTCTATATTTTGAAAAGATTTATGTTGGTACGTGGGAATAACGTAACTATGTTACAAGATGTGGAGAGAAATGTTACTGTCATCGAGTTGTATTACGGAGAATATTATTAATGTAACTTTTAAAAGAATAAAAAAGGGATCCGAAAGGAATATACATGAGAGAGCCATTGTGGAAAAAAGCTCCAAAAAGGGTATTGAATGAAAGGAGAAGGTTTATGACGAAGGTGGGGCCCTTAAATTCCCGAAAAGGGCAGTACCCTTTAGCCGAAGAAACAAGGGAAGTACTAGGTTGTTGAAGGGACAAATGAGTAAATTAGGGTGTGTCGTCCATTGGCCATAAGGGTATTTTGGACTATTCCTAGTTAAGCTGTCCCAAAAGATAAGGGATCCTATCCCTTCCAGCGGTTCGAGGATAGACCAGAACCAAAAGCTTTCTACAACTTGCTTGACGTTATCACCTCCAAATTTCCGCCACTCTATAATTTCCATTTTTTTTTTTCTCTCTTTCGTAATTTGAATTTTTTAGAATATTATATAAAAGTCAATATAAAGTTTTTAATATTAATTTTGTTGAATTTTATGAGTTTATTATTCGTTAGTCTATGGGCAATCTTTTAATTTTATTTTTATATTCAATATATGTTTTATAATATTATAATGTAAAAGATTTTCCTTTTATATATAATATTTATTCTTATTGTACAAAAACGTTTCTATTTATTTTCTGTATTTTAAATTTTGTAATAACATTAATGAAATATCAAATAGTTTGGTAGAATTTAATCTTCATCGAAGGAATCCTTTTTAACCCATTTAAATACGTCCAAATCTAAGATAAATTTATTATTATTATACAAAACATGAATTAATTAACGATATTATGAGATTTTTATTATAATAATACCAACTTTGGTTAGATGGGAATAATATAATTAATGGGTTAATTGAATTCATAATTATTTTTTCACAATAAGTGAAATTTACTCAAAAGTATAGATTATTGTGAAAAAAACAGCTAGCCTCACCAAATTTTAAATTTCAGTTTTTTTATTTTACTAAAAAAATTGTTTTTTAATTGTAAGTCAAAACATATGAATAGGTAAAATTAATATATATTTTTTAAGAATTTTATTTTATTTTTGTAGGGAAAAAGCTGATTATTTTATTTAATACAGCCGCAGAAAACGATGGAAATTACTAAAATATCTCAATTTATTTTATTTAATAAAATGAATAATAATAATAAGTGGAATACAACCCACCAATTTCCTTTTTTGAAAAGAAAATAAATAAATATTTGAAAAAATCACATAACACAAATTTTTATTTGTTGCGTGCAAGATTAAAATAATGTGAAAATAAACCATTATTGACTCGGTCAAAGTCGCTATTTGAATAAACTTTTCCACGTGTTATCTTAATCCAAAGATTTAATTTTATGGTTATCCTAATCTAAAGCTAAACATGGTCTTCTTTTATTATTAACTTAATCTAAAGCTAACCTTTTTATTTAGATGATATTGGGCTTACAAATTCTGGGTGGGCCCAAAATATGTACGAGGCTTAAGACAGTAGGCCCATCTAGTAGCTGTAAGACAAAGCATGCATCAGTCTCGTATAACGTAGGCCCACCAAAGCAGGCCCGGCCCAATAAACTCTTTGGATCTCAATAACAATCTCGATGAAATTGTTACTTTTATTTTGTAATATTTTTTTTATAAATAATATATATTCTTTAATTTTTTTAAAAACTAAAATTAACATATACCAATGGAAAATCAATTAATAGGATAAAATTTATGGATATAGAATAAAAGGATTATTTAAAATATTAGAAAAAGTAAATAAAAATATGTATTTATTATTGTAAATTATTATCTTTGTTATTTGATGGTTATTTATCAAAATCAGCTTTTCCAAAAAAATAAATAAATAATAACAAAATAGAAAAATCAGAATTTAGATAGATTTTTCAGAAGGCATCCGTGAAAAAAGGAATAATAAGAAAGGAAAAGCAAGAACTCGAAATCGAAATCGAATAACACACAACAAATTCCAGTGATTTCGTTGAATCGAAAATCGGCAACAGGGTTTGTGTTCAAGCTCCGAAATGGCCCAAATCAAAAGCGTTTATTAAATTCAATTCAATTTCCCATGTTCATCACCACAGATCATCGCCTAAATTTAACTTCCTAATTTAATCCTCACTCTCTTCGCTTTATTAACGATCTTAATCACCATGGGAAAGCGCAAGCGAGACTCTGATCAGACCCTCCCCGATCGTCCTTTTCATTTTTCTGGTATGCCCTTCTTTTCCTTTGTAACCCATCATGCTCTGTTTCTGTTTGTTGAAATGTCTGTAAGAGATTATTCCTTTGCGTCGATACAGAGTTTTGGTTAAATCACCTTTGTTTGAGCTTTGAAATTGATGGGGTGCTTGGGGCGGGGGCGGCATGGGTTTTGTAAGTAATTGGCATTTTTAGAATTTCAATCGGATCCATGAGAGTTTTCCACAAGAATATATTGGGGATTGTTTTGGCCTTTAAGGATGTAGTTTGTTGACCAATCTCAGTCAATTGGCTACTTCAATACCTTTTAGAATTAGTTTTGGTTGAACGCTTTGGAAGAACTGATGTATTCTTCTGATTTTCCTATGTTTTGAATGATAAAATGGAACATGATCATACGTATGTTGCAGGGGCAGTGACTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGTTTGTACTCTTTTGTTTGCTTCAGACATTCCATTTTAAAAATGAGAAACTGTTCATACTTTGTTATTTAAACTTGCTTGCTTCCTTGACTTATCTAGTTCAAGTTTCAGTCAGTAGGCAAAATAGTAGTTCAAACCTTTCCCTTACTAGAGAAACATTTAGATCCCTCCTTTTAGTTGATGGCAATCTATTAAAGCTATGTTGCATTGAACAAGCAGGATCAGACTCTTGCCCGCCCGGTATTCATGAAACGTTTATGTCATCAGTATAGCCACCAATATTATCGGCGAGGTTCAACCAGTCAACCAAATGCATCCACCTCCCGTGAAAACCGAGTGAGAACCATCCTTGAAGAGCGACCCGCTTTTAAGTTTTTTGCTGCTCATCGAAACTCGGAGTTTCCAGACCATATAGGTATACTTTCTGAAGTTCCTAAACATGGTCATGCACATTTTTCAGTTGGGAATGAGAGGACGTTTTGCAATGACATGTTCACTTGTAATGTTATTAAATGTTATAAGATGTTTGAAAATTCTTTCCCTATATGTCATGTGGATACTTATAATCAAATGAAATGTAACAGCCCAAAGGGGTGGATTATGAGATCCCACCTCGGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTACCTAGTAAACGTGTTTTAAAACTGTGAGGCTGACTGCGATACGTAACGAGCCAAAATAGATAATATCTACTAGCGGTGGACCTTATAGAAAGGTGGTTTGTATGCCATATCTCAAATAAATTAAATTCCAATTGGTTTTTTTGCGTAGTAGTAGAGTGAATTTTTGTTAAGTAGCAGCAGAGGAATTTAGTTGGAGACATTTATGTACTTGTGTAGGGCAATGTCTAAAACAGTATATTTTAGAGAATAAAGATATCGTGACCATTGATTTCCCTTTTTCCTTTTAGAAGAGATGGGAATGAGTAATCCATGTCTTTAGTAGATCACTTGTTTATACACGAATCATTAAGTTCTTTTCTTCACAACAAAGAAAGGAAGAGTGAAAACAAGATGAGATGCACACAGAATCACCTTTTGAGGAATCATGAGTCAATTTTACTCCCTACATTGGCAGCAAAGGCAGCCATTGATACCTAAAATACCAACCATGTCAATGCGCGTGGGAGTTGGAGAGGGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTATGACTGTGAGGTTGACGACAATACGTAATGGACAAAAGCAAACAATATCTGTTAGCGGTGGGCTTGAGCTGTTACAAATGGTATTAGAGTTAGACATTGGGCCGTCTGCTAACAAGGACGCTGGGTCCCCAAGGAAGTGGATTGTGAGATCCCACATTGGTTAGAGAGGGGAATGAAGTATTCCTAGGGTGACGCTGGGTCTTCAAGGGGGTGGATTGTGAGATCGCACATTGGTTAGAGAGGGGAATGAAGTGACGCTGGGTCTCCAAAGGGGTGGATTGTGAGATCCCACATAAGTTGGAGAGAGGAATGAAGCGCCGCTGGGTCTCCAAAGGGGTGGATTGTGAGATCCCACATAAGTTGGAGAGAGGAATGAAGCGCCGCTGGGTCTCCAAGGGGGTGGATTGTGAGATCCCACATAAGTTGGAGAGAGGAATGAAGCGCCGCTGGGTCTCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGTTGGAGAGGGGAATGAAGTATTCCTTATAACGATGTGGAAAACTTTCCTTAGTAGACTCGTTTTAAAATTGTGAGGCTGACAACTATATGTAACGGATCGAAGCTGACAATATCTGCTAGCGGTGGACTTGGGCTATTACATTGTCATAGGTCGAGTTTGCTTGAATTGACATGGCATATGAGGGAGCTTCACAAAATGTATGGTTAACGTGAACTTATTTCTACATCGTTCGAGTTAATTTTTATCTTAATCTCGTTAACAAATTCTAATACTAAAAGTATAACAATATATGTGATAGTAATTCTTTCACATTCATTTTAGTTTCGTGTAATACTAAAAGAGCAATGAACCCTTGATAAATTTTAGAAGTGAAGTGATTTAGTTTTACTCAGAATTGGAATTTGTTGACTATGGGTGTAATTATTTATTATTTAGGAAATAAAATTAATAATGAATTAGTATTTATAAAATAAAAGAGTTATCAGTCATCAATTGACCGCATAGCGCAGTGGATTAGCGCGTTTGACTTCGGATCAAAAGGTCGTGGGTTCGACTCCCACTGTGGTCGCTTTTTTCTTTTTCCGGATTTTTACAAATTGTCCAATTTTAATATTAAAACAGACTTTTCTTTTTTCATTATTTTTATTGAAAGAAACAATAATATAAAATTTTCTATTTTTTAAGACATAAATTGAACATTTATATTTTTTATCCTTATGATAAGTTTCAATTTTGTTCTTAGTTTATATTTATAGAAATTTGATTCTCATAAATTTAGTCCCAATTAATTTGATATTCTTCAAATTTTAATTAAATCATATGATTAGGACATTTTTTATTGCTTACTTGAAGGGATCCAAAAATATAAACCAAAGAATAGTGGCGGCCATGGAGTAGCATGTCTCCCACCATGGCTAGCGGTATGGTTAGCGAGGCACCTAAAGCAGCTACAAGTGGGCTCGTCCAAACAACACCCATTGCCCTGA

