Csor.00g082100 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g082100
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	AP complex subunit sigma
Location	Csor_Chr09: 459197 .. 463081 (-)
RNA-Seq Expression	Csor.00g082100
Synteny	Csor.00g082100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCTGTCGGCTTTTTTGGTGATCTTATTAAAGGTAGTCTCAGATTGTAAGGTTTTGACATTATCATTTGATTTTTTGCAGATCCGATTCATACTTTTGCAAAATAGGCAGGGTAAGACCCGTCTGGCTAAGTATTACGTTCCTCTTGAGGAATCTAAAAAGCACAAGGTCGAGCACAAGGTATTTTTCCAATTCCCTCATGAATTTTGTTTCTTAATTCTCCGATTCCAATTTTTTCTTTCCAGGCTAAGTTCTAGGTGGTAACGACTCAGATCGATTGACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCATTTCGGGTTTCCCCTCAAGGTTTAAAATGCGTGTTCTCCTCCCAATCAATATGGGACATCACAATCCATCTCCTCCAGGGCTAGCGTCCTCGCTGGCACTCTTTCCTTCTTCCAATCGATGTGAGACTGCCCCCAAATCCACCCCTTTGGGGCCAGCCCAGAGTCCTTATTGGCACAACGCCCCGTGTCTACCCGATCCACTGCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCAGACTTCCCCTCAAGGCTTTAAAATGCGCTGGGCAAAAGTTTTCACACCCTTGTTAGTAGTTGGTTCTCCTCTTCAACGTGGGTCTTTTCTCTTGATTCAATTGCAGATTCATCCATGGGGTCTTTTCTCTTGATTCAATTGCAGATTCATCCATGGGTGGTTAATAGGGATCCCAAGTTCACAAATTTCGTGTTGAGGTGAGAACTTTTTGTTGTGATTTTGTGGGTTTATTTGATGAAATTTTGATCTTAGGCTGTTGCGTCCCAGTATTTGTCGAAATTCGAAGCTCCATTCTATTCAATTGATTTCGTTGAAGTGGAATGGCGTCAGTCGCCATAGTACGAGAAATGGTTCTGGAAGAAACCAGATTCACAATGAATGAATGAAATGGGGCATTGACAATTAGCTTGTGGAAGATTGGTAGTATTGCCAAACCACTCCCTCTTCCTCTCCTACTTATTTCTCGCGTCTGCAACTCAGACCTAAATTCCCTCTTCTCTGTATTGCTACCACCTCACAGGTTTGCTTCTTTAGATCCCCCTTTTTCCCTTCTCGATTTCGGGTTTCTTGCAATTTCTTCCTTCCCAGGTTTTTTCTTGTGTTGTTTATATTGCCTTCTTTGTTTATTCAATTTTGGCTCGATGGTAATTAGAAACGTGATTCTTATTTGATTACTCGTGGGATCGCATTGTCATTGTGGAGGCTTCGGTTTGAACTTTTGTTGTATTTCGTTTTCTAAATCGAGATTTGATTATGCTTATTTGTTTTGGACAGTTTTTAGTGTTGGGATTGTGCATAATATTATCAGTTTCGATGCGAATGTTTTGTTTGTTGATTCGGTCTGGAGGTTTTCGTTGGTACCTCGATTCTAAGTGGTGTGTTCTTTGTAGAGAGGTTTTGGAGGTTCGGAACCTCGTTCTTTGCTTTATTTGTTTCCCATGTAGATTTAGTTTGAGATCTTGTAGTCAATTGGGATTTGGGATTGTCTGAGATCTCTTAGTCAGGAGTCCACGACCGATGCCCTGTGCTTGAAGAGGTTTTGTTGCATCCACCCTTTCGTGGGAGATGCAGATCGCCTTCACAGGCCGTTCTCTTGATTGTGTTGTGGAACTTTTTTTTATTGGAGAGGATCGTAAGGGTTTTTCAACACAAACTTTAAAGACATTTCAGCACTGAATTTATGATATCCCTTCAAGCAACATTGACTCCCTCCAATCTGCCTCTAAAGTATATCCGACAAACCAAAAGCCTGAAGTAGATTTAGTAGGATGCCTAGCAATAAAAGTAAGAAGACACATAAAAGAACATGAAAAGGAGATAATCTAAAATATCAACGCAGTGCATGATTGCTTGTGTTATCTTTCTTGTTGAATAGGAAGGAACTACGAGCTTAGACTAGGGTGCTTGAGACTATGTAGGCTAGACAGAACCCTAAAATGGGGATACCTCTAAAATACTGTGCATTTAGGCCCGTGAAGCGATTATTAGCAGATCCAGACCCCACTATTCCAACTATTCCAGACCACAATAGGTTTGTGAGACCTTGAAGTTTTTTTTTCTCTCTCTCTCTCTCGAAGCTTATACAGATTCCTGTTATGCCTAAGCTTTTTGTTTTGGGTGAGTCTTTTTCTTTAAATAATTGAAAGTTATGATGTCTTTTGCACCTTCAAGTATTTATTTTTTTCAAAGTCAAAGATAAACAAAATCAACAATTATGCAGAATCGTTTGCTCATCTGCATTCACATTCATCTCAACACAAACTTTAAAGACATTTCAGCACTTTGTGCACCATATTCGGCCTCCGATAACCAATTGGATTTGGATTCGTCGATCCCTTCGTCATTTTCAAGAATGGTCTGGCGGCTTTCTCATTTTGGTGATCTTAAAGGTAGTCTCAGAATGAAGGTTTTGACATTATCATTTGATTTTTTGCAGATCCGGTTTATACTTTTGCAAAATAGGCAGGGCAAGACCCGTCTGGCGAAGTATTACCTTCCCTTCCTCTTGAGGAATCGGAAAAGCATAAGGTCGAATGCGAGGTATTTTTCCAATTCCCTCATGAATTTTGTTTTTAATTCTCTGATTTCAATTTTTTCTTTCCAGGCTAAGTTCTAGGTCTTTTCTTTTGATTCAATTGCAGGTTCATCGATTGGTGGTGAATAGTGATCCCAATTTTAAAATTTTTGTTGAGGTGAGAACCTTTTGTTGTCCCAGTTTTTGGCCGGGATTTGTTTCGTTTCAGTTGCTTTCATCTCGTGTTTTTGTAAGCTCTAACTTATTGCAATCTCCACGACTTTTGCAGTTCCGAACACACAAGGTCATCTACAGACAATATGCTGGATTATTTTTCTCCCTCTGTGTATACAGAACAGACAACTACCTTGAGAGTGTTCGTCTGTTTGTGGAGATTCTTGATCATTTCTTCAGCCATGTGTGTGAGCTCGTTTTGGTTTTTAATTTTAGCAAGGTTTCTTCTTCATTTTCTTACTCTTGCTTCCACAAATTCCTTGCATATTGTTGTGTTGAATCTGATCCTCATTTTTATGCTGAATCTGATGAAGGTCTATCTGATACTTGATGAATTTATTCTTGCTGGAAAACTCCAAGAAACGAGCAAAAAGGTAAAGTATTGTCTGCTTATTTTTAGTAATTGTTTGCTGCGGCAAAACTCCGATGGTCTGACACAAAGGTTATAGGCACCACAAAATCTGCTCGAACCAAGCGCCGCAGATATTCGTTTATATGAAGATCATGTTTATCAGGTGCATTTTTTTTTATAGGCGCAACAAAATTTTCTTCATATCTCTCGTTTTTTGATACATTTTGGAAATTGGATCTGTGGGTAAAGGTTCAGTCGCTGATAGATATGGAGATGTCACTTCGAACCTCGAAGACAAAACTGCTAGCTGGAATAGATTTGATCCGCCAACTGAAGGTATCTGCACTAGAGACCGAGAATGTGAGTAGATTGAAGAGCAAGCGGTCGGAGCTTGAATTTAGGTGCCAAATGGCAGAGAATCTACTAGGTATATTGAAAAAATTAAAGAGCTCCAGCAATGAGAAGTGGAAGGATGGTGTCGTTGGGTTAGGATGCGGAGTGGGGAAGATCAGAACTGACTCATTCAAACTGAAAGAGGAAGTTTCCAGGCTCTCACTATCAATACATTCAACTTCTCAACAAGGAAACAAAAAAATAGGCGGCGGCAGACAGGGAAACAAAAAAAAAGAATTAGCCTCTATTTCAGATCTAATTTCAGATCTAGGGACTCCCATGTTTAACTCTAATTTCAGGGTCCCTAAACTGAAGGACAAAACAAATTTGTGTTAG

