Csor.00g084450 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g084450
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 6896868 .. 6897206 (+)
RNA-Seq ExpressionCsor.00g084450
SyntenyCsor.00g084450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGTCTTATGAATCACAGCTACAAGACGAGGCTCAACCCCTCCTCCTCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCGGAGGAAGAAGCTGTCGACGGCCCGCCTTGGCGGCAGAAGGCCGCCACGAGCGGCGGTGATTTGGAGGTCGATTAGGAAAGTTCGAATGAGAAAGTGGTTGATGAAGGTCCGATGCGATTGTAAAGTGAAAAAGATGAATGAATTGTTTGACAAAGACAATGGCGGTTTCAATGGCTTTCTTAAAAGGATTCTAATGGAGATTTCTTCCGCTGTTCCTGTTCTTGGCGCTTCTCGCTTTATATAA

mRNA sequence

ATGGCTCAGTCTTATGAATCACAGCTACAAGACGAGGCTCAACCCCTCCTCCTCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCGGAGGAAGAAGCTGTCGACGGCCCGCCTTGGCGGCAGAAGGCCGCCACGAGCGGCGGTGATTTGGAGGTCGATTAGGAAAGTTCGAATGAGAAAGTGGTTGATGAAGGTCCGATGCGATTGTAAAGTGAAAAAGATGAATGAATTGTTTGACAAAGACAATGGCGGTTTCAATGGCTTTCTTAAAAGGATTCTAATGGAGATTTCTTCCGCTGTTCCTGTTCTTGGCGCTTCTCGCTTTATATAA

Coding sequence (CDS)

ATGGCTCAGTCTTATGAATCACAGCTACAAGACGAGGCTCAACCCCTCCTCCTCTCCGGCCACCGTCGACCGTTGCGCCGGTGGATCCATCTGCGGAGGAAGAAGCTGTCGACGGCCCGCCTTGGCGGCAGAAGGCCGCCACGAGCGGCGGTGATTTGGAGGTCGATTAGGAAAGTTCGAATGAGAAAGTGGTTGATGAAGGTCCGATGCGATTGTAAAGTGAAAAAGATGAATGAATTGTTTGACAAAGACAATGGCGGTTTCAATGGCTTTCTTAAAAGGATTCTAATGGAGATTTCTTCCGCTGTTCCTGTTCTTGGCGCTTCTCGCTTTATATAA

Protein sequence

MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI
Homology
BLAST of Csor.00g084450 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (564), Expect = 9.92e-73
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
           MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  MRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112
           MRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI
Sbjct: 61  MRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112

BLAST of Csor.00g084450 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220 bits (560), Expect = 4.04e-72
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
           MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  MRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112
           MRKWLMKVRCDCKVKK+NELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI
Sbjct: 61  MRKWLMKVRCDCKVKKINELFDKDNGGFNGFLKRILMEISSAVPVLGASRFI 112

BLAST of Csor.00g084450 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145 bits (366), Expect = 1.73e-42
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
           MAQS+ESQ +DEAQ LL S HRRP RRWIHLRRK+L   RLGG RPPRAA  WRSIR   
Sbjct: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR--- 60

Query: 61  MRKWLMKVRCDCKVKKMNELFDKDNG-------GFNGFLKRILMEISSAVPVLGAS 109
            RKWLMK+RCDC VKK+ +LF K  G       GF+ FLKRILMEIS AVPVLGAS
Sbjct: 61  FRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113

BLAST of Csor.00g084450 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (307), Expect = 1.15e-33
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
           M +SY+ + QDEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR   IWRSI++++
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  MRKWL----MKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109
           MRKW     MKVRC            KD  GFN FLK+IL+EIS A+P+LG S
Sbjct: 61  MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 101

BLAST of Csor.00g084450 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 117 bits (294), Expect = 4.56e-31
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0

