Csor.00g086490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g086490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Prefoldin subunit 4
Location	Csor_Chr05: 9826635 .. 9829418 (+)
RNA-Seq Expression	Csor.00g086490
Synteny	Csor.00g086490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGAGAAAAGGGATTTTTGGGGAAATTCAGAGATGGGTTATGGTCCGAATGGGAAAAAATTACGTGGGGTTCGATTCTTGGTGTGATTTTGGACAAGAAAGGTACAGGGGAAGAGGAAGGTTTGAGGTTTGGATGAAATAGCATGGTCTTAAGGGAAATTATAGATGTGTATACATATATAGCGAGATATAGATATAGATATACGCAGAAAAGGGGAGGGGGGGCGGGCAGTATCTGGCAGATTTGTGCATTGTTTTGAGGAAAAACGTGAGTTGGTGATCGAGTTAGAGAGTGAGTTGGGGTTCGAGTTTGGTAATTTGGTAGAGAAAATGAATAAATTGCTCTGCCCACGTTATCCAACCAACCCTATTCATAAATTTCATAATTGTATTCATTATGCTTCTTATCTTCTTCAAAAAAAAACATCTACTTAATTTAAATTTTTGTATTCTCGATCGATCGATTGCACGTGTACTTTCAAAACATCTACTTTATATTTAAAAATAGTTTCCTTTTTTGTGACTACGAGCAAAATTTTATTTTACTATACATATCGAAAAAAATTATGTTGAAAATGTAACTGAATATTACGGACACCAATATCGTAAAAGTAAATGGAAAATATTTAACTTTGGTTGCATTTTTGGTATTTCTGAGAGTGGGATTTATTTATCGACATTTTTAGGTATTAATTAGTATTTCGTGCACTGAGCTATACTTGAATTGGTCTTTTTAAGTGAATGAGAACGTCCCATCCAGAGGATGAAAACTCTCTCACACTCACACGTTATGTTAAAACTTGACTCGTGCGTATAATAAATGTGGGATATAGAGATTTGAACTTTTGGTTTCGATGAAAAAATGTGTCCATTATTGTTGAGCTAAGCTCGTGTTGACATTTGACTCGTACACTTACTGTAAGTGCTTTTACGCACGTCTCAAGCTAGATTGTTAGGTCAAAATCCACGAGCATAATTAAACTTTTCAAATTTATTGAAAAATACCCTTAAACTTCTTTAGACAATGACACGTGTCTATTTAACCGGTCCATAAACTTTGTAATTAAATATAGAGTTAAGTGATAAATTGAATCCGTAAACTTTCAGCCACGTGTCTATTTAACCAGTAAGTTGTAAAATGTGTCTGTATAATAGATTTTTTTAACTTTAAAAGAGCGTTTTTGGACAAACGGTGGAACCTACCAAGCTGGAGTATGATAGGGTCAGAGGGAATTTCTGGCGGAGCTGTAAAGTTCTTAACTTTTAATTGTATTTATTGTGTTGAAATTTTTTTAATTTTATATTTAATATTTCCTTAAACTATTTAATAATTTTTAATATTTTATAAATATTAAAAATGGAAAGGATGGATAAATATTTTATAGTTTTAAGGATTATTTGAGACAATGTAAAATTGAGGGTAAAGGGGTAATTTAACCTAAATATAAATATAATGGTACCCTAAAATGATAAGGGCAATTTCGTCATTTCGCTCAGGACTCCAATTGGCTCGTTCCATTTCCGTCTAACCGGAGCTTTCTTCCTCATTTTCACTACGAGCGATTGACTGACTGTTCGAACATGCAGCAGGTAAACGAAACCCTAATCGAACTCGTATTGAACCACTAATTTTCCTTGTATCATACAAATTTCCTTTCTTTTTCCGTCTTCTGACAATGGCGTTTTTGATGCCTAATGTGCACAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGTATTGATTTCATACGAGGAATCGGGTATTTAATGGTTTATTTTGCTATTTACTTTAAATATCTGATGTCCTTGCTGACTGATGGATTTTGAGTATCGATGTGATATGAACTTCGAAGTTTCTCCTCTTGAATTTTGTGAGTGCTTGAAATGTTGCTAAAAATTTCAATTGAGTAGTTGCTTGTTATCCCATTTTCTTCTCAGATTCAATTTGTGTAACCACGGAGGAGGAAATTCGACTTTCTTTTTTATTAAACAAATGCCCGATAGAAGGGGTTAGATGAATCAAGTGATATATTCCCTAAAAGATTGATTATCTTGGTTTTAATTTGTACTGTGTCAATACACACCGGATGTTTTTTTTGCTCTGTTCTACAGCATAGTATGTTGTTTTCTTTCCCATCTTTACTTTTTGGTGGTATTTGGGAGACTCTAGTTAGTGAAGCGATTCATCAATACTTGAACCTTGTGTCTCCTAAAGTTTGCCCTGCAACCAAATGTTTATTAGAGTGAGTGAGTGAGTTTGTGATGACTTTTGAGGGATTTTTTTTTTTTTTTTTTTTTTCAATAAGAAATTTGGAAAAAAGCACTGGTTTGTTACTTCCTCGATGAGCATTCTAAAGTGCCTTCAAGGGAATTTTCAAAATCACTTTTGGTTACTGTAAAAGTCACGTTGAATTCACCTCTGACAGTCGCTTTTCGTAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACATGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