mRNA sequence

ATGATCCGATTCATACTTTTGCAAAATAGGCAGGGTAAGACCCGTCTGGCTAAGTATTACGTTCCTCTTGAGGAATCTAAAAAGCACAAGGTCGAGCACAAGATTCATCCATGGGTGGTTAATAGGGATCCCAAGTTCACAAATTTCGTGTTGAGTATTTGTCGAAATTCGAAGCTCCATTCTATTCAATTGATTTCGTTGAAGTGGAATGGCTATTGCCAAACCACTCCCTCTTCCTCTCCTACTTATTTCTCGCGTCTGCAACTCAGACCTAAATTCCCTCTTCTCTGTATTGCTACCACCTCACAGAATCGTTTGCTCATCTGCATTCACATTCATCTCAACACAAACTTTAAAGACATTTCAGCACTTTGTGCACCATATTCGGCCTCCGATAACCAATTGGATTTGGATTCGTCGATCCCTTCGTCATTTTCAAGAATGGTCTGGCGGCTTTCTCATTTTGGTGATCTTAAAGGGCAAGACCCGTCTGGCGAAGTATTACCTTCCCTTCCTCTTGAGGAATCGGAAAAGCATAAGGTCGAATGCGAGGTTCATCGATTGGTGGTGAATAGTGATCCCAATTTTAAAATTTTTGTTGAGTTCCGAACACACAAGGTCATCTACAGACAATATGCTGGATTATTTTTCTCCCTCTGTGTATACAGAACAGACAACTACCTTGAGAGTGTTCGTCTGTTTGTGGAGATTCTTGATCATTTCTTCAGCCATGTCTATCTGATACTTGATGAATTTATTCTTGCTGGAAAACTCCAAGAAACGAGCAAAAAGGCACCACAAAATCTGCTCGAACCAAGCGCCGCAGATATTCGTTTATATGAAGATCATGTTTATCAGGTTCAGTCGCTGATAGATATGGAGATGTCACTTCGAACCTCGAAGACAAAACTGCTAGCTGGAATAGATTTGATCCGCCAACTGAAGGTATCTGCACTAGAGACCGAGAATGTGAGTAGATTGAAGAGCAAGCGGTCGGAGCTTGAATTTAGGTGCCAAATGGCAGAGAATCTACTAGGTATATTGAAAAAATTAAAGAGCTCCAGCAATGAGAAGTGGAAGGATGGTGTCGTTGGGTTAGGATGCGGAGTGGGGAAGATCAGAACTGACTCATTCAAACTGAAAGAGGAAGTTTCCAGGCTCTCACTATCAATACATTCAACTTCTCAACAAGGAAACAAAAAAATAGGCGGCGGCAGACAGGGAAACAAAAAAAAAGAATTAGCCTCTATTTCAGATCTAATTTCAGATCTAGGGACTCCCATGTTTAACTCTAATTTCAGGGTCCCTAAACTGAAGGACAAAACAAATTTGTGTTAG

Coding sequence (CDS)

ATGATCCGATTCATACTTTTGCAAAATAGGCAGGGTAAGACCCGTCTGGCTAAGTATTACGTTCCTCTTGAGGAATCTAAAAAGCACAAGGTCGAGCACAAGATTCATCCATGGGTGGTTAATAGGGATCCCAAGTTCACAAATTTCGTGTTGAGTATTTGTCGAAATTCGAAGCTCCATTCTATTCAATTGATTTCGTTGAAGTGGAATGGCTATTGCCAAACCACTCCCTCTTCCTCTCCTACTTATTTCTCGCGTCTGCAACTCAGACCTAAATTCCCTCTTCTCTGTATTGCTACCACCTCACAGAATCGTTTGCTCATCTGCATTCACATTCATCTCAACACAAACTTTAAAGACATTTCAGCACTTTGTGCACCATATTCGGCCTCCGATAACCAATTGGATTTGGATTCGTCGATCCCTTCGTCATTTTCAAGAATGGTCTGGCGGCTTTCTCATTTTGGTGATCTTAAAGGGCAAGACCCGTCTGGCGAAGTATTACCTTCCCTTCCTCTTGAGGAATCGGAAAAGCATAAGGTCGAATGCGAGGTTCATCGATTGGTGGTGAATAGTGATCCCAATTTTAAAATTTTTGTTGAGTTCCGAACACACAAGGTCATCTACAGACAATATGCTGGATTATTTTTCTCCCTCTGTGTATACAGAACAGACAACTACCTTGAGAGTGTTCGTCTGTTTGTGGAGATTCTTGATCATTTCTTCAGCCATGTCTATCTGATACTTGATGAATTTATTCTTGCTGGAAAACTCCAAGAAACGAGCAAAAAGGCACCACAAAATCTGCTCGAACCAAGCGCCGCAGATATTCGTTTATATGAAGATCATGTTTATCAGGTTCAGTCGCTGATAGATATGGAGATGTCACTTCGAACCTCGAAGACAAAACTGCTAGCTGGAATAGATTTGATCCGCCAACTGAAGGTATCTGCACTAGAGACCGAGAATGTGAGTAGATTGAAGAGCAAGCGGTCGGAGCTTGAATTTAGGTGCCAAATGGCAGAGAATCTACTAGGTATATTGAAAAAATTAAAGAGCTCCAGCAATGAGAAGTGGAAGGATGGTGTCGTTGGGTTAGGATGCGGAGTGGGGAAGATCAGAACTGACTCATTCAAACTGAAAGAGGAAGTTTCCAGGCTCTCACTATCAATACATTCAACTTCTCAACAAGGAAACAAAAAAATAGGCGGCGGCAGACAGGGAAACAAAAAAAAAGAATTAGCCTCTATTTCAGATCTAATTTCAGATCTAGGGACTCCCATGTTTAACTCTAATTTCAGGGTCCCTAAACTGAAGGACAAAACAAATTTGTGTTAG

