Csor.00g082960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g082960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transmembrane emp24 domain-containing protein p24delta9-like
Location	Csor_Chr05: 7071263 .. 7074471 (+)
RNA-Seq Expression	Csor.00g082960
Synteny	Csor.00g082960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTTCCTTCGCCGTTTTTCAGCTCCTCCTACTCATCGGATTTCTTTCTTCTGGATCGGAATCTCTTCGATTCGACTTGCAGTCCGGCCACACCAAATGCATCTCCGAGGACATTAAGCAGAACGCCATGACTGTCGGGAAGTATCACGTTGTCAATCCCAACGAAGCCCACCTTTGACTGATGATCGCAAGCTTGTTGTTAGGGTATGGTTTTTTTGGGAGGATTTCTTGATTTTATTTTTTTTTTTTTTTTTTTTTAGGGTTTTTGATCGATGAGTGATGCTTGATTTAGGGTTTTGGAATCTGTAGGTGACTTCGACTACTGGGAATACGTTCCACTATTCCGACAAGGTGGAATCGGGGCAATTCGCGTTCGTTGCTGGGGAAGGGGGTGATTTCATGACCTGCTTTTGGGTTCCTGATCACAAGCCTCAAGTAACATTAACGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCAAGCAATGGTCCAGTGTTGCTAAGAAGGGCGATGTCGAAGTAAGTTTTTGATTGTGTTCACAAATCTAGATTCAACTTCGTTCCTTTTGATGGCTTCTGTTTTCACCTTTTGCTAGTTTTAGAGGATTTTGATTGGCGTTTTTATTCGACATTTCAATTCTTTGTGAAGCTTTGATTCTCTGGATTTGAGGAATTTACTATTCTTTGCTTGTATTAGTAATATCTTCCTGCCTAGACTTTCTTTTTCATTGAACAACCTTGAGTTCCTTTCAAGTAGCAAACTCCAAGCAATCGTTGACTTCGTTCAACCACAGAGTTGTTTTGTTATCCTTCTTCTTAATCTATGCTCAACCGAATTATGTTTCTTTTGTGGAATTAGCAAATGTCAAGAATAGTTGAAGCATTGTAGTGGGGAATTTCAAATCTAGTCCTTCGTCCCCGGCTTCTTTCGGTTCATGTTTTTGGAACTAGAGTTAGCAAAAGAGGTAGGGAATCTGCTCAACTAGGTGTCACAATCGCACTTTTGTGGTTGTGGATAATGATTGTGTCACACTTGTTCTAACTCAACAAAGAAGTTAGCTGTGTGAGATTCGGACTTCACGGACAATATTGGTATATACTTGAGTCTCGAGTCATGTTTGAGAGAGATGTTTTATAAAACGTGAGTGAGGTAATACGTTGAAAACAATTTTTAAAAAAGCAATGTTATAGGCCAAAAGTGAATAAGCGGTAGGAAAAATTGACGACTAGTCATGTCCCCAATAGTACATTTTGGGGCATTTTAGACCTGGTGAGTGTAAACATGATTTTGGTGACACAACAAGAATAGTAAAGACCTATCTGACATGAAAGCAAGTAAAAAGGGTTTGGATCAGACATGCAACCATGGACAACACGTCATGACAAGCATGATCGAGACATCCAACACGTCATGGACAAGCATGATTGAGACATCCAACACGCGGCCACAGGCAACACGTCTTGGACAAGCATGACCGTGGCATTAGGCACCTATCTCTCCAACATAATGTCCGAGGCTTCATTTCCCTCCCTTAGGATTGTTGACGGCTCAAAAAGAGGTTTGGGGTTGGCAACATTTGGCCAGGGATTGTGGTCAATTCTAGATGCCCTTTAACCTCTCATTGTTCAAATAAAAAAAGAAAGGTGAGTCAAAAAACTAACATGTCCAAGTTCAGAGAAAAGTTCTTCGAGAGCTCCATAAGCCCAGGGGAGGCTTATTGTGCTTATCTTACTATGAACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTTCTCCATTGATCCCCTTTGCTTATGCTCAAAGTCCAAGCTCATTGTGGAGAGTCGTGATTCCTAACAACAAGGTCTAGTTCGGGATGTCTTATCCTTCTCTTTCCAGTATAAAAATAAGATCTTTAAATCAATACGATGACTCAACTTTTTTTTTCCCTTTTGCCACTCAAGATCTGCATCCCCTCTAAATTTAGAGCCACTGTTCTTTGTTGTTTGAAAGAAGTCATATAATTAGGTTAGATACATTAACAATGGCTGTAGTGGAGAGCATGACACAGCCTCCCGAACACAATTTTCACTCGCCAAGTTTTCTCGGTATTCTTTCTCCTATGGTACTAACAATCTTATTGCTGATTCTCTCTTAAGAACAAACTTATACAATTCATAAAGAGCCCCGGCACCATTATTTTTGCTATTAAAGTCCTACACTATTTACTATTGTTTGCTTGCATTAGACAAATCTAGATTCAACTTTGTTCAAATAGTCCATTTTCAGAATCCCTATTGCTGTATCTAAGAACATTTGAAAAGCGTTTGGATTGTTTTTGTGGAAAGGTGCTGACAGTAGCTAGGGGTGTCAATTAAAATACAAAAACTGGAAAGGGTCTTACAGCCCATGAAAGGAGATTACAAAGCTCAACAAATTGTTTTAGCTTAATATTGGGTAAAAGGTGGGGTTTTTGTAGTGAAATCCTTTTTGGGATGACATCTGGTTAGGGTGACCATTCCCTTAATTTTTCATAATTTCTGACACGATTGATTGTTGAACAAGGTTGGAACCCGGGTGTTGGTAACTCGAATCTAGAGTTGAGGAGAGGCTCGTTCGATAGGGAGTTGGAAGAAACAAAAATTGAAATACGAAAATGAAGTTAGGAAGATAAACTTAAAAGTGTAAGTTTATTGGTTTGATTTGTGTTACATTAAAATGCTTTTATACAAATGTCAAATTACTATAAAAGACGACTATTAAACGCTATGAACTTGTAACTTCAAATGCTGATGTTGTTGCTTCAATGGCTGCTTTCATAATTTTGGTTGTACGACACAGATCTATACGGCACACGTGTTGTTTGTATTTTCAATTCTAATAAATTGCTGAAATACGTTGTTCGGGTTATTTTCCCAAATCTCGTGCGCTATGCCATTAACGCTTGCCTTACAATGCCAGGCTATGGAATTTGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGGTAAACAGAACAAAGCTCTATCTCTCTCTCACTCTGTTTACGGAATTGGTATTACTCGATCCCGATCCCGATTCACCTCAACAGCCTTACACGTGATTTTTGTTCTGTGTTGGCCTGAAATGAAATTTTTGAACAATGTACGATGGCAGGGAGGAAGAAATGCAAGATCTGA

