Csor.00g086320 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGTGTGGAGAGAATGAATGGAAGGACCAAAAGCAGAGTCAAAATCCCACAAAAGTGCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGCCCAATGATGATCAAAGCAAGCAATGCACATGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCACCTCCCATTCTCCCACTCGCCGGAGCAACCACAAACCACCGCCCCACGCCGCCCAAACTCCATCCACTTCAACGTTGCATGCAAATCCTCAAATGGAAGCCTTGAAGTTGTCGGACAACATGTCGTCTCTCCTCGAGTTTGATGATGAAGCTTGTTTTGTAACACTTGATAATGTTCTCACCAACAACTTCATGGGATTTCAAGCTTCTTGCTTGTTTCAATAG ATGGGGAAGTGTGGAGAGAATGAATGGAAGGACCAAAAGCAGAGTCAAAATCCCACAAAAGTGCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGCCCAATGATGATCAAAGCAAGCAATGCACATGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCACCTCCCATTCTCCCACTCGCCGGAGCAACCACAAACCACCGCCCCACGCCGCCCAAACTCCATCCACTTCAACGTTGCATGCAAATCCTCAAATGGAAGCCTTGAAGTTGTCGGACAACATGTCGTCTCTCCTCGAGTTTGATGATGAAGCTTGTTTTGTAACACTTGATAATGTTCTCACCAACAACTTCATGGGATTTCAAGCTTCTTGCTTGTTTCAATAG ATGGGGAAGTGTGGAGAGAATGAATGGAAGGACCAAAAGCAGAGTCAAAATCCCACAAAAGTGCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGCCCAATGATGATCAAAGCAAGCAATGCACATGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCACCTCCCATTCTCCCACTCGCCGGAGCAACCACAAACCACCGCCCCACGCCGCCCAAACTCCATCCACTTCAACGTTGCATGCAAATCCTCAAATGGAAGCCTTGAAGTTGTCGGACAACATGTCGTCTCTCCTCGAGTTTGATGATGAAGCTTGTTTTGTAACACTTGATAATGTTCTCACCAACAACTTCATGGGATTTCAAGCTTCTTGCTTGTTTCAATAG MGKCGENEWKDQKQSQNPTKVQRKPIKVKYISSPMMIKASNAHEFRAIVQQLTGFTSHSPTRRSNHKPPPHAAQTPSTSTLHANPQMEALKLSDNMSSLLEFDDEACFVTLDNVLTNNFMGFQASCLFQ Homology
BLAST of Csor.00g086320 vs. NCBI nr
Match: KAG6599333.1 (hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258 bits (660), Expect = 7.94e-87 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of Csor.00g086320 vs. NCBI nr
Match: KGN60779.1 (hypothetical protein Csa_019238 [Cucumis sativus]) HSP 1 Score: 145 bits (365), Expect = 9.65e-42 Identity = 85/139 (61.15%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of Csor.00g086320 vs. NCBI nr
Match: KAA0063578.1 (hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 2.07e-16 Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Csor.00g086320 vs. NCBI nr
Match: XP_021282108.1 (uncharacterized protein LOC110414990 [Herrania umbratica]) HSP 1 Score: 67.4 bits (163), Expect = 3.59e-11 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
BLAST of Csor.00g086320 vs. NCBI nr
Match: KAF3969568.1 (hypothetical protein CMV_006648 [Castanea mollissima]) HSP 1 Score: 66.2 bits (160), Expect = 5.45e-11 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Csor.00g086320 vs. ExPASy TrEMBL
Match: A0A0A0LIA7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010150 PE=4 SV=1) HSP 1 Score: 145 bits (365), Expect = 4.67e-42 Identity = 85/139 (61.15%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of Csor.00g086320 vs. ExPASy TrEMBL
Match: A0A5A7V7M1 (VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00880 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.00e-16 Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Csor.00g086320 vs. ExPASy TrEMBL
Match: A0A7N2L612 (VQ domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.82e-12 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Csor.00g086320 vs. ExPASy TrEMBL
Match: A0A7N2L6S4 (VQ domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.82e-12 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Csor.00g086320 vs. ExPASy TrEMBL
Match: A0A6J1A533 (uncharacterized protein LOC110414990 OS=Herrania umbratica OX=108875 GN=LOC110414990 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.74e-11 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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