Csor.00g084050 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGGTACCATTCCAAACCTCCCAATCCAGTTCCCAAATTCTTAATTTTTTTTCTAAGTCTAGGCTGTTGTAGTTGCCACAAGAAGCGATCCGTTTCAATAATTCATTTGAATTATTAGGGTTTGAGTATCTTATTCATAATCAATCGGCTTTTCGTTTTCATTTTCCTTCTGCAAACAGCTCAGGTCAAGCAATTTCAAGAACAGCACAAAGTCATGAGCGCTTCTTCTTCTTCTTCACCGGCGCCACCAGCATCGTCGAACACGGCATCTACGTCTTCTTCTTCACTGCCGCAGCCTCCGAAGGAATCATTTGCAAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTGAACCTTGCTGTTGGAGGTAATTTTGTGCATCAGTTTCTGGTTGTTTTGTTAATGTGTGTTCGATCGAGAGCGTTAAATTCCAAAACGGGAAATCGGAGTCTTTGTTTAGGATTGATTGGTACTCTCTGTTGAAATTTGTGGTGGATCAATTTCTTTAGATTTGTTCAATTCCGTTCTCTTCTTTCTGGTACACATAGGTTTGGATCTCTTAGTCATTTGTCTGCTGGGAGATGAGTCGTTTTAATATATTTGACTGCATGGTAAAGATATGTGTGGAACAATCACAGAAAGGAAAATGGGGAACTGAATTGCTAATGACTTTTCATGTTTCTTCTGTTAGTTTTGTGTACAATAAAACATCCCACCCTAGCTATGTAGATATCTTCATTCAGAGGAGCTCTGTACGTTTTGTTGTTTAGTCACGGCGGAGTTGGGAATGATCAGTTTACGGTGTGATTCAAGAATATGTAAGCATGAAATATTGATCAGAAACTAAAACTGAGTATGTGCAATAACTTGTTTTTGATGATTTTTATGAGATCCCACGTTAGTTGAGGAGGAGAACGAAGAATATGTAAGCATGAAATATTGATCAGAAACTAAAACTGAGTATGTGCAATAACTTGTTTTTGATGATTTTTATGAGATCCCACGTTAGTTGAGGAGGAGAACGAAGCATTCTTTATAAGGTGTGGAAACCTCTTCATAGCAAATGTTTTTTAAAAACCTTGAAGGGAAGCCTGAAAGGAAAGGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAACCATTACAATTCTGTAGAATACTCTCTTCGAGTGAAGGATGGTCTGCTGTGACAAGCTAGCACAGTAGTACTTTCCAAGTGTCTTGGTAAATCTATACCGTGTCATGGGTTAATTGAAGTTGTTTTTTGGTAGCGAGATACATAGTAATGAGGGAGAAAGAGACGGATAGGGTGGGAATGGCCGACAATCATTGGTGAACCTTCCCTTTAACCGGTCGTGAGTTCTCAACTGAGTTGTTTAGGTTTTGGAATTCCCTCTAAGGGGGTTTCGGTTCGAAGGGTAGAAAATGTATGTGGTGCGGGTTAATCTCTCTCGACTAATTCAGGTGAAAGAGAAGGGTCATCGAGGGTACCCAGACGTCGTGAGTGTTCGAGAGGCTGGAATTGGAGTTGTCGTGAGTGTTCGAGAGGCTGGAATTGGAGTTGTCTTCAATCCAGCGATCCTTCTCTTTTTAAGTAGGCCAAAGTCGGAGGCTAAATTAGTGCCACACTATGGTTAGACTGAGTGAGTTTTTCCCTCTTTATCTACATTCGTCAGAGGGAGAGGCTAGCACCAAACGCAAGGTTTTTTAAATGGGGAGGGATGATTTGATATCATCGACTCACTTTTCCAACGACGCGATCTTTTCTGTCCCGAGTAAGGGAAGACTTTTCATTAACCTTTTTGAAAATCCTTATAGTTTTCTATCTTGCATTTGGCCTTAGGATTCTGAGAGAATAAATCTCCATCCTTGGTGTTTGTCATCTTCATTGTAAACACCTCAGGTGTCTCGAGCTTCAAACATTCAGCTTCGCTCCTTATTTTATTGGTCTCACAAGCACTAAGTTTAAGTCAGTTCTTTGCCAGATAAAGAAGATGATTGTAACCTTCCACGATTTCACTCTACAACAATTTATCCGAAAACAACAATTTAACCTTTTGGATGTAAATAGGTGTTTGTTTGGTTCTTTCTCCTTCTTCACAAATTTAATAGCATTATAGCACAGTAGGCTCCCTTCCTTCTTCATCCTTTAAACTTCTTGTTGTGATATGCCAATTCTACAAGAAGAAGCCCGTATTGTATTTATAATTCAATTTATACTCCACCATCACATACAAACTTTGGTACATTAGAGCCTGAGAGAGTTTATCCCTTGCCAAACATCCTCTCAAAAGTCAAATCAATCTACCATTTCAATCTTTTAATTACTTAATACAGTGTTCTTCATTTTCTTGCAATATGACAAGAGAATGCTGGGCTTAGCTGTTCAATTTCTTTGGCATTAGTTTGTCTTGCTCTTTATCACGAGGAGGTGGTGATTCCACTATTACAGGGTCCTATCCTAAGAGGTCACAAGGGTTTTGTGGAACAACGCTGTGGGCTCAATCTTTTGGCAGTTGTGGCTCGCTAGAAACCAAAGGACATTTAAAGGGATCGAGTTGAGCATGGATTACCTATGGGACTGCATTTAGTTTTGTTCTTCCTTTGGGTGCGTCAGTTACAAACATTGTTGTAATCGTGATCGATAATTCAATAATGGTCCTCCTTGGACATAATCTTGTGTCTCAAGTTGAGATTATGATATGCATTAATTTATTCTCGATTGTCATGTTTTCTTCTCATTTCCCTTAGGGGAGGAAAAACGCTTGTTATTATGAACGCCCTAAATGCCCAACCTAATGAAGCCAAGGTCCGCAATTTCCTCGTCCACCAGCTGTAGGTTGAGTGTCCTTTTCAAGGAAATATAGAATAACAAGAACATTCTAATAGGTTTATTCATGTTTTTCGTGGTTTGGCAGGTTGGGGTTCAGAAACTTATCATCTTGCAATCGTTTTGATTCAGTAGACGTCTTTGATTTTAGGAACATTTACTTGCTTTTGCATAAACTGATAGAAGTCTTTTAACTGTGTAGCTTATCTGCTTATGAGGACAAAGAAGCAAGATGAACAAGTAACTGAAGAAGAGGCTGCCCCGGATTCAGCGAAAACTGCCAAGATAGCTGCCCCTGTTGTTGAGGAATCATTTGCCAAACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCAGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAACGCAAGATAAAACCGAAGGATCGTGAAGAGAAGAAACGCATCGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATTCCTAACCTTTAA ATGAGCGGAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGCTCAGGTCAAGCAATTTCAAGAACAGCACAAAGTCATGAGCGCTTCTTCTTCTTCTTCACCGGCGCCACCAGCATCGTCGAACACGGCATCTACGTCTTCTTCTTCACTGCCGCAGCCTCCGAAGGAATCATTTGCAAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTGAACCTTGCTGTTGGAGCTTATCTGCTTATGAGGACAAAGAAGCAAGATGAACAAGTAACTGAAGAAGAGGCTGCCCCGGATTCAGCGAAAACTGCCAAGATAGCTGCCCCTGTTGTTGAGGAATCATTTGCCAAACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCAGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAACGCAAGATAAAACCGAAGGATCGTGAAGAGAAGAAACGCATCGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATTCCTAACCTTTAA ATGAGCGGAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGCTCAGGTCAAGCAATTTCAAGAACAGCACAAAGTCATGAGCGCTTCTTCTTCTTCTTCACCGGCGCCACCAGCATCGTCGAACACGGCATCTACGTCTTCTTCTTCACTGCCGCAGCCTCCGAAGGAATCATTTGCAAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTGAACCTTGCTGTTGGAGCTTATCTGCTTATGAGGACAAAGAAGCAAGATGAACAAGTAACTGAAGAAGAGGCTGCCCCGGATTCAGCGAAAACTGCCAAGATAGCTGCCCCTGTTGTTGAGGAATCATTTGCCAAACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCAGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAACGCAAGATAAAACCGAAGGATCGTGAAGAGAAGAAACGCATCGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATTCCTAACCTTTAA MSGEEPPKLYANKPKKAQVKQFQEQHKVMSASSSSSPAPPASSNTASTSSSSLPQPPKESFARRYKFLWPMLLTVNLAVGAYLLMRTKKQDEQVTEEEAAPDSAKTAKIAAPVVEESFAKPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNL Homology
BLAST of Csor.00g084050 vs. NCBI nr
Match: KAG6575480.1 (hypothetical protein SDJN03_26119, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014023.1 hypothetical protein SDJN02_24194 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 332 bits (852), Expect = 2.25e-114 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Csor.00g084050 vs. NCBI nr
Match: XP_022954191.1 (uncharacterized protein LOC111456527 isoform X1 [Cucurbita moschata]) HSP 1 Score: 325 bits (834), Expect = 1.38e-111 Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Csor.00g084050 vs. NCBI nr
Match: XP_023548106.1 (uncharacterized protein LOC111806841 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 324 bits (831), Expect = 3.97e-111 Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Csor.00g084050 vs. NCBI nr
Match: XP_022992414.1 (uncharacterized protein LOC111488728 isoform X1 [Cucurbita maxima]) HSP 1 Score: 317 bits (812), Expect = 3.23e-108 Identity = 179/187 (95.72%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Csor.00g084050 vs. NCBI nr
Match: XP_038898399.1 (uncharacterized protein LOC120086050 [Benincasa hispida]) HSP 1 Score: 277 bits (709), Expect = 1.54e-92 Identity = 160/189 (84.66%), Postives = 165/189 (87.30%), Query Frame = 0
BLAST of Csor.00g084050 vs. ExPASy TrEMBL
Match: A0A6J1GQ86 (uncharacterized protein LOC111456527 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456527 PE=4 SV=1) HSP 1 Score: 325 bits (834), Expect = 6.70e-112 Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of Csor.00g084050 vs. ExPASy TrEMBL
Match: A0A6J1JXH4 (uncharacterized protein LOC111488728 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488728 PE=4 SV=1) HSP 1 Score: 317 bits (812), Expect = 1.57e-108 Identity = 179/187 (95.72%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Csor.00g084050 vs. ExPASy TrEMBL
Match: A0A6J1GQB7 (uncharacterized protein LOC111456527 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456527 PE=4 SV=1) HSP 1 Score: 273 bits (698), Expect = 1.36e-91 Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of Csor.00g084050 vs. ExPASy TrEMBL
Match: E5GCA6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.13e-90 Identity = 157/184 (85.33%), Postives = 161/184 (87.50%), Query Frame = 0
BLAST of Csor.00g084050 vs. ExPASy TrEMBL
Match: A0A1S3CGT4 (uncharacterized protein LOC103500733 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500733 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.13e-90 Identity = 157/184 (85.33%), Postives = 161/184 (87.50%), Query Frame = 0
BLAST of Csor.00g084050 vs. TAIR 10
Match: AT1G55160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39 Identity = 105/187 (56.15%), Postives = 128/187 (68.45%), Query Frame = 0
BLAST of Csor.00g084050 vs. TAIR 10
Match: AT1G55160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 148.3 bits (373), Expect = 6.1e-36 Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 0
BLAST of Csor.00g084050 vs. TAIR 10
Match: AT1G55160.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35 Identity = 105/212 (49.53%), Postives = 129/212 (60.85%), Query Frame = 0
BLAST of Csor.00g084050 vs. TAIR 10
Match: AT2G19530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55160.2); Has 461 Blast hits to 346 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 89; Fungi - 28; Plants - 57; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17 Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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