mRNA sequence

ATGGTTCCTTCCTTCGCCGTTTTTCAGCTCCTCCTACTCATCGGATTTCTTTCTTCTGGATCGGAATCTCTTCGATTCGACTTGCACCCACCTTTGACTGATGATCGCAAGCTTGTTGTTAGGGTGACTTCGACTACTGGGAATACGTTCCACTATTCCGACAAGGTGGAATCGGGGCAATTCGCGTTCGTTGCTGGGGAAGGGGGTGATTTCATGACCTGCTTTTGGGTTCCTGATCACAAGCCTCAAGTAACATTAACGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCAAGCAATGGTCCAGTGTTGCTAAGAAGGGCGATGTCGAAGCTATGGAATTTGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGGGAGGAAGAAATGCAAGATCTGA

Coding sequence (CDS)

ATGGTTCCTTCCTTCGCCGTTTTTCAGCTCCTCCTACTCATCGGATTTCTTTCTTCTGGATCGGAATCTCTTCGATTCGACTTGCACCCACCTTTGACTGATGATCGCAAGCTTGTTGTTAGGGTGACTTCGACTACTGGGAATACGTTCCACTATTCCGACAAGGTGGAATCGGGGCAATTCGCGTTCGTTGCTGGGGAAGGGGGTGATTTCATGACCTGCTTTTGGGTTCCTGATCACAAGCCTCAAGTAACATTAACGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCAAGCAATGGTCCAGTGTTGCTAAGAAGGGCGATGTCGAAGCTATGGAATTTGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGGGAGGAAGAAATGCAAGATCTGA

Protein sequence

MVPSFAVFQLLLLIGFLSSGSESLRFDLHPPLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVAASNGPVLLRRAMSKLWNLSCRSCLKLPILFKKRCIISVKGRKKCKI

Homology

[Close]

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           P     K+ +RVTS+ GNT+H+++ VESGQFAF A E GD+M C+   DHKP+VTL++DF
Sbjct: 61  PSPQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDF 120

Query: 91  DWRTGVAASNGPVLLRRAMSKLWNLSCRSCLK 123
           DWRTGV + +   + +++  ++     +  ++
Sbjct: 121 DWRTGVQSKSWSSVAKKSQVEVMEFDVKRLIE 152

[Close]

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-18
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 7   VFQLLLLIGFLSSGSESLRFDLH-----------------------------PPLTDDRK 66
           ++ +LL++   S  S SL FDLH                               L    K
Sbjct: 8   LWTMLLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQALPQTHK 67

Query: 67  LVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVA 122
           + V+VTS +GN +H++++V+SGQFAF A E GD+M CF   DHKP+V+L++DF+W+TGV 
Sbjct: 68  ISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQ 127

[Close]

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.7e-18
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           PL    K+ VRVTS  G  +H SD VESGQF+FVA E GD+++CF   DHKP+ TL +DF
Sbjct: 59  PLPSSHKVTVRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCFSAVDHKPETTLIIDF 118

Query: 91  DWRTGV 97
           DWRTG+
Sbjct: 119 DWRTGI 124

[Close]

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-15
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           PL D  K++V+V    G   H +DKVE+GQF+F A E G ++ C    D+KP+ TLT+DF
Sbjct: 60  PLPDSHKIIVKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDF 119

Query: 91  DWRTGV 97
           DW+TGV
Sbjct: 120 DWKTGV 125

[Close]

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.5e-14
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 32  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 91
           L    KL V V+S  G + H+++ VESG+F F A E GD+MTCF  P ++P     VDF+
Sbjct: 73  LPPSHKLFVTVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCFVAPGYRPTAKFAVDFE 132

Query: 92  WRTGVAASNGPVLLRRAMSKLWNLSCRSCL 122
           W++GV A +   + +R    +  +  R  L
Sbjct: 133 WKSGVEAKDWTTIAKRGQITMLEVEVRKLL 162

[Close]

BLAST of Csor.00g082960 vs. NCBI nr
Match: KAG6599018.1 (Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292 bits (747), Expect = 1.22e-99
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHPPLTDDRKLVVRVTSTTGNTFHYSDKVESGQ 60
           MVPSFAVFQLLLLIGFLSSGSESLRFDLHPPLTDDRKLVVRVTSTTGNTFHYSDKVESGQ
Sbjct: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHPPLTDDRKLVVRVTSTTGNTFHYSDKVESGQ 60

Query: 61  FAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVAASNGPVLLRRAMSKLWNLSCRSC 120
           FAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVAASNGPVLLRRAMSKLWNLSCRSC
Sbjct: 61  FAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVAASNGPVLLRRAMSKLWNLSCRSC 120

Query: 121 LKLPILFKKRCIISVKGRKKCKI 143
           LKLPILFKKRCIISVKGRKKCKI
Sbjct: 121 LKLPILFKKRCIISVKGRKKCKI 143

[Close]