mRNA sequence

ATGCGAGAGAAAAGGGATTTTTGGGGAAATTCAGAGATGGGTTATGGTCCGAATGGGAAAAAATTACGTGGGGACTCCAATTGGCTCGTTCCATTTCCGTCTAACCGGAGCTTTCTTCCTCATTTTCACTACGAGCGATTGACTGACTGTTCGAACATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACATGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

Coding sequence (CDS)

ATGCGAGAGAAAAGGGATTTTTGGGGAAATTCAGAGATGGGTTATGGTCCGAATGGGAAAAAATTACGTGGGGACTCCAATTGGCTCGTTCCATTTCCGTCTAACCGGAGCTTTCTTCCTCATTTTCACTACGAGCGATTGACTGACTGTTCGAACATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACATGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

Protein sequence

MREKRDFWGNSEMGYGPNGKKLRGDSNWLVPFPSNRSFLPHFHYERLTDCSNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD

Homology

[Close]

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot
Match: Q9M4C4 (Probable prefoldin subunit 4 OS=Avena fatua OX=4499 GN=VIP3 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.0e-48
Identity = 96/126 (76.19%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQG G+E++VTWEDQQNIN+F RLNNRFHEL DEIR AKE N+NLEDA NELIL DED+
Sbjct: 1   MQQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           +RF IGEVFAH+P ++VE RLE+MKE+  K LE+LEEEK+SI+AQMAELKKILYGKFKD+
Sbjct: 61  VRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDA 120

Query: 173 INLEDD 179
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot
Match: Q9M4B5 (Probable prefoldin subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AIP3 PE=1 SV=3)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 93/129 (72.09%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 53  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD 112
           MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 113 EDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKF 172
           E+M+RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+EK+SIV QMA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 173 KDSINLEDD 179
           KDSINLE+D
Sbjct: 121 KDSINLEED 129

[Close]

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot
Match: Q9NQP4 (Prefoldin subunit 4 OS=Homo sapiens OX=9606 GN=PFDN4 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-17
Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 51  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDE 110
           + M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA ++++L+D+
Sbjct: 3   ATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADD 62

Query: 111 D--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGK 170
           D  MI + IG+VF    +EE +  LEE K+   + ++ LE   +SI   +A+LK  LY K
Sbjct: 63  DCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAK 122

Query: 171 FKDSINLEDD 179
           F  +INLE D
Sbjct: 123 FGSNINLEAD 132

[Close]