Protein sequence

MIRFILLQNRQGKTRLAKYYVPLEESKKHKVEHKIHPWVVNRDPKFTNFVLSICRNSKLHSIQLISLKWNGYCQTTPSSSPTYFSRLQLRPKFPLLCIATTSQNRLLICIHIHLNTNFKDISALCAPYSASDNQLDLDSSIPSSFSRMVWRLSHFGDLKGQDPSGEVLPSLPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDHFFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTSKTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSSSNEKWKDGVVGLGCGVGKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDLISDLGTPMFNSNFRVPKLKDKTNLC

Homology

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BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot
Match: Q84WL9 (AP-2 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=AP17 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.8e-33
Identity = 79/110 (71.82%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN D  F  FVEFRTHKVIYR+YAGLFFS+CV  TDN   Y
Sbjct: 21  VPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYAGLFFSVCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSH------------VYLILDEFILAGKLQETSKKA 266
           LES+ LFVEILDHFFS+            VYLILDEFILAG+LQETSK+A
Sbjct: 81  LESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRA 130

[Close]

BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot
Match: O50016 (AP-2 complex subunit sigma OS=Zea mays OX=4577 GN=AP-17 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.3e-32
Identity = 77/111 (69.37%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLE+SEKHKVE EVHRLVVN DP F  FVEFRTHKVIYR+YAGLFFS+CV  TDN   Y
Sbjct: 21  VPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSICVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHV--------------YLILDEFILAGKLQETSKK 265
           LE + LFVEILDHFFS+V              YLILDEFILAG+LQETSK+
Sbjct: 81  LECIHLFVEILDHFFSNVCELDLVFNFHKVYRYLILDEFILAGELQETSKR 131

[Close]

BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot
Match: Q7SAQ1 (AP-2 complex subunit sigma OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=aps-2 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.2e-19
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKI-FVEFRTHKVIYRQYAGLFFSLCVYRTDN--- 230
           +P  + EK K++ E+HRLV   D  ++  FVEFR HKV+YR+YAGLFF  CV   DN   
Sbjct: 21  VPYSDEEKIKLKGEIHRLVAPRDQKYQSNFVEFRNHKVVYRRYAGLFFCACVDTNDNELA 80

Query: 231 YLESVRLFVEILDHFFSH------------VYLILDEFILAGKLQETSKKAPQNLLE 272
           YLE++  FVE+LD FF +            VY ILDE  LAG+++ETSK+     LE
Sbjct: 81  YLEAIHFFVEVLDSFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLE 137

[Close]

BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot
Match: Q54H39 (AP-2 complex subunit sigma OS=Dictyostelium discoideum OX=44689 GN=ap2s1 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-18
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 172 PLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---YL 231
           P E+ EK K+  E+H++V + +  F  FVEFRTH+++YR+YAGLFFS+CV  TDN    L
Sbjct: 22  PYEDVEKRKLSHEIHKIVNSRETKFTNFVEFRTHRIVYRRYAGLFFSVCVDPTDNELFCL 81

Query: 232 ESVRLFVEILDHFFSH------------VYLILDEFILAGKLQETSK 264
           E++ LFVE+LD +F +            VY I+DE  LAG+L E SK
Sbjct: 82  EAIHLFVEVLDAYFGNVCELDLVFNFYKVYAIIDEVFLAGELMEPSK 128

[Close]

BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot
Match: Q4WS49 (AP-2 complex subunit sigma OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=aps2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.9e-17
Identity = 55/117 (47.01%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 172 PLEESEKHKVECEVHRLVVNSDPNFKI-FVEF-RTHKVIYRQYAGLFFSLCVYRTDN--- 231
           P  + EK K++ EVHRLV   D  ++  FVEF R+ K++YR+YAGLFF +CV  TDN   
Sbjct: 23  PYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCVCVDATDNELA 82

Query: 232 YLESVRLFVEILDHFFSH------------VYLILDEFILAGKLQETSKKAPQNLLE 272
           YLE++  FVE+LD FF +            VY ILDE  LAG+++ETSK+     LE
Sbjct: 83  YLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLE 139