BLAST of Csor.00g082960 vs. NCBI nr
Match: XP_023520474.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181 bits (459), Expect = 8.64e-55
Identity = 95/127 (74.80%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. NCBI nr
Match: XP_022999144.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita maxima])

HSP 1 Score: 181 bits (459), Expect = 8.64e-55
Identity = 95/127 (74.80%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAVTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. NCBI nr
Match: XP_022946917.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita moschata])

HSP 1 Score: 179 bits (453), Expect = 7.02e-54
Identity = 94/127 (74.02%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKP VTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPPVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. NCBI nr
Match: KAG7029979.1 (Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179 bits (453), Expect = 7.02e-54
Identity = 94/127 (74.02%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKP VTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPPVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL
Match: A0A6J1KG82 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima OX=3661 GN=LOC111493615 PE=3 SV=1)

HSP 1 Score: 181 bits (459), Expect = 4.18e-55
Identity = 95/127 (74.80%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAVTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL
Match: A0A6J1G4Y0 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moschata OX=3662 GN=LOC111450856 PE=3 SV=1)

HSP 1 Score: 179 bits (453), Expect = 3.40e-54
Identity = 94/127 (74.02%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MVPSFA FQLLLLIGFLSSGSESLRFDL                               P
Sbjct: 1   MVPSFAAFQLLLLIGFLSSGSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEAQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 98
           LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKP VTLTVDFD
Sbjct: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPPVTLTVDFD 120

[Close]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL
Match: A0A6J1I761 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima OX=3661 GN=LOC111471862 PE=3 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.04e-47
Identity = 83/129 (64.34%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MV  FA F L+ LIGFLSSGSESLRFDL                               P
Sbjct: 1   MVRFFAAFHLIFLIGFLSSGSESLRFDLQSGHTKCISEDIKHNAMSVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 100
           LTDDRKL+VRVTS TGNTFHYSDKVESGQFAFVA E GDFMTCFW PDH+PQVTL+VDFD
Sbjct: 61  LTDDRKLIVRVTSATGNTFHYSDKVESGQFAFVAAEAGDFMTCFWAPDHQPQVTLSVDFD 120

[Close]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL
Match: A0A6J1GJ98 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moschata OX=3662 GN=LOC111454720 PE=3 SV=1)

HSP 1 Score: 158 bits (399), Expect = 5.16e-46
Identity = 81/129 (62.79%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MV  FA F L+ LIGF+SSGSESLRFDL                               P
Sbjct: 1   MVRFFAAFHLIFLIGFMSSGSESLRFDLQSGHTKCISEDIKHNAMSVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 100
           LTDDRKL+VRVTS TGNT+HYSDKVESGQFAFVA E GDFMTCFW PDH+PQVTL+VDFD
Sbjct: 61  LTDDRKLIVRVTSATGNTYHYSDKVESGQFAFVAAEAGDFMTCFWAPDHQPQVTLSVDFD 120

[Close]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL
Match: A0A5A7VLH4 (Transmembrane emp24 domain-containing protein p24delta9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00010 PE=3 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.36e-43
Identity = 79/129 (61.24%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 1   MVPSFAVFQLLLLIGFLSSGSESLRFDLHP-----------------------------P 60
           MV  F  FQLL+LIGFLSS SESLRFDL                               P
Sbjct: 1   MVRFFPAFQLLVLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFD 100
           LTD+RKL+VRVTS TGNT+HYSDKVESGQF FVA E GDFM CFW PDH+PQVTL+VDFD
Sbjct: 61  LTDERKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120

[Close]

BLAST of Csor.00g082960 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-20
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           P     K+ +RVTS+ GNT+H+++ VESGQFAF A E GD+M C+   DHKP+VTL++DF
Sbjct: 61  PSPQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDF 120

Query: 91  DWRTGVAASNGPVLLRRAMSKLWNLSCRSCLK 123
           DWRTGV + +   + +++  ++     +  ++
Sbjct: 121 DWRTGVQSKSWSSVAKKSQVEVMEFDVKRLIE 152

[Close]

BLAST of Csor.00g082960 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 7   VFQLLLLIGFLSSGSESLRFDLH-----------------------------PPLTDDRK 66
           ++ +LL++   S  S SL FDLH                               L    K
Sbjct: 8   LWTMLLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQALPQTHK 67

Query: 67  LVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDFDWRTGVA 122
           + V+VTS +GN +H++++V+SGQFAF A E GD+M CF   DHKP+V+L++DF+W+TGV 
Sbjct: 68  ISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQ 127

[Close]

BLAST of Csor.00g082960 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 91.3 bits (225), Expect = 6.9e-19
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           PL    K+ VRVTS  G  +H SD VESGQF+FVA E GD+++CF   DHKP+ TL +DF
Sbjct: 59  PLPSSHKVTVRVTSPQGTAYHESDGVESGQFSFVAVETGDYISCFSAVDHKPETTLIIDF 118

Query: 91  DWRTGV 97
           DWRTG+
Sbjct: 119 DWRTGI 124

[Close]

BLAST of Csor.00g082960 vs. TAIR 10
Match: AT2G03040.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 29  HPPLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTV 88
           H PL D  K++V+V    G   H +D VE+GQF+F A E G ++ C    D+KP+ TLT+
Sbjct: 58  HHPLPDSHKIIVKVMPPQGKNLHEADNVEAGQFSFTAYENGSYVACITAIDYKPETTLTI 117

Query: 89  DFDWRTGV 97
           DFDW+TGV
Sbjct: 118 DFDWKTGV 125

[Close]

BLAST of Csor.00g082960 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-16
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 31  PLTDDRKLVVRVTSTTGNTFHYSDKVESGQFAFVAGEGGDFMTCFWVPDHKPQVTLTVDF 90
           PL D  K++V+V    G   H +DKVE+GQF+F A E G ++ C    D+KP+ TLT+DF
Sbjct: 60  PLPDSHKIIVKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDF 119

Query: 91  DWRTGV 97
           DW+TGV
Sbjct: 120 DWKTGV 125

The following BLAST results are available for this feature:

BLAST of Csor.00g082960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQY3	3.0e-19	42.39	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]
Q8VY92	2.6e-18	32.64	Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana...	[more]
Q8GYG1	9.7e-18	59.09	Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana ...	[more]
O81045	4.5e-15	50.00	Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana ...	[more]
Q9LJV9	8.5e-14	37.78	Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana...	[more]

BLAST of Csor.00g082960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599018.1	1.22e-99	100.00	Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argy...	[more]
XP_023520474.1	8.64e-55	74.80	transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita pepo sub...	[more]
XP_022999144.1	8.64e-55	74.80	transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita maxima]	[more]
XP_022946917.1	7.02e-54	74.02	transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita moschata...	[more]
KAG7029979.1	7.02e-54	74.02	Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argy...	[more]

BLAST of Csor.00g082960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KG82	4.18e-55	74.80	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima...	[more]
A0A6J1G4Y0	3.40e-54	74.02	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moscha...	[more]
A0A6J1I761	9.04e-47	64.34	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima...	[more]
A0A6J1GJ98	5.16e-46	62.79	transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moscha...	[more]
A0A5A7VLH4	1.36e-43	61.24	Transmembrane emp24 domain-containing protein p24delta9-like OS=Cucumis melo var...	[more]

BLAST of Csor.00g082960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26690.1	2.1e-20	42.39	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G69460.1	1.8e-19	32.64	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G14010.1	6.9e-19	59.09	emp24/gp25L/p24 family/GOLD family protein	[more]
AT2G03040.1	1.9e-16	48.53	emp24/gp25L/p24 family/GOLD family protein	[more]
AT2G03290.1	3.2e-16	50.00	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 35..100 e-value: 1.5E-8 score: 34.8
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 31..100
None	No IPR available	PANTHER	PTHR22811:SF145	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24DELTA9-LIKE	coord: 31..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g082960.m01	Csor.00g082960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016020	membrane