Csor.00g087520 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAATGTCCCTCAATGCTTCCACAATGAAGTTAGCAGTTGTGTTCCTTGTCTGCTTAGCCATTTTTTCACCATCGACCAAGACCCTCGTGACAGCAAACTTTGATGCTGATTTCAATATCATTGGTTGCATTCCCTTTGTTGCAGAAGGGGCAATGTGTGCGGTAGAAGCTCTCAAGTCTCCAACTAGTGCTATTAAGACTTGCTGTGAAGCCGTTTTGAAGCTTAATGATTGTGACTCTAATATTTTCAAAAGTATTCCCCAATCCGACATGGATATAGTTAAGCAAGTTTGTGATGCGTTATAG ATGGCAGCAATGTCCCTCAATGCTTCCACAATGAAGTTAGCAGTTGTGTTCCTTGTCTGCTTAGCCATTTTTTCACCATCGACCAAGACCCTCGTGACAGCAAACTTTGATGCTGATTTCAATATCATTGGTTGCATTCCCTTTGTTGCAGAAGGGGCAATGTGTGCGGTAGAAGCTCTCAAGTCTCCAACTAGTGCTATTAAGACTTGCTGTGAAGCCGTTTTGAAGCTTAATGATTGTGACTCTAATATTTTCAAAAGTATTCCCCAATCCGACATGGATATAGTTAAGCAAGTTTGTGATGCGTTATAG ATGGCAGCAATGTCCCTCAATGCTTCCACAATGAAGTTAGCAGTTGTGTTCCTTGTCTGCTTAGCCATTTTTTCACCATCGACCAAGACCCTCGTGACAGCAAACTTTGATGCTGATTTCAATATCATTGGTTGCATTCCCTTTGTTGCAGAAGGGGCAATGTGTGCGGTAGAAGCTCTCAAGTCTCCAACTAGTGCTATTAAGACTTGCTGTGAAGCCGTTTTGAAGCTTAATGATTGTGACTCTAATATTTTCAAAAGTATTCCCCAATCCGACATGGATATAGTTAAGCAAGTTTGTGATGCGTTATAG MAAMSLNASTMKLAVVFLVCLAIFSPSTKTLVTANFDADFNIIGCIPFVAEGAMCAVEALKSPTSAIKTCCEAVLKLNDCDSNIFKSIPQSDMDIVKQVCDAL Homology
BLAST of Csor.00g087520 vs. NCBI nr
Match: KAG6590465.1 (hypothetical protein SDJN03_15888, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199 bits (507), Expect = 2.54e-64 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Csor.00g087520 vs. NCBI nr
Match: KAG6590467.1 (hypothetical protein SDJN03_15890, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (499), Expect = 4.23e-63 Identity = 100/103 (97.09%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Csor.00g087520 vs. NCBI nr
Match: KAG6590464.1 (hypothetical protein SDJN03_15887, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160 bits (406), Expect = 6.27e-49 Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Csor.00g087520 vs. NCBI nr
Match: KAG6590468.1 (hypothetical protein SDJN03_15891, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139 bits (349), Expect = 2.96e-40 Identity = 68/97 (70.10%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of Csor.00g087520 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 4.62e-22 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Csor.00g087520 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.24e-22 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Csor.00g087520 vs. ExPASy TrEMBL
Match: A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.18e-17 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Csor.00g087520 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.27e-17 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of Csor.00g087520 vs. ExPASy TrEMBL
Match: A0A0A0LYQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G212820 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.56e-17 Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Csor.00g087520 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.56e-17 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|