[Close]

BLAST of Csor.00g082100 vs. NCBI nr
Match: KAG6591267.1 (AP-2 complex subunit sigma, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 882 bits (2280), Expect = 0.0
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 1   MIRFILLQNRQGKTRLAKYYVPLEESKKHKVEHKIHPWVVNRDPKFTNFVLSICRNSKLH 60
           MIRFILLQNRQGKTRLAKYYVPLEESKKHKVEHKIHPWVVNRDPKFTNFVLSICRNSKLH
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPLEESKKHKVEHKIHPWVVNRDPKFTNFVLSICRNSKLH 60

Query: 61  SIQLISLKWNGYCQTTPSSSPTYFSRLQLRPKFPLLCIATTSQNRLLICIHIHLNTNFKD 120
           SIQLISLKWNGYCQTTPSSSPTYFSRLQLRPKFPLLCIATTSQNRLLICIHIHLNTNFKD
Sbjct: 61  SIQLISLKWNGYCQTTPSSSPTYFSRLQLRPKFPLLCIATTSQNRLLICIHIHLNTNFKD 120

Query: 121 ISALCAPYSASDNQLDLDSSIPSSFSRMVWRLSHFGDLKGQDPSGEVLPSLPLEESEKHK 180
           ISALCAPYSASDNQLDLDSSIPSSFSRMVWRLSHFGDLKGQDPSGEVLPSLPLEESEKHK
Sbjct: 121 ISALCAPYSASDNQLDLDSSIPSSFSRMVWRLSHFGDLKGQDPSGEVLPSLPLEESEKHK 180

Query: 181 VECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDH 240
           VECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDH
Sbjct: 181 VECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDH 240

Query: 241 FFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTS 300
           FFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTS
Sbjct: 241 FFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTS 300

Query: 301 KTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSSSNEKWK 360
           KTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSSSNEKWK
Sbjct: 301 KTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSSSNEKWK 360

Query: 361 DGVVGLGCGVGKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDL 420
           DGVVGLGCGVGKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDL
Sbjct: 361 DGVVGLGCGVGKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDL 420

Query: 421 ISDLGTPMFNSNFRVPKLKDKTNLC 445
           ISDLGTPMFNSNFRVPKLKDKTNLC
Sbjct: 421 ISDLGTPMFNSNFRVPKLKDKTNLC 445

[Close]

BLAST of Csor.00g082100 vs. NCBI nr
Match: KAG7024150.1 (AP-2 complex subunit sigma, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460 bits (1183), Expect = 2.98e-159
Identity = 241/255 (94.51%), Postives = 242/255 (94.90%), Query Frame = 0


Query: 203 RTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDHFFSHV------------YLILD 262
           RTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDHFFSHV            YLILD
Sbjct: 1   RTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEILDHFFSHVCELVLVFNFSKVYLILD 60

Query: 263 EFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTSKTKLLAGIDL 322
           EFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTSKTKLLAGIDL
Sbjct: 61  EFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQVQSLIDMEMSLRTSKTKLLAGIDL 120

Query: 323 IRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSSSNEKWKDGVVGLGCGV 382
           IRQ KVSALETENVSRLKSKRSELEFRCQMAENLLGIL+KLKSSSNEKWKDGVVGLGCGV
Sbjct: 121 IRQPKVSALETENVSRLKSKRSELEFRCQMAENLLGILEKLKSSSNEKWKDGVVGLGCGV 180

Query: 383 GKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDLISDLGTPMFN 442
           GKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDLISDLGTPMFN
Sbjct: 181 GKIRTDSFKLKEEVSRLSLSIHSTSQQGNKKIGGGRQGNKKKELASISDLISDLGTPMFN 240

Query: 443 SNFRVPKLKDKTNLC 445
           SNFRVPKLKDKTNLC
Sbjct: 241 SNFRVPKLKDKTNLC 255

[Close]

BLAST of Csor.00g082100 vs. NCBI nr
Match: XP_022975655.1 (uncharacterized protein LOC111475461 [Cucurbita maxima])

HSP 1 Score: 313 bits (803), Expect = 2.45e-101
Identity = 165/192 (85.94%), Postives = 177/192 (92.19%), Query Frame = 0


Query: 178 KHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEI 237
           K+KVECEVHRLVVNSDPNF+  VEFRTHKVIYRQYAGLFFS+CV +TDNYLESVRLFVE+
Sbjct: 69  KYKVECEVHRLVVNSDPNFRNSVEFRTHKVIYRQYAGLFFSICVDKTDNYLESVRLFVEV 128

