Csor.00g089580 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g089580
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM17-2-like
LocationCsor_Chr11: 3172926 .. 3173600 (+)
RNA-Seq ExpressionCsor.00g089580
SyntenyCsor.00g089580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGTGGCGCCTTTGGTATGGGCGCCGTTGGTGGCTCGGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCTCCTAAAGGATCTCGCCTCCTCGGCGGTTCTCAAGCCGTCCAAATGAACGCGCCTCGTATTGGCGGTAGCTTTGCTGTATGGGGCGGCTTGTTCTCCACATTTGATTGCTCCATGGTTTACCTCCGGCAGAAGGAAGATCCGTGGAACTCGATCATAGCCGGTGCCGCTACTGGCGGTTTCCTCCAGATGCGTCAGGGTGTCGGCGCCTCCGCTCGATCGGCTGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTTCTTAGTCAACCGCAGAACGCTCCTATTATGATCGACGATGCCGGTGCTATGGGCGGCGTTCCTGGTTATCCTATGGAACAGATTCCGGGCCTAACGCCGCCGCAGACTCTTCCTCAGGAGGCTGCGGGTGCGGGCTCGGGATCGTGGTTCGGAGGATGGTTCAATGGCGGACAGAAAAAGGATTCAGAAGCAACTCGTGGAGAGAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAATACAAGTAA

mRNA sequence

ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGTGGCGCCTTTGGTATGGGCGCCGTTGGTGGCTCGGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCTCCTAAAGGATCTCGCCTCCTCGGCGGTTCTCAAGCCGTCCAAATGAACGCGCCTCGTATTGGCGGTAGCTTTGCTGTATGGGGCGGCTTGTTCTCCACATTTGATTGCTCCATGGTTTACCTCCGGCAGAAGGAAGATCCGTGGAACTCGATCATAGCCGGTGCCGCTACTGGCGGTTTCCTCCAGATGCGTCAGGGTGTCGGCGCCTCCGCTCGATCGGCTGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTTCTTAGTCAACCGCAGAACGCTCCTATTATGATCGACGATGCCGGTGCTATGGGCGGCGTTCCTGGTTATCCTATGGAACAGATTCCGGGCCTAACGCCGCCGCAGACTCTTCCTCAGGAGGCTGCGGGTGCGGGCTCGGGATCGTGGTTCGGAGGATGGTTCAATGGCGGACAGAAAAAGGATTCAGAAGCAACTCGTGGAGAGAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAATACAAGTAA

Coding sequence (CDS)

ATGGGAACGCCGGAGACTTCTCGGGAGCCTTGTCCAGATCGGATCCTCGATGACATCGGTGGCGCCTTTGGTATGGGCGCCGTTGGTGGCTCGGCCTTCCACTTTCTCAAAGGCGTCTACAGTTCTCCTAAAGGATCTCGCCTCCTCGGCGGTTCTCAAGCCGTCCAAATGAACGCGCCTCGTATTGGCGGTAGCTTTGCTGTATGGGGCGGCTTGTTCTCCACATTTGATTGCTCCATGGTTTACCTCCGGCAGAAGGAAGATCCGTGGAACTCGATCATAGCCGGTGCCGCTACTGGCGGTTTCCTCCAGATGCGTCAGGGTGTCGGCGCCTCCGCTCGATCGGCTGTGTTCGGCGGTGTTCTGTTGGCTCTGATCGAGGGGGCCGGGATCATGCTGAATAAGGTTCTTAGTCAACCGCAGAACGCTCCTATTATGATCGACGATGCCGGTGCTATGGGCGGCGTTCCTGGTTATCCTATGGAACAGATTCCGGGCCTAACGCCGCCGCAGACTCTTCCTCAGGAGGCTGCGGGTGCGGGCTCGGGATCGTGGTTCGGAGGATGGTTCAATGGCGGACAGAAAAAGGATTCAGAAGCAACTCGTGGAGAGAGCGAAACGAAGATTTTGGAGAGCTTTGATTCGCCGCCGGTGCCGAATTTCGAATACAAGTAA

Protein sequence

MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAPRIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGGVLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK
Homology
BLAST of Csor.00g089580 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 5.0e-85
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GVPGYP-MEQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M+ +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TLPQE--------------AAGAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPP 225
               +              A+ + S SWFGG F+  +KK+      ES+T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFD--KKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Csor.00g089580 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.1e-74
Identity = 142/225 (63.11%), Postives = 176/225 (78.22%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP G+RL GG QA++M+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R GGSF+VWGGL+STFDC++VY RQKEDPWNSI++GAATGGFL +RQG+GASARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQ-EAAG 180
           VLLA+IEG GIMLNKV S   N   M D A     +P Y M QI G + P  +P+  ++ 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISGQSVP--VPETSSSS 180

Query: 181 AGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 225
           +GS SWFG  F   +KK++E    ES T ILESFD+PPVP +E+K
Sbjct: 181 SGSVSWFGSLFK--KKKETEDHHSESRTHILESFDAPPVPTYEFK 218