mRNA sequence

ATGGGGCCCGTGGTTAATGTCGGTGGCACAGCACGGAGGCCTACGGTGGCTCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCTCCTCCCAGATCTCACCCACCGAACTTCAGTTTTAGCTACTTCCCCAATTCCCTCGATCTACAGCTGGCACTGTGGCGCAAGCGAGACTCTGATCAGACCCTCCCCGATCGTCCTTTTCATTTTTCTGGGGCAGTGACTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGATCAGACTCTTGCCCGCCCGGTATTCATGAAACGTTTATGTCATCAGTATAGCCACCAATATTATCGGCGAGGTTCAACCAGTCAACCAAATGCATCCACCTCCCGTGAAAACCGAGTGAGAACCATCCTTGAAGAGCGACCCGCTTTTAAGTTTTTTGCTGCTCATCGAAACTCGGAGTTTCCAGACCATATAGGGATCCAAAAATATAAACCAAAGAATAGTGGCGGCCATGGAGTAGCATGTCTCCCACCATGGCTAGCGGTATGGTTAGCGAGGCACCTAAAGCAGCTACAAGTGGGCTCGTCCAAACAACACCCATTGCCCTGA

Coding sequence (CDS)

ATGGGGCCCGTGGTTAATGTCGGTGGCACAGCACGGAGGCCTACGGTGGCTCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCCTCCTCCCAGATCTCACCCACCGAACTTCAGTTTTAGCTACTTCCCCAATTCCCTCGATCTACAGCTGGCACTGTGGCGCAAGCGAGACTCTGATCAGACCCTCCCCGATCGTCCTTTTCATTTTTCTGGGGCAGTGACTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGATCAGACTCTTGCCCGCCCGGTATTCATGAAACGTTTATGTCATCAGTATAGCCACCAATATTATCGGCGAGGTTCAACCAGTCAACCAAATGCATCCACCTCCCGTGAAAACCGAGTGAGAACCATCCTTGAAGAGCGACCCGCTTTTAAGTTTTTTGCTGCTCATCGAAACTCGGAGTTTCCAGACCATATAGGGATCCAAAAATATAAACCAAAGAATAGTGGCGGCCATGGAGTAGCATGTCTCCCACCATGGCTAGCGGTATGGTTAGCGAGGCACCTAAAGCAGCTACAAGTGGGCTCGTCCAAACAACACCCATTGCCCTGA

Protein sequence

MGPVVNVGGTARRPTVAPPPPPPPPPPPPPPPPPPPTPPPRSHPPNFSFSYFPNSLDLQLALWRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIGIQKYKPKNSGGHGVACLPPWLAVWLARHLKQLQVGSSKQHPLP
Homology
[Close]
BLAST of Csor.00g090870 vs. NCBI nr
Match: KAG6587869.1 (hypothetical protein SDJN03_16434, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398 bits (1023), Expect = 1.02e-139
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGPVVNVGGTARRPTVAPPPPPPPPPPPPPPPPPPPTPPPRSHPPNFSFSYFPNSLDLQL 60
           MGPVVNVGGTARRPTVAPPPPPPPPPPPPPPPPPPPTPPPRSHPPNFSFSYFPNSLDLQL
Sbjct: 1   MGPVVNVGGTARRPTVAPPPPPPPPPPPPPPPPPPPTPPPRSHPPNFSFSYFPNSLDLQL 60

Query: 61  ALWRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRG 120
           ALWRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRG
Sbjct: 61  ALWRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRG 120

Query: 121 STSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIGIQKYKPKNSGGHGVACLPP 180
           STSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIGIQKYKPKNSGGHGVACLPP
Sbjct: 121 STSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIGIQKYKPKNSGGHGVACLPP 180

Query: 181 WLAVWLARHLKQLQVGSSKQHPLP 204
           WLAVWLARHLKQLQVGSSKQHPLP
Sbjct: 181 WLAVWLARHLKQLQVGSSKQHPLP 204

[Close]
BLAST of Csor.00g090870 vs. NCBI nr
Match: XP_023531302.1 (uncharacterized protein LOC111793584 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201 bits (510), Expect = 1.13e-61
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS
Sbjct: 4   RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 63

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI-GIQK 164
           QPNASTSR+NRVRTILEERPAFKFFAAHRNSEFPDHI GI++
Sbjct: 64  QPNASTSRDNRVRTILEERPAFKFFAAHRNSEFPDHIDGIER 105

[Close]
BLAST of Csor.00g090870 vs. NCBI nr
Match: XP_022925430.1 (uncharacterized protein LOC111432724 [Cucurbita moschata])

HSP 1 Score: 200 bits (509), Expect = 1.61e-61
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARP FMKRLCHQYSHQYYRRGSTS
Sbjct: 4   RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTS 63

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI-GIQK 164
           QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI GI++
Sbjct: 64  QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIDGIER 105

[Close]
BLAST of Csor.00g090870 vs. NCBI nr
Match: XP_023007443.1 (uncharacterized protein LOC111499940 [Cucurbita maxima])

HSP 1 Score: 183 bits (465), Expect = 7.23e-55
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RKRD+DQTLPDRPFHFSG VTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGS S
Sbjct: 4   RKRDTDQTLPDRPFHFSGPVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSIS 63

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI-GIQK 164
           Q NASTS ENRVRTILEERPAFKF AAHRNSEFPDHI GI++
Sbjct: 64  QANASTSCENRVRTILEERPAFKF-AAHRNSEFPDHIDGIER 104

[Close]
BLAST of Csor.00g090870 vs. NCBI nr
Match: XP_022961020.1 (uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata])

HSP 1 Score: 150 bits (379), Expect = 8.76e-42
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RK  SDQT  DRP H SG V FSNQMDVRSEED++LARP+FMKR  HQYSHQY RRGSTS
Sbjct: 10  RKPGSDQTHHDRPHHLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS 69