Query: 238 LDHFFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQV--QSLIDMEM 297
           LD FFS+VYLILDEFILAGKLQETSKKAPQN LEPSA DIRLYEDHV QV  +SLIDMEM
Sbjct: 129 LDQFFSNVYLILDEFILAGKLQETSKKAPQNQLEPSATDIRLYEDHVCQVKVESLIDMEM 188

Query: 298 SLRTSKTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSS- 357
            LRTSKTKLLAGIDLIR+LKVSALETEN S+LKSKRSELEFRCQM EN+LGIL+KLKSS 
Sbjct: 189 PLRTSKTKLLAGIDLIRRLKVSALETENESKLKSKRSELEFRCQMVENVLGILEKLKSSG 248

Query: 358 --SNEKWKDGVV 364
             SNEKWKDGV+
Sbjct: 249 NDSNEKWKDGVI 260

[Close]

BLAST of Csor.00g082100 vs. NCBI nr
Match: XP_022937104.1 (AP-2 complex subunit sigma isoform X1 [Cucurbita moschata])

HSP 1 Score: 254 bits (650), Expect = 2.37e-79
Identity = 143/183 (78.14%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN DP F  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  VPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHV------------YLILDEFILAGKLQETSKKAPQNLLEPSAA 290
           LE + LFVEILDHFFS+V            YLILDEFILAGKLQETSKKAPQN LEPSAA
Sbjct: 81  LECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGKLQETSKKAPQNQLEPSAA 140

Query: 291 DIRLYEDHVYQV--QSLIDMEMSLRTSKTKLLAGIDLIRQLKVSALETENVSRLKSKRSE 336
           DIRLYEDHVYQV  QSLIDMEMSLRTSKTKLLAGIDLIR+LKVSALE EN ++LKSKRS 
Sbjct: 141 DIRLYEDHVYQVKVQSLIDMEMSLRTSKTKLLAGIDLIRRLKVSALEIENENKLKSKRSS 200

[Close]

BLAST of Csor.00g082100 vs. NCBI nr
Match: XP_015969838.1 (AP-2 complex subunit sigma isoform X2 [Arachis duranensis] >XP_016204797.1 AP-2 complex subunit sigma isoform X2 [Arachis ipaensis] >XP_025604904.1 AP-2 complex subunit sigma isoform X2 [Arachis hypogaea] >XP_025659367.1 AP-2 complex subunit sigma isoform X2 [Arachis hypogaea])

HSP 1 Score: 153 bits (387), Expect = 3.44e-41
Identity = 79/98 (80.61%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLE+SEKHKVE EVHRLVVN DP +  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  VPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHVYLILDEFILAGKLQETSKKA 265
           LE + LFVEILDHFFS+VYLILDEFILAG+LQETSKKA
Sbjct: 81  LECIHLFVEILDHFFSNVYLILDEFILAGELQETSKKA 118

[Close]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL
Match: A0A6J1IHB5 (uncharacterized protein LOC111475461 OS=Cucurbita maxima OX=3661 GN=LOC111475461 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 1.18e-101
Identity = 165/192 (85.94%), Postives = 177/192 (92.19%), Query Frame = 0


Query: 178 KHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESVRLFVEI 237
           K+KVECEVHRLVVNSDPNF+  VEFRTHKVIYRQYAGLFFS+CV +TDNYLESVRLFVE+
Sbjct: 69  KYKVECEVHRLVVNSDPNFRNSVEFRTHKVIYRQYAGLFFSICVDKTDNYLESVRLFVEV 128

Query: 238 LDHFFSHVYLILDEFILAGKLQETSKKAPQNLLEPSAADIRLYEDHVYQV--QSLIDMEM 297
           LD FFS+VYLILDEFILAGKLQETSKKAPQN LEPSA DIRLYEDHV QV  +SLIDMEM
Sbjct: 129 LDQFFSNVYLILDEFILAGKLQETSKKAPQNQLEPSATDIRLYEDHVCQVKVESLIDMEM 188

Query: 298 SLRTSKTKLLAGIDLIRQLKVSALETENVSRLKSKRSELEFRCQMAENLLGILKKLKSS- 357
            LRTSKTKLLAGIDLIR+LKVSALETEN S+LKSKRSELEFRCQM EN+LGIL+KLKSS 
Sbjct: 189 PLRTSKTKLLAGIDLIRRLKVSALETENESKLKSKRSELEFRCQMVENVLGILEKLKSSG 248

Query: 358 --SNEKWKDGVV 364
             SNEKWKDGV+
Sbjct: 249 NDSNEKWKDGVI 260

[Close]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL
Match: A0A6J1FA77 (AP-2 complex subunit sigma isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443508 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.15e-79
Identity = 143/183 (78.14%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN DP F  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  VPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHV------------YLILDEFILAGKLQETSKKAPQNLLEPSAA 290
           LE + LFVEILDHFFS+V            YLILDEFILAGKLQETSKKAPQN LEPSAA
Sbjct: 81  LECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGKLQETSKKAPQNQLEPSAA 140

Query: 291 DIRLYEDHVYQV--QSLIDMEMSLRTSKTKLLAGIDLIRQLKVSALETENVSRLKSKRSE 336
           DIRLYEDHVYQV  QSLIDMEMSLRTSKTKLLAGIDLIR+LKVSALE EN ++LKSKRS 
Sbjct: 141 DIRLYEDHVYQVKVQSLIDMEMSLRTSKTKLLAGIDLIRRLKVSALEIENENKLKSKRSS 200

[Close]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL
Match: A0A6P4DRG5 (AP complex subunit sigma OS=Arachis duranensis OX=130453 GN=LOC107493253 PE=3 SV=1)

HSP 1 Score: 153 bits (387), Expect = 1.67e-41
Identity = 79/98 (80.61%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLE+SEKHKVE EVHRLVVN DP +  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  VPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHVYLILDEFILAGKLQETSKKA 265
           LE + LFVEILDHFFS+VYLILDEFILAG+LQETSKKA
Sbjct: 81  LECIHLFVEILDHFFSNVYLILDEFILAGELQETSKKA 118

[Close]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL
Match: A0A2G9GUJ9 (AP complex subunit sigma OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18483 PE=3 SV=1)

HSP 1 Score: 149 bits (376), Expect = 9.91e-40
Identity = 82/110 (74.55%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN DP F  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  IPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHV------------YLILDEFILAGKLQETSKKA 265
           LES+ LFVEILDHFFS+V            YLILDEFILAG+LQETSKKA
Sbjct: 81  LESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKA 130

[Close]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL
Match: A0A5A7P5K5 (AP complex subunit sigma OS=Striga asiatica OX=4170 GN=STAS_03483 PE=3 SV=1)

HSP 1 Score: 149 bits (376), Expect = 9.91e-40
Identity = 82/110 (74.55%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN DP F  FVEFRTHKVIYR+YAGLFFSLCV  TDN   Y
Sbjct: 21  IPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSHV------------YLILDEFILAGKLQETSKKA 265
           LES+ LFVEILDHFFS+V            YLILDEFILAG+LQETSKKA
Sbjct: 81  LESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKA 130

[Close]

BLAST of Csor.00g082100 vs. TAIR 10
Match: AT1G47830.1 (SNARE-like superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-34
Identity = 79/110 (71.82%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 171 LPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDN---Y 230
           +PLEESEKHKVE EVHRLVVN D  F  FVEFRTHKVIYR+YAGLFFS+CV  TDN   Y
Sbjct: 21  VPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYAGLFFSVCVDITDNELAY 80

Query: 231 LESVRLFVEILDHFFSH------------VYLILDEFILAGKLQETSKKA 266
           LES+ LFVEILDHFFS+            VYLILDEFILAG+LQETSK+A
Sbjct: 81  LESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRA 130

HSP 2 Score: 89.0 bits (219), Expect = 1.1e-17
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0


Query: 1  MIRFILLQNRQGKTRLAKYYVPLEESKKHKVEHKIHPWVVNRDPKFTNFV 51
          MIRFILLQNRQGKTRLAKYYVPLEES+KHKVE+++H  VVNRD KFTNFV
Sbjct: 1  MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFV 50

[Close]

BLAST of Csor.00g082100 vs. TAIR 10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 79.7 bits (195), Expect = 6.5e-15
Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 172 PLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESV 231
           P  + E+ KV  E+  +++N  P    FVE+R +KV+Y++YA L+F +C+ + DN LE +
Sbjct: 22  PYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVL 81

Query: 232 RL---FVEILDHFFSHV------------YLILDEFILAGKLQETSKKAPQNLLEPSAAD 291
            +   +VEILD +F  V            Y ILDE ++AG+LQE+SKK    ++      
Sbjct: 82  EIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQL 141

[Close]

BLAST of Csor.00g082100 vs. TAIR 10
Match: AT2G17380.1 (associated protein 19 )

HSP 1 Score: 79.3 bits (194), Expect = 8.4e-15
Identity = 43/135 (31.85%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 172 PLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESV 231
           P  + E+ KV  E+  +++N  P    F+E+R +KV+Y++YA L+F +C+   DN LE +
Sbjct: 22  PYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASLYFCMCIDEADNELEVL 81

Query: 232 RL---FVEILDHFFSHV------------YLILDEFILAGKLQETSKKAPQNLLEPSAAD 291
            +   +VEILD +F  V            Y ILDE ++AG+LQE+SKK    ++      
Sbjct: 82  EIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQL 141

[Close]

BLAST of Csor.00g082100 vs. TAIR 10
Match: AT4G35410.1 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-09
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 172 PLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFSLCVYRTDNYLESV 231
           P  + E+ KV  E+  +++N  P    FVE+R +KV+Y++YA L+F +C+ + DN LE +
Sbjct: 22  PYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVL 81

Query: 232 RL---FVEILDHFFSHV 246
            +   +VEILD +F  V
Sbjct: 82  EIIHHYVEILDRYFGSV 98

[Close]

BLAST of Csor.00g082100 vs. TAIR 10
Match: AT2G19790.1 (SNARE-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-06
Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 159 KGQDPSGEVLPSLPLEESEKHKVECEVHRLVVNSDPNFKIFVEFRTHKVIYRQYAGLFFS 218
           +GQ    +    L LE  E+  +E E+ R  +  +     FVE R +K++YR+YA LFF 
Sbjct: 12  QGQTRLAQYYEWLTLE--ERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRRYASLFFM 71

Query: 219 LCVYRTDN---YLESVRLFVEILDHFFSHV------------YLILDEFILAGKLQETSK 273
           + V   +N    LE + L VE +D  F +V            + +L+E ++ G + ETSK
Sbjct: 72  VGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETSK 131

The following BLAST results are available for this feature:

BLAST of Csor.00g082100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WL9	8.8e-33	71.82	AP-2 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=AP17 PE=2 SV=1	[more]
O50016	3.3e-32	69.37	AP-2 complex subunit sigma OS=Zea mays OX=4577 GN=AP-17 PE=2 SV=1	[more]
Q7SAQ1	7.2e-19	47.01	AP-2 complex subunit sigma OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A ...	[more]
Q54H39	1.6e-18	47.66	AP-2 complex subunit sigma OS=Dictyostelium discoideum OX=44689 GN=ap2s1 PE=3 SV...	[more]
Q4WS49	3.9e-17	47.01	AP-2 complex subunit sigma OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293...	[more]

BLAST of Csor.00g082100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591267.1	0.0	100.00	AP-2 complex subunit sigma, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024150.1	2.98e-159	94.51	AP-2 complex subunit sigma, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022975655.1	2.45e-101	85.94	uncharacterized protein LOC111475461 [Cucurbita maxima]	[more]
XP_022937104.1	2.37e-79	78.14	AP-2 complex subunit sigma isoform X1 [Cucurbita moschata]	[more]
XP_015969838.1	3.44e-41	80.61	AP-2 complex subunit sigma isoform X2 [Arachis duranensis] >XP_016204797.1 AP-2 ...	[more]

BLAST of Csor.00g082100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHB5	1.18e-101	85.94	uncharacterized protein LOC111475461 OS=Cucurbita maxima OX=3661 GN=LOC111475461...	[more]
A0A6J1FA77	1.15e-79	78.14	AP-2 complex subunit sigma isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6P4DRG5	1.67e-41	80.61	AP complex subunit sigma OS=Arachis duranensis OX=130453 GN=LOC107493253 PE=3 SV...	[more]
A0A2G9GUJ9	9.91e-40	74.55	AP complex subunit sigma OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18483 ...	[more]
A0A5A7P5K5	9.91e-40	74.55	AP complex subunit sigma OS=Striga asiatica OX=4170 GN=STAS_03483 PE=3 SV=1	[more]

BLAST of Csor.00g082100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47830.1	6.2e-34	71.82	SNARE-like superfamily protein	[more]
AT4G35410.2	6.5e-15	32.59	Clathrin adaptor complex small chain family protein	[more]
AT2G17380.1	8.4e-15	31.85	associated protein 19	[more]
AT4G35410.1	5.3e-09	38.96	Clathrin adaptor complex small chain family protein	[more]
AT2G19790.1	1.9e-06	31.78	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..120 e-value: 2.6E-12 score: 48.8
None	No IPR available	GENE3D	3.30.450.60		coord: 169..275 e-value: 1.3E-19 score: 72.4
None	No IPR available	PANTHER	PTHR11753:SF41	AP COMPLEX SUBUNIT SIGMA	coord: 2..51 coord: 171..265
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..51 e-value: 1.8E-10 score: 40.9 coord: 173..264 e-value: 1.8E-13 score: 50.6
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	coord: 2..51 coord: 171..265
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..51
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 176..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g082100.m01	Csor.00g082100.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0030122	AP-2 adaptor complex
molecular_function	GO:0035615	clathrin adaptor activity