BLAST of Csor.00g089580 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40
Identity = 89/167 (53.29%), Postives = 110/167 (65.87%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG--SRLLGGSQAVQMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G + AV++ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----GGVPGYPMEQ 164
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169

BLAST of Csor.00g089580 vs. ExPASy Swiss-Prot
Match: Q2HJE9 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX=9913 GN=TIMM17B PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 89/167 (53.29%), Postives = 109/167 (65.27%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG--SRLLGGSQAVQMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G   AV++ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG  L  R    A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAMGGV-----PGYPMEQ 164
           LALIEG GI+L +  +Q  +NAP  ++D G +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPGQLPSKEGTPGPGYPSYQ 169

BLAST of Csor.00g089580 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39
Identity = 88/167 (52.69%), Postives = 108/167 (64.67%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG--SRLLGGSQAVQMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   R  G   AV++ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGGVL 124
           GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG  L  R G  A   SA+ GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----GGVPGYPMEQ 164
           LALIEG GI+L +  +Q  +NAP  ++D   +        PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYPNYQ 169

BLAST of Csor.00g089580 vs. NCBI nr
Match: XP_022933996.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita moschata] >KAG6587998.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021892.1 Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455 bits (1170), Expect = 1.82e-161
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180

Query: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK
Sbjct: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

BLAST of Csor.00g089580 vs. NCBI nr
Match: XP_023529338.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453 bits (1166), Expect = 7.40e-161
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAG 
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGG 180

Query: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK
Sbjct: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

BLAST of Csor.00g089580 vs. NCBI nr
Match: XP_023006791.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita maxima])

HSP 1 Score: 452 bits (1163), Expect = 2.12e-160
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQAVQMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180

Query: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GSGSWFGGWFNGGQKKD EATRGESETKILESFDSPPVPNFEYK
Sbjct: 181 GSGSWFGGWFNGGQKKDKEATRGESETKILESFDSPPVPNFEYK 224

BLAST of Csor.00g089580 vs. NCBI nr
Match: XP_022144978.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica charantia])

HSP 1 Score: 422 bits (1085), Expect = 1.85e-148
Identity = 207/227 (91.19%), Postives = 216/227 (95.15%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAG- 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLP  A+  
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 --AGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
             +GSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

BLAST of Csor.00g089580 vs. NCBI nr
Match: XP_038878607.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa hispida])

HSP 1 Score: 417 bits (1072), Expect = 1.71e-146
Identity = 204/226 (90.27%), Postives = 215/226 (95.13%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKG+YSSPKG+RLLGGSQAV+MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQG GASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQE--AA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM GVPGYP++QIPGLTPP+T      ++
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPVDQIPGLTPPETSSASPGSS 180

Query: 181 GAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GAGSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFE+K
Sbjct: 181 GAGSGSWFGGWFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

BLAST of Csor.00g089580 vs. ExPASy TrEMBL
Match: A0A6J1F0K8 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111441235 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 8.80e-162
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180

Query: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK
Sbjct: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224

BLAST of Csor.00g089580 vs. ExPASy TrEMBL
Match: A0A6J1KYR6 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499445 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 1.03e-160
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQAVQMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVQMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAGA 180

Query: 181 GSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
           GSGSWFGGWFNGGQKKD EATRGESETKILESFDSPPVPNFEYK
Sbjct: 181 GSGSWFGGWFNGGQKKDKEATRGESETKILESFDSPPVPNFEYK 224

BLAST of Csor.00g089580 vs. ExPASy TrEMBL
Match: A0A6J1CUQ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordica charantia OX=3673 GN=LOC111014515 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 8.93e-149
Identity = 207/227 (91.19%), Postives = 216/227 (95.15%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQA++MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVY+RQKEDPWNSIIAGAATGGFLQMRQG  ASARSAVFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQEAAG- 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLTPPQTLP  A+  
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 --AGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
             +GSGSWFGGWF GGQKKDSEA RG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

BLAST of Csor.00g089580 vs. ExPASy TrEMBL
Match: A0A6J1JFI2 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485270 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 8.26e-147
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPK +RLLGGSQAV+MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKSARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQG GASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQ--EAA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPM+QIPGLT PQT  +  E++
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTTPQTSGESLESS 180

Query: 181 GAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
            AGS SWFGGWF GGQKKDSEATRG+ ETKILESFDSPPVPNFEYK
Sbjct: 181 HAGSESWFGGWFGGGQKKDSEATRGDGETKILESFDSPPVPNFEYK 226

BLAST of Csor.00g089580 vs. ExPASy TrEMBL
Match: A0A6J1HAR7 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111461647 PE=4 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 4.78e-146
Identity = 206/226 (91.15%), Postives = 214/226 (94.69%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKG+RLLGGSQAV+MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQG GASARSA+FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQE--AA 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPM+QIPGL  PQT      ++
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 224
            AGS SWFGGWF GGQKKDSEA+RGES+TKILESFDSPPVPNFEYK
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