Query: 4   SYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRK 63
           SYE + +DEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR A IWRSI++++MRK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WLM----KVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLG 107
           W M    KVRC            KD   FN FL++IL+EIS A+P+LG
Sbjct: 65  WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLG 100

BLAST of Csor.00g084450 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 5.56e-34
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60
           M +SY+ + QDEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR   IWRSI++++
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  MRKWL----MKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109
           MRKW     MKVRC            KD  GFN FLK+IL+EIS A+P+LG S
Sbjct: 61  MRKWAAMMTMKVRC------------KDIAGFNAFLKKILLEISLAIPLLGVS 101

BLAST of Csor.00g084450 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 1.34e-32
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0

Query: 4   SYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRK 63
           SYE + +DEA+ LL SG+RRP RRWI LRRKKL TARLGGRRPPR A IWRSI++++MRK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WLM----KVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109
           W M    KVRC            KD   FN FL++IL+EIS A+P+LG S
Sbjct: 65  WAMTMTNKVRC------------KDIASFNAFLRKILLEISLAIPLLGVS 102

BLAST of Csor.00g084450 vs. ExPASy TrEMBL
Match: A0A067L0E6 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.36e-10
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPLLLSGHRRPL-RRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKV 60
           MA + E+Q Q+  Q  L +  R P+ RR I LRR+K+ T RLGG++P R   + R ++K+
Sbjct: 1   MALNDETQNQNTTQTHLTAASRWPIIRRRISLRRRKMHTVRLGGKKPRRGLFLLRMLKKM 60

Query: 61  RMRKWLMKVRCDCKVKKMNELFD---KD----NGGFNGFLKRILMEISSAVPVLGAS 109
           R+R WL K++  C ++K+ E +    KD          + +R++ME S AVPV+G S
Sbjct: 61  RLR-WL-KLQYSCMLRKLKEYYSNLIKDIVEAGATIESYQQRLVMEASLAVPVMGIS 115

BLAST of Csor.00g084450 vs. ExPASy TrEMBL
Match: A0A7J7DGQ9 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G01157 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.53e-10
Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 17  LLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVRMRKWLMKVRCDCKVKK 76
           L++  R+P  + +HLRR K+ T RLGG++  R  ++ R +R++R+R WL K+R +C +KK
Sbjct: 14  LITTFRQPTGKRVHLRRPKIQTVRLGGQKARRGPILVRVLRRLRLR-WL-KLRYNCMMKK 73

Query: 77  MNELF-----DKDNGGFN--GFLKRILMEISSAVPVLGAS 109
           + E +     D   GG +   F +R+ ME + AVPV+G S
Sbjct: 74  IKEYYQSIIKDMVEGGASVEAFHQRLFMESTFAVPVMGVS 111

BLAST of Csor.00g084450 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.55e-09
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 0

Query: 1   MAQSYESQLQDEAQPL--LLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRK 60
           M Q YE    +E QP   L  G RR  RR +  RR+++  ARLGG+R  R     R +RK
Sbjct: 1   MGQPYEP---EEGQPGAGLRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRK 60

Query: 61  VRMRKWLMKVRCDCKVKKMNELFDK------DNGGF-NGFLKRILMEISSAVPVLGAS 109
           +R+R W+ K++C   VKKM E + +      + G +   +  R+L+E S A+P+LG S
Sbjct: 61  IRLR-WV-KLKCIAMVKKMKEYYTRLMKDIIEAGAYARSYQHRLLLETSFAIPILGVS 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575440.19.92e-73100.00hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013982.14.04e-7299.11hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6593556.11.73e-4268.97hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0059393.11.15e-3359.29hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... [more]
KAE8646502.14.56e-3159.26hypothetical protein Csa_015773 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7UTZ45.56e-3459.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KCH41.34e-3259.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1[more]
A0A067L0E62.36e-1038.46Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1[more]
A0A7J7DGQ98.53e-1039.00Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G01157 ... [more]
A0A6J1GVZ81.55e-0938.14uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g084450.m01Csor.00g084450.m01mRNA