Csor.00g083250 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g083250
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 7552732 .. 7553110 (+)
RNA-Seq ExpressionCsor.00g083250
SyntenyCsor.00g083250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTGGCTACCTTGATCAATGAACACGGGCCCAATTTCCCATATGAATGGCTACTCATGGACAAGGATAGACCCCGTTTCGTGCGTTTTTTCTTTTATTGGCTTTTGAGCTTTCCTCCTGTTTTTTCTTGTCTTTCAGGGACGAGTCCTTGAGACTAAAGACCGACACGCTATGTATCCATTTCCGAGAACAAAGGAGAGGAAAGGAGATAAGGGAGTATTCTCTTCTTCTCTCTTTCTTTCTCTCCTCGTAGCGTCACAAGCCGAAGCTAAAGAGTTCTTTCTAGAGCTGTTTGATGACGCCCAGGAGATAGAAGGTAGTTGGCTTTTGAGTTTTAGCATACCAGTCGATGACCTTGCCCTCACTGTTCTCTAG

mRNA sequence

ATGCCTTTGGCTACCTTGATCAATGAACACGGGCCCAATTTCCCATATGAATGGCTACTCATGGACAAGGATAGACCCCGTTTCGGACGAGTCCTTGAGACTAAAGACCGACACGCTATGTATCCATTTCCGAGAACAAAGGAGAGGAAAGGAGATAAGGGAGTATTCTCTTCTTCTCTCTTTCTTTCTCTCCTCGTAGCGTCACAAGCCGAAGCTAAAGAGTTCTTTCTAGAGCTGTTTGATGACGCCCAGGAGATAGAAGGTAGTTGGCTTTTGAGTTTTAGCATACCAGTCGATGACCTTGCCCTCACTGTTCTCTAG

Coding sequence (CDS)

ATGCCTTTGGCTACCTTGATCAATGAACACGGGCCCAATTTCCCATATGAATGGCTACTCATGGACAAGGATAGACCCCGTTTCGGACGAGTCCTTGAGACTAAAGACCGACACGCTATGTATCCATTTCCGAGAACAAAGGAGAGGAAAGGAGATAAGGGAGTATTCTCTTCTTCTCTCTTTCTTTCTCTCCTCGTAGCGTCACAAGCCGAAGCTAAAGAGTTCTTTCTAGAGCTGTTTGATGACGCCCAGGAGATAGAAGGTAGTTGGCTTTTGAGTTTTAGCATACCAGTCGATGACCTTGCCCTCACTGTTCTCTAG

Protein sequence

MPLATLINEHGPNFPYEWLLMDKDRPRFGRVLETKDRHAMYPFPRTKERKGDKGVFSSSLFLSLLVASQAEAKEFFLELFDDAQEIEGSWLLSFSIPVDDLALTVL
Homology
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BLAST of Csor.00g083250 vs. NCBI nr
Match: KAG6588531.1 (hypothetical protein SDJN03_17096, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216 bits (550), Expect = 8.71e-71
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MPLATLINEHGPNFPYEWLLMDKDRPRFGRVLETKDRHAMYPFPRTKERKGDKGVFSSSL 60
           MPLATLINEHGPNFPYEWLLMDKDRPRFGRVLETKDRHAMYPFPRTKERKGDKGVFSSSL
Sbjct: 1   MPLATLINEHGPNFPYEWLLMDKDRPRFGRVLETKDRHAMYPFPRTKERKGDKGVFSSSL 60

Query: 61  FLSLLVASQAEAKEFFLELFDDAQEIEGSWLLSFSIPVDDLALTVL 106
           FLSLLVASQAEAKEFFLELFDDAQEIEGSWLLSFSIPVDDLALTVL
Sbjct: 61  FLSLLVASQAEAKEFFLELFDDAQEIEGSWLLSFSIPVDDLALTVL 106

The following BLAST results are available for this feature:
BLAST of Csor.00g083250 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g083250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588531.18.71e-71100.00hypothetical protein SDJN03_17096, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g083250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g083250 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g083250.m01Csor.00g083250.m01mRNA