BLAST of Csor.00g089580 vs. TAIR 10
Match: AT2G37410.1 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-86
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GVPGYP-MEQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M+ +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TLPQE--------------AAGAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPP 225
               +              A+ + S SWFGG F+  +KK+      ES+T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFD--KKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Csor.00g089580 vs. TAIR 10
Match: AT2G37410.2 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-86
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHF+KG Y+SPKGSR +GG+Q+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R GGSFAVWGGLFSTFDC+MVYLRQKEDPWNSIIAGAATGGFL MRQG GA++RSA+FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMG--------GVPGYP-MEQIPGLTPPQ 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G  G        G+PG P M+ +PG+   Q
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 TLPQE--------------AAGAGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPP 225
               +              A+ + S SWFGG F+  +KK+      ES+T++LESFD+PP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLFD--KKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Csor.00g089580 vs. TAIR 10
Match: AT1G20350.1 (translocase inner membrane subunit 17-1 )

HSP 1 Score: 278.9 bits (712), Expect = 3.7e-75
Identity = 142/225 (63.11%), Postives = 176/225 (78.22%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGSA+H ++G+Y+SP G+RL GG QA++M+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R GGSF+VWGGL+STFDC++VY RQKEDPWNSI++GAATGGFL +RQG+GASARSA+ GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMEQIPGLTPPQTLPQ-EAAG 180
           VLLA+IEG GIMLNKV S   N   M D A     +P Y M QI G + P  +P+  ++ 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAAT--SLP-YGMGQISGQSVP--VPETSSSS 180

Query: 181 AGSGSWFGGWFNGGQKKDSEATRGESETKILESFDSPPVPNFEYK 225
           +GS SWFG  F   +KK++E    ES T ILESFD+PPVP +E+K
Sbjct: 181 SGSVSWFGSLFK--KKKETEDHHSESRTHILESFDAPPVPTYEFK 218

BLAST of Csor.00g089580 vs. TAIR 10
Match: AT5G11690.1 (translocase inner membrane subunit 17-3 )

HSP 1 Score: 151.8 bits (382), Expect = 6.7e-37
Identity = 74/126 (58.73%), Postives = 99/126 (78.57%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGSRLLGGSQAVQMNAP 60
           M T + S+E    RI++ IG AFG GAVGGS +HF++G Y+SP G+R +GG+QA  MNAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGG 120
           R+GG+FAV+GGL STFD ++V +R+KEDPWNSI+AGAATGG L +R+GV A++ SAV  G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALI 127
             LA++
Sbjct: 121 FFLAVL 126

BLAST of Csor.00g089580 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 45.4 bits (106), Expect = 6.8e-05
Identity = 30/110 (27.27%), Postives = 55/110 (50.00%), Query Frame = 0

Query: 20  GGAFGMGAVGGSAFHFLKGVYSSPKG-------SRLLGGS-QAVQMNAPRIGGSFAVWGG 79
           G  +  G+V G++     G+ S   G       +R+L  S QA +    R+G    + G 
Sbjct: 64  GTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVG----IVGL 123

Query: 80  LFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSAVFGGV 122
           +++  +  +V +  K+D W S++AG  TG   +  +GV ++A +  FGG+
Sbjct: 124 IYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGI 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SP355.0e-8565.99Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis t... [more]
Q9LN275.1e-7463.11Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis t... [more]
O608302.2e-4053.29Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ... [more]
Q2HJE91.1e-3953.29Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus OX... [more]
Q9Z0V71.4e-3952.69Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus ... [more]
Match NameE-valueIdentityDescription
XP_022933996.11.82e-161100.00mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ... [more]
XP_023529338.17.40e-16199.55mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ... [more]
XP_023006791.12.12e-16099.11mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ... [more]
XP_022144978.11.85e-14891.19mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica ... [more]
XP_038878607.11.71e-14690.27mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa ... [more]
Match NameE-valueIdentityDescription
A0A6J1F0K88.80e-162100.00mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit... [more]
A0A6J1KYR61.03e-16099.11mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit... [more]
A0A6J1CUQ08.93e-14991.19mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordic... [more]
A0A6J1JFI28.26e-14791.59mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit... [more]
A0A6J1HAR74.78e-14691.15mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT2G37410.13.5e-8665.99translocase inner membrane subunit 17-2 [more]
AT2G37410.23.5e-8665.99translocase inner membrane subunit 17-2 [more]
AT1G20350.13.7e-7563.11translocase inner membrane subunit 17-1 [more]
AT5G11690.16.7e-3758.73translocase inner membrane subunit 17-3 [more]
AT1G17530.16.8e-0527.27translocase of inner mitochondrial membrane 23 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 16..122
e-value: 8.4E-27
score: 93.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..224
NoneNo IPR availablePANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 1..224
NoneNo IPR availablePANTHERPTHR10485:SF14MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17-2coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g089580.m01Csor.00g089580.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex
molecular_function GO:0008320 protein transmembrane transporter activity