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot
Match: Q2TBR6 (Prefoldin subunit 4 OS=Bos taurus OX=9913 GN=PFDN4 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 51  SNMQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDE 110
           + M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA  +++L+D+
Sbjct: 3   ATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADD 62

Query: 111 D--MIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGK 170
           D  MI + IG+VF    +EE +  LEE K+   + ++ LE   +SI   +A+LK  LY K
Sbjct: 63  DCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAK 122

Query: 171 FKDSINLEDD 179
           F  +INLE D
Sbjct: 123 FGSNINLEAD 132

[Close]

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot
Match: Q54TB7 (Probable prefoldin subunit 4 OS=Dictyostelium discoideum OX=44689 GN=pfdn4 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 60  ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED-MIRFHIG 119
           E+EV   DQ+ IN F RLNNR HEL  E +  +E  +   D+ ++L ++D+D   ++ +G
Sbjct: 14  ETEVCAADQKMINLFGRLNNRKHELMREKKAKQEDLEKATDSQDDLFIADDDSKFKYSMG 73

Query: 120 EVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLED 178
           E F  V +E+ E  +E+   +  ++++K++ + + I  +  ELK ILY KFK+SINLE+
Sbjct: 74  EAFLEVNKEDAESLIEKYINKLEEDIKKIDSDINDINEKHKELKVILYAKFKNSINLEE 132

[Close]

BLAST of Csor.00g086490 vs. NCBI nr
Match: KAG6599316.1 (putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (918), Expect = 1.43e-124
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MREKRDFWGNSEMGYGPNGKKLRGDSNWLVPFPSNRSFLPHFHYERLTDCSNMQQGGGSE 60
           MREKRDFWGNSEMGYGPNGKKLRGDSNWLVPFPSNRSFLPHFHYERLTDCSNMQQGGGSE
Sbjct: 1   MREKRDFWGNSEMGYGPNGKKLRGDSNWLVPFPSNRSFLPHFHYERLTDCSNMQQGGGSE 60

Query: 61  SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV 120
           SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV
Sbjct: 61  SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV 120

Query: 121 FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD 178
           FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
Sbjct: 121 FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD 178

[Close]

BLAST of Csor.00g086490 vs. NCBI nr
Match: KAG7030312.1 (putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352 bits (902), Expect = 3.95e-122
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MREKRDFWGNSEMGYGPNGKKLRGDSNWLVPFPSNRSFLPHFHYERLTDCSNMQQGGGSE 60
           MREKRDFWGNSEMGYGPNGKKLRG SNWLVPFPSNRSFLPHFH ERLTDCSNMQQGGGSE
Sbjct: 1   MREKRDFWGNSEMGYGPNGKKLRGGSNWLVPFPSNRSFLPHFHCERLTDCSNMQQGGGSE 60

Query: 61  SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV 120
           SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV
Sbjct: 61  SEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDMIRFHIGEV 120

Query: 121 FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD 178
           FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD
Sbjct: 121 FAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD 178

[Close]

BLAST of Csor.00g086490 vs. NCBI nr
Match: XP_022946140.1 (probable prefoldin subunit 4 [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 1.07e-78
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. NCBI nr
Match: XP_023521156.1 (probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo] >XP_023545585.1 probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238 bits (608), Expect = 4.36e-78
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. NCBI nr
Match: XP_022999107.1 (probable prefoldin subunit 4 [Cucurbita maxima])

HSP 1 Score: 237 bits (605), Expect = 1.25e-77
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELK+ILYGKFKDS
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKRILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL
Match: A0A6J1G2Y9 (Prefoldin subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111450309 PE=3 SV=1)

HSP 1 Score: 240 bits (612), Expect = 5.19e-79
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL
Match: A0A6J1K9X7 (Prefoldin subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111493587 PE=3 SV=1)