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI 160
           + NASTSRENRVRTILE+RPAFKF AAH NSEFPDHI
Sbjct: 70  EANASTSRENRVRTILEKRPAFKF-AAHCNSEFPDHI 105

[Close]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match: A0A6J1EHY3 (uncharacterized protein LOC111432724 OS=Cucurbita moschata OX=3662 GN=LOC111432724 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 7.78e-62
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARP FMKRLCHQYSHQYYRRGSTS
Sbjct: 4   RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTS 63

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI-GIQK 164
           QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI GI++
Sbjct: 64  QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIDGIER 105

[Close]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match: A0A6J1L7P0 (uncharacterized protein LOC111499940 OS=Cucurbita maxima OX=3661 GN=LOC111499940 PE=4 SV=1)

HSP 1 Score: 183 bits (465), Expect = 3.50e-55
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RKRD+DQTLPDRPFHFSG VTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGS S
Sbjct: 4   RKRDTDQTLPDRPFHFSGPVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSIS 63

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI-GIQK 164
           Q NASTS ENRVRTILEERPAFKF AAHRNSEFPDHI GI++
Sbjct: 64  QANASTSCENRVRTILEERPAFKF-AAHRNSEFPDHIDGIER 104

[Close]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match: A0A6J1HAS2 (uncharacterized protein LOC111461650 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461650 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 4.24e-42
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RK  SDQT  DRP H SG V FSNQMDVRSEED++LARP+FMKR  HQYSHQY RRGSTS
Sbjct: 10  RKPGSDQTHHDRPHHLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS 69

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI 160
           + NASTSRENRVRTILE+RPAFKF AAH NSEFPDHI
Sbjct: 70  EANASTSRENRVRTILEKRPAFKF-AAHCNSEFPDHI 105

[Close]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match: A0A6J1JKN5 (uncharacterized protein LOC111485281 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485281 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 6.00e-42
Identity = 78/97 (80.41%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 64  RKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGSTS 123
           RK  SDQT  DRP H SG V FSNQMDVRSEED++LARP+FMKR  HQYSHQY RRGSTS
Sbjct: 10  RKPGSDQTHHDRPHHLSGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS 69

Query: 124 QPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI 160
           Q NASTSRENRVRTILE+RP FKF AAH NSEFPDHI
Sbjct: 70  QENASTSRENRVRTILEKRPTFKF-AAHCNSEFPDHI 105

[Close]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match: A0A6J1BZ68 (uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006826 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 3.03e-41
Identity = 79/98 (80.61%), Postives = 82/98 (83.67%), Query Frame = 0 

Query: 64  RKR-DSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPVFMKRLCHQYSHQYYRRGST 123
           RKR  SD T PD P H SG V FSNQMDV SEEDQ+LARPVFMKR  HQYSHQY RRGST
Sbjct: 4   RKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRRGST 63

Query: 124 SQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI 160
           SQ NASTSRENRVRT+LEERPAFKF AAH NSEFP+HI
Sbjct: 64  SQANASTSRENRVRTVLEERPAFKF-AAHCNSEFPNHI 100

The following BLAST results are available for this feature:
BLAST of Csor.00g090870 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g090870 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587869.11.02e-139100.00hypothetical protein SDJN03_16434, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023531302.11.13e-6196.08uncharacterized protein LOC111793584 [Cucurbita pepo subsp. pepo][more]
XP_022925430.11.61e-6196.08uncharacterized protein LOC111432724 [Cucurbita moschata][more]
XP_023007443.17.23e-5591.18uncharacterized protein LOC111499940 [Cucurbita maxima][more]
XP_022961020.18.76e-4280.41uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata][more]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EHY37.78e-6296.08uncharacterized protein LOC111432724 OS=Cucurbita moschata OX=3662 GN=LOC1114327... [more]
A0A6J1L7P03.50e-5591.18uncharacterized protein LOC111499940 OS=Cucurbita maxima OX=3661 GN=LOC111499940... [more]
A0A6J1HAS24.24e-4280.41uncharacterized protein LOC111461650 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JKN56.00e-4280.41uncharacterized protein LOC111485281 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1BZ683.03e-4180.61uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
BLAST of Csor.00g090870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g090870.m01Csor.00g090870.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding