Csor.00g084030 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCACCTACGGTACAATCCCCACCTCCGCCGCTCCTGGAACCTCCTCCAACCTCGAATTCTTCTCCCGCGGTAAACAGCGTCTCGAAGCCGGTTTCGCCACTCGTGCTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCACTCTCCCTTTCAACTTCCGCGACACTTTCTCTCGCGTCAAAACCAACATTGCCTACTTCCGTATGAATTATGCAATCATCGTCCTCTTCATCCTCTTCTTGAGCCTCCTGTGGCATCCGATCTCCCTCATAGTCTTCACCGCCATGCTTGCCGTTTGGTTGTTCCTCTACTTCCTTCGCGACGAGCCTCTGATCCTCCTCGGCCGTTTGATTGACGATCGAGTGGTTTTGGCTGTGCTGTCAGTGTTCACACTTGTGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGTTGTCGATTCTGATCGGCGCCGTACTACTGCTGATCCACGCCGCTGTGAGGAAGACGGATGATCTGTTCTTGGATGAAGAAGCTACAGCGGTCTTCACCGTCGGTTCGCGTGCTCCTGGATCTTCAATTTCCGGTTATTCACCGTAATGTTTAATTTGATTTCTTCAATCATTTCGAATGAAATTAGTAGTTTCTTTATTCATCTTTTTTCTAGTTTTGAGTTCGTTCAATCATCTTCTACGGAATCCATCCTCCAATAGAGGAAAAATTCATTAGTCTTGAAGTCGAAGAGAATTGGATTTTCTCTCATTCAAGCAGAATTTGGGGATTTGATTTCCACTAGAACCACCTCGAAATCGATTTAGGGTTTTCTTTTTTAGTGAATGAGATGGAACTAGAAACAAACATCGCTCGAAATCATTTTTAGAAAATTTCAATAATTACTTATCAACTTACATGTTCATATACATAAATTTCTTTGCAACTTCGTCAAATTAAACACAAAAATTAGATAATCGTTTCAGTTTTTTCAGATTCTCTGTATTCAATGTGGAAAATAGTATGATGTTCTTTTATGTCTAGGTTAGGTAGACCCATCTCATAGACACTCGTAACTATCATATAACGTTCTTCGTTCTTACTCTACTCGTTAGGGGTGAGCATCGATCGATAAGTGTCAATTTTAGGTACAATTGACACTAGAAAACCAACCTATCAATTTTAATCCGTTGGTAGTTGACGGTTTTATAGTCATATATGTCCAAGTCAATGTAACATTTGTTGGACTAAACTGATCAATTTGTTTGACGTACATCAAAACCGTCCACGTCGATCTTGGCTACATATACCAACCCCATGGCCCAAGAGAGTCCTCGTGGGCGTCGACCATCGTACGAAGAGAGCTAGCTCATCAAGGTCGGTTTCCATTGTTGGTTATGCAACGATTCTCTCTTGCTCGATGCATTCCAAGAATCTCGACGAGCTCAACCTTTTGTTACGCTATAAAATATTTAGATGATATTTGAAAATAAAATATACTACTTTCTAATTCTATTTCATCAATGATTTAAAATTCTTATTAAATCCAAAACCAATATTTTAATACTTTTAAATTATAAAAATAGACCGTTCTCGAATCAGAACTAAACACAAAACACAGCGGAGAGGAATTTTTACCCACTTGAACATGATAAACCCAGTCGGACCTTTTCAGACTCCGCCGTGCTCGGAGTACGTCTGCCCCGATCTCCACCATTCTCCCCCGTTAATTCCACCGGCATTTCGCCGAATGCTCACCAGCCTTACGATCCTTACTACATCTATAATCTACCGACGCGCTCTTCATCTCCGGTCTCCCTGACGATGTCAAGGCTCGCGAGATTCACAACCTTTTCCGCCGCCGGCCGGGATTCAAGTACTTTTCATGTTCACACCTGTCTTTTCTCTTATTCATTATGCAGATTTGTAGTATCTCTTTGCCTCCAATTTTTAATGTGTAGTCTACATTTTTTTGCATATTTCCTGCTACATAATCTGAATTTTGGGGCTCCCGTGCATATTTGATGTTTTGTTATACATTCAGGAGGCAGTGAACCAGACGAACCATCAAAAAAAGCTGAACAAAGGTTCGAAAAGCAATAAATAAAAGTTTAATTACTCTCAAATATAATATTAGAAGATGTAGCATCGCTGGGAGGTTGAGTATTTTGTTTGTTGTTCTTGTCTGAAATATGCAGCGATGAGGCTTTGATGACTCCTGGTAATGCTCTACCTGCTCCATATGTACGTCAATCTATCTTCCCTGTTAGATTCTAG ATGACCACCTACGGTACAATCCCCACCTCCGCCGCTCCTGGAACCTCCTCCAACCTCGAATTCTTCTCCCGCGGTAAACAGCGTCTCGAAGCCGGTTTCGCCACTCGTGCTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCACTCTCCCTTTCAACTTCCGCGACACTTTCTCTCGCGTCAAAACCAACATTGCCTACTTCCGTATGAATTATGCAATCATCGTCCTCTTCATCCTCTTCTTGAGCCTCCTGTGGCATCCGATCTCCCTCATAGTCTTCACCGCCATGCTTGCCGTTTGGTTGTTCCTCTACTTCCTTCGCGACGAGCCTCTGATCCTCCTCGGCCGTTTGATTGACGATCGAGTGGTTTTGGCTGTGCTGTCAGTGTTCACACTTGTGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGTTGTCGATTCTGATCGGCGCCGTACTACTGCTGATCCACGCCGCTGTGAGGAAGACGGATGATCTGTTCTTGGATGAAGAAGCTACAGCGGTCTTCACCGTCGGTTCGCGTGCTCCTGGATCTTCAATTTCCGACTCCGCCGTGCTCGGAGTACGTCTGCCCCGATCTCCACCATTCTCCCCCGTTAATTCCACCGGCATTTCGCCGAATGCTCACCAGCCTTACGATCCTTACTACATCTATAATCTACCGACGCGCTCTTCATCTCCGGTCTCCCTGACGATGTCAAGGCTCGCGAGATTCACAACCTTTTCCGCCGCCGGCCGGGATTCAAGAGGCAGTGAACCAGACGAACCATCAAAAAAAGCTGAACAAAGCGATGAGGCTTTGATGACTCCTGGTAATGCTCTACCTGCTCCATATGTACGTCAATCTATCTTCCCTGTTAGATTCTAG ATGACCACCTACGGTACAATCCCCACCTCCGCCGCTCCTGGAACCTCCTCCAACCTCGAATTCTTCTCCCGCGGTAAACAGCGTCTCGAAGCCGGTTTCGCCACTCGTGCTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCACTCTCCCTTTCAACTTCCGCGACACTTTCTCTCGCGTCAAAACCAACATTGCCTACTTCCGTATGAATTATGCAATCATCGTCCTCTTCATCCTCTTCTTGAGCCTCCTGTGGCATCCGATCTCCCTCATAGTCTTCACCGCCATGCTTGCCGTTTGGTTGTTCCTCTACTTCCTTCGCGACGAGCCTCTGATCCTCCTCGGCCGTTTGATTGACGATCGAGTGGTTTTGGCTGTGCTGTCAGTGTTCACACTTGTGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGTTGTCGATTCTGATCGGCGCCGTACTACTGCTGATCCACGCCGCTGTGAGGAAGACGGATGATCTGTTCTTGGATGAAGAAGCTACAGCGGTCTTCACCGTCGGTTCGCGTGCTCCTGGATCTTCAATTTCCGACTCCGCCGTGCTCGGAGTACGTCTGCCCCGATCTCCACCATTCTCCCCCGTTAATTCCACCGGCATTTCGCCGAATGCTCACCAGCCTTACGATCCTTACTACATCTATAATCTACCGACGCGCTCTTCATCTCCGGTCTCCCTGACGATGTCAAGGCTCGCGAGATTCACAACCTTTTCCGCCGCCGGCCGGGATTCAAGAGGCAGTGAACCAGACGAACCATCAAAAAAAGCTGAACAAAGCGATGAGGCTTTGATGACTCCTGGTAATGCTCTACCTGCTCCATATGTACGTCAATCTATCTTCCCTGTTAGATTCTAG MTTYGTIPTSAAPGTSSNLEFFSRGKQRLEAGFATRAPWRLMFDFHSFTLPFNFRDTFSRVKTNIAYFRMNYAIIVLFILFLSLLWHPISLIVFTAMLAVWLFLYFLRDEPLILLGRLIDDRVVLAVLSVFTLVFLFLTNATLNILLSILIGAVLLLIHAAVRKTDDLFLDEEATAVFTVGSRAPGSSISDSAVLGVRLPRSPPFSPVNSTGISPNAHQPYDPYYIYNLPTRSSSPVSLTMSRLARFTTFSAAGRDSRGSEPDEPSKKAEQSDEALMTPGNALPAPYVRQSIFPVRF Homology
BLAST of Csor.00g084030 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 2.1e-51 Identity = 110/181 (60.77%), Postives = 135/181 (74.59%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 6.2e-51 Identity = 112/177 (63.28%), Postives = 136/177 (76.84%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45 Identity = 105/188 (55.85%), Postives = 130/188 (69.15%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36 Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24 Identity = 66/172 (38.37%), Postives = 109/172 (63.37%), Query Frame = 0
BLAST of Csor.00g084030 vs. NCBI nr
Match: KAG6575482.1 (PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 559 bits (1441), Expect = 2.47e-200 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of Csor.00g084030 vs. NCBI nr
Match: KAG7014025.1 (PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 348 bits (892), Expect = 2.48e-118 Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 0
BLAST of Csor.00g084030 vs. NCBI nr
Match: XP_008462362.1 (PREDICTED: PRA1 family protein F3 [Cucumis melo]) HSP 1 Score: 303 bits (775), Expect = 1.53e-100 Identity = 159/190 (83.68%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Csor.00g084030 vs. NCBI nr
Match: XP_022964339.1 (PRA1 family protein F3-like [Cucurbita moschata] >XP_023514624.1 PRA1 family protein F3-like [Cucurbita pepo subsp. pepo] >KAG6593513.1 PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025858.1 PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 293 bits (750), Expect = 8.68e-97 Identity = 157/190 (82.63%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of Csor.00g084030 vs. NCBI nr
Match: TYK03886.1 (cytochrome p450 [Cucumis melo var. makuwa]) HSP 1 Score: 303 bits (775), Expect = 2.07e-96 Identity = 159/190 (83.68%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy TrEMBL
Match: A0A1S3CGR4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103500735 PE=3 SV=1) HSP 1 Score: 303 bits (775), Expect = 7.42e-101 Identity = 159/190 (83.68%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy TrEMBL
Match: A0A0A0K9N1 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_7G451400 PE=3 SV=1) HSP 1 Score: 295 bits (756), Expect = 5.72e-98 Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy TrEMBL
Match: A0A6J1HMV8 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111464378 PE=3 SV=1) HSP 1 Score: 293 bits (750), Expect = 4.20e-97 Identity = 157/190 (82.63%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy TrEMBL
Match: A0A5D3C0B5 (Cytochrome p450 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00810 PE=3 SV=1) HSP 1 Score: 303 bits (775), Expect = 1.00e-96 Identity = 159/190 (83.68%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Csor.00g084030 vs. ExPASy TrEMBL
Match: A0A6J1KJT5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111494658 PE=3 SV=1) HSP 1 Score: 291 bits (744), Expect = 3.43e-96 Identity = 157/190 (82.63%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Csor.00g084030 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein ) HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52 Identity = 110/181 (60.77%), Postives = 135/181 (74.59%), Query Frame = 0
BLAST of Csor.00g084030 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein ) HSP 1 Score: 202.6 bits (514), Expect = 4.4e-52 Identity = 112/177 (63.28%), Postives = 136/177 (76.84%), Query Frame = 0
BLAST of Csor.00g084030 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 ) HSP 1 Score: 184.9 bits (468), Expect = 9.5e-47 Identity = 105/188 (55.85%), Postives = 130/188 (69.15%), Query Frame = 0
BLAST of Csor.00g084030 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 ) HSP 1 Score: 155.2 bits (391), Expect = 8.1e-38 Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 0
BLAST of Csor.00g084030 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E ) HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25 Identity = 66/172 (38.37%), Postives = 109/172 (63.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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