HSP 1 Score: 237 bits (605), Expect = 6.04e-78
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELK+ILYGKFKDS
Sbjct: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKRILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL
Match: A0A0A0LFH2 (Prefoldin subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G010310 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 7.84e-74
Identity = 117/126 (92.86%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETN+NLEDASNELILSD+D+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNENLEDASNELILSDDDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRF IGEVFAH+P+EEVEGRLE+MKEENV+NLEKL+EEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVENLEKLKEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL
Match: A0A5D3D4H6 (Prefoldin subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001560 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 1.11e-73
Identity = 117/126 (92.86%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+D+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDDDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRF IGEVFAH+P+EEVEGRLE+MKEENV++L+KLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVEHLKKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL
Match: A0A1S3C216 (Prefoldin subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496138 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 1.11e-73
Identity = 117/126 (92.86%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 53  MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDM 112
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+D+
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDDDV 60

Query: 113 IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 172
           IRF IGEVFAH+P+EEVEGRLE+MKEENV++L+KLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVEHLKKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 173 INLEDD 178
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Csor.00g086490 vs. TAIR 10
Match: AT1G08780.1 (ABI3-interacting protein 3 )

HSP 1 Score: 177.6 bits (449), Expect = 9.1e-45
Identity = 93/129 (72.09%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 53  MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD 112
           MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 113 EDMIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKF 172
           E+M+RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+EK+SIV QMA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 173 KDSINLEDD 179
           KDSINLE+D
Sbjct: 121 KDSINLEED 129

The following BLAST results are available for this feature:

BLAST of Csor.00g086490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M4C4	5.0e-48	76.19	Probable prefoldin subunit 4 OS=Avena fatua OX=4499 GN=VIP3 PE=2 SV=1	[more]
Q9M4B5	1.3e-43	72.09	Probable prefoldin subunit 4 OS=Arabidopsis thaliana OX=3702 GN=AIP3 PE=1 SV=3	[more]
Q9NQP4	7.8e-17	41.54	Prefoldin subunit 4 OS=Homo sapiens OX=9606 GN=PFDN4 PE=1 SV=1	[more]
Q2TBR6	1.0e-16	41.54	Prefoldin subunit 4 OS=Bos taurus OX=9913 GN=PFDN4 PE=2 SV=1	[more]
Q54TB7	1.2e-12	37.82	Probable prefoldin subunit 4 OS=Dictyostelium discoideum OX=44689 GN=pfdn4 PE=3 ...	[more]

BLAST of Csor.00g086490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599316.1	1.43e-124	100.00	putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030312.1	3.95e-122	98.88	putative prefoldin subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022946140.1	1.07e-78	100.00	probable prefoldin subunit 4 [Cucurbita moschata]	[more]
XP_023521156.1	4.36e-78	99.21	probable prefoldin subunit 4 [Cucurbita pepo subsp. pepo] >XP_023545585.1 probab...	[more]
XP_022999107.1	1.25e-77	98.41	probable prefoldin subunit 4 [Cucurbita maxima]	[more]

BLAST of Csor.00g086490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2Y9	5.19e-79	100.00	Prefoldin subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111450309 PE=3 SV=1	[more]
A0A6J1K9X7	6.04e-78	98.41	Prefoldin subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111493587 PE=3 SV=1	[more]
A0A0A0LFH2	7.84e-74	92.86	Prefoldin subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G010310 PE=3 SV=1	[more]
A0A5D3D4H6	1.11e-73	92.86	Prefoldin subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A1S3C216	1.11e-73	92.86	Prefoldin subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496138 PE=3 SV=1	[more]

BLAST of Csor.00g086490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08780.1	9.1e-45	72.09	ABI3-interacting protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..164
None	No IPR available	COILS	Coil	Coil	coord: 74..104
None	No IPR available	PANTHER	PTHR21100:SF10	PREFOLDIN SUBUNIT 4	coord: 53..178
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 68..165
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 68..171 e-value: 5.1E-23 score: 81.1
IPR016661	Prefoldin, subunit 4	PANTHER	PTHR21100	PREFOLDIN SUBUNIT 4	coord: 53..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g086490.m01	Csor.00g086490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding