Csor.00g081490 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g081490
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLocalized to the inner membrane of the chloroplast
LocationCsor_Chr09: 162831 .. 165489 (+)
RNA-Seq ExpressionCsor.00g081490
SyntenyCsor.00g081490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGTAATTCTTCTTACTCTCTAATTTCTTCCGCATTTGATCTTATCTCAGATTTTTGCTGTTGAATACTATTGGTTTTTCTTGTAATTTGTCTCTTGAATTACACCGAGCTTCAAATGGTGGCTACCTGCTACCCTTCACAATCTGCTTATCTCATAAATCGGCAGTGTTATATGTAGAAACCGCCTTGTTCCATGGGAAATTTGTGCGGGAACCGTGTATTTTCCCTATTGTTATGAAGCTTGCGGTTGGCTGTTTATCTTTTCTCGATTGCTGTCGAAATGCTCGGTTATTCTATTCGTTTCTGTTACGTGAACATGATGTCCTGATTTCCAAATCAATGAAAAATTTTCAACTCTTGGAAGATTGAATTTGACTAGTACATAGTTGCTCTCATTTTCATAATTTGGAAGAATTGGGGGGAGTATAAATGTATGGACACTTACATTTTATTAGTCTAAATTTGCTCGCAAATTATTTTTCCAGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCACCAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGGTACTTAAACAACATGCCATTAAGTCATATTTTATGATAGAATTATAGTCTCCGAAGTCTCTTTACATGGTAGGAATGCATGTCTAGAATCCTTGTACGGGCAGGCTTATCATTGGGGCGTGCAAATTCTGGAAAAAGAATTTCCGTACTAAACCAAATTGAAGGTGTTAATCTCAGGCAGTCAACAACCAAGAATCTTACCAGTTTCAAATGATTCAGTTCAACTGGTTCAAACAGATTTTCAAACCGAAGGATGGGCCTTTTTGGGTTTCCATGTGCAAAACTGAGTCTCATTAATTTAGTTTTGAATTGGTGAAAGAATGATTGAATCAACATATTGAATGCATGTACTCATTCTACTCTAGATATCAAATCAAATGGTCGTTGAATTTGATCTATAAACTCTGTATGATTCCGGCTTGGAGTTATGCCTCCCTATGAGAGTGTAGCATTTGTTCCTATTATATTTGGGCGCTAGTGTTTAGAGGCAAGGCCGACATTTTGTGGAATTGTGCTGTCCATGCTCTCCTTTTGTTAATTTGTAAGGAGGAAAACAATATGATTTTTAAATACAAGGAGACTGCCTCCATCTGGAAAATTTAGCTCAAATCCTTCGTTTCCTAGGTGAAAGAGGCCTCTTCTTTTCATGGATTCTTTTTGGAATAGTATACATATAGCTTCATCGTGGTGTTCCAACCACACGATTTTTTTATAATTACAGCATTTTGATGATTATTAATTATTGGAAGCCTCTAATGGTCCCTTAGGTTGTTGCTCTCTCGTTTAGTCTATAAAGCATCGTTTCTTATTCAAATAATAATAATAAATCTCTGTATGGTTGAAAATAATGTACAGTCCATAGCAATTGTTAGTATCTCTTATAGCATTTAGTATAAGTTGCAAATTGTCATGGCAGTTGAGATTATTGTGTACCTTATGACAGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGGTTTTTGACGTTTGCTCATCTCTTATCTAAGCTCTAAATTGTACATATGAGAAATTCATCTTGTATATCTGTTACTTGTGTGCTATGGATACTACATTATGTAAGATACATATTATAACAATCTACCAAGAAGTATGCACAACTGTTGTCTCTGGGCTTTCAGTTCGAAATCTTAGACTTTCAACTTTGCATGACTGAGAGTTGATCTTGTATTACAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTGCGAAATCACTCGTCTTTTTTTTTTGTTGCAAGTTATCTCCTGAATGTACATTTCGTCTTCACTTGACACTGATTTAGCGAAGGCATTGATTTTATTTTATTTATTGGCAACATCATATACCCATCTTAACCACCCTGAGTTGGAAGAGTGATAATCAAGGTCCGTGAAAAAGTAAGCCGGAAAAAAATGAGTTCAAGTTCAAATCATTGTAGCCACCTATATCGGATTTAAAATTCTACTAGTTTTTATTTACCATCAAACGTAGTAGGGTCGAGTGGTAGTCCTCTTATATGAGTTGAGGTACATGTAAGCCGGCGCGGACACACACATTTATCACAAAAAATGAATTTGTATGTTTTCTTTCCAAGCCTCGTCAAGTTCTTGTCAATGATGTTAAAATGTGCTTGTGTAGTTTTAGTTTTGAAAATTCTGCTGGGGGTATTTGCTCGTTGAACGTGTTTTTTTAAAATTGAAATTGCAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

mRNA sequence

ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCACCAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

Coding sequence (CDS)

ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCAGTTATCATCTGGATCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCTCCCACCAGCTTGTTACTCAATCCTGGTTGGGTTGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGTGATGGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

Protein sequence

MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Homology
[Close]
BLAST of Csor.00g081490 vs. NCBI nr
Match: KAG6591206.1 (hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024090.1 hypothetical protein SDJN02_12903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (850), Expect = 2.88e-114
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176

[Close]
BLAST of Csor.00g081490 vs. NCBI nr
Match: XP_022936063.1 (uncharacterized protein LOC111442778 [Cucurbita moschata])

HSP 1 Score: 310 bits (794), Expect = 8.06e-106
Identity = 169/176 (96.02%), Postives = 169/176 (96.02%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYS------DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of Csor.00g081490 vs. NCBI nr
Match: XP_023535792.1 (uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307 bits (786), Expect = 1.34e-104
Identity = 168/176 (95.45%), Postives = 168/176 (95.45%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLQLSS SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSRSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYS------DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of Csor.00g081490 vs. NCBI nr
Match: XP_022975295.1 (uncharacterized protein LOC111474436 [Cucurbita maxima])

HSP 1 Score: 305 bits (782), Expect = 5.44e-104
Identity = 167/176 (94.89%), Postives = 167/176 (94.89%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       D GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYS------DSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of Csor.00g081490 vs. NCBI nr
Match: XP_038900139.1 (uncharacterized protein LOC120087268 [Benincasa hispida])

HSP 1 Score: 287 bits (734), Expect = 1.13e-96
Identity = 155/176 (88.07%), Postives = 161/176 (91.48%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M AISNSLV TKNPQLQLS GSNLKTA+K LGSVSPTSLLL PGWVGK KLST RRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLSPGSNLKTANKHLGSVSPTSLLLGPGWVGKTKLSTFRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISKALAG DRK+LMRKL
Sbjct: 61  QAAYS------DGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAI 170

[Close]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 3.90e-106
Identity = 169/176 (96.02%), Postives = 169/176 (96.02%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYS------DGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 2.64e-104
Identity = 167/176 (94.89%), Postives = 167/176 (94.89%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       D GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYS------DSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 1.10e-96
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M+AISNSL+ TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISKALAGTDRK+LMRKL
Sbjct: 61  QAAYS------DGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.22e-96
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M+AISNSLV TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MSAISNSLVLTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISKALAGTDRK+LMRKL
Sbjct: 61  QAAYS------DGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 PKFIYDEEKAVEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 6.09e-94
Identity = 149/176 (84.66%), Postives = 160/176 (90.91%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M AISNSLV TKNPQLQL+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       DGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISKA+AG DRK+LMRKL
Sbjct: 61  QAAYS------DGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 170

[Close]
BLAST of Csor.00g081490 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40
Identity = 98/175 (56.00%), Postives = 125/175 (71.43%), Query Frame = 0 

Query: 1   MAAISNSLVS--TKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPL 60
           MA++S++ +S    + QL  SSG +L    + +      S  LN           ++R L
Sbjct: 1   MASLSSTSLSLPKNSHQLHPSSGFSLNPNARCVS----VSFGLNHSNKLHISAPRTKRIL 60

Query: 61  SVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMR 120
           ++Q+AY      RD   S + G+FVGGF+LGGLIVG LGCVYAPQISKA+AG DRK+LMR
Sbjct: 61  TIQSAY------RDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMR 120

Query: 121 KLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE 174
           KLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VSSQL+++D PNG A+++DEIE
Sbjct: 121 KLPKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIE 165

[Close]
BLAST of Csor.00g081490 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-14
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 0 

Query: 22  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGI 81
           + L T  KL      + L ++       K S   R  SV A Y      RDG RS ++G 
Sbjct: 24  NGLSTTTKLSSICKTSDLTIH-------KKSNRTRKFSVSAGY------RDGSRSGSSGD 83

Query: 82  FVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQK 141
           F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +K
Sbjct: 84  FIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GLEKTRETLNEK 143

Query: 142 IEQLNSAIDEVSSQLR 158
           I QLNSAID VSS+LR
Sbjct: 144 IGQLNSAIDNVSSRLR 145

[Close]
BLAST of Csor.00g081490 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12
Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 0 

Query: 22  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYRYNLRNRDGGRSSNAGI 81
           + L T  KL      + L ++       K S   R  SV A         DG RS ++G 
Sbjct: 24  NGLSTTTKLSSICKTSDLTIH-------KKSNRTRKFSVSAG--------DGSRSGSSGD 83

Query: 82  FVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQK 141
           F+ GF+LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +K
Sbjct: 84  FIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GLEKTRETLNEK 143

Query: 142 IEQLNSAIDEVSSQLR 158
           I QLNSAID VSS+LR
Sbjct: 144 IGQLNSAIDNVSSRLR 143

[Close]
BLAST of Csor.00g081490 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 52  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGT 111
           S     LSV A Y      R G +   +  FV GF+LG  + GTL  ++APQI +++   
Sbjct: 38  SNRSHKLSVSAGY------RGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSE 97

Query: 112 DRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR 158
           +     +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Sbjct: 98  NEYGFKKPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 135

[Close]
BLAST of Csor.00g081490 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 52  STSRRPLSVQAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGT 111
           S     LSV A Y      R G +   +  FV GF+LG  + GTL  ++APQI +++   
Sbjct: 37  SNRSHKLSVSAGY------RGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSE 96

Query: 112 DRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR 158
           +     +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Sbjct: 97  NEYGFKKPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 134

The following BLAST results are available for this feature:
BLAST of Csor.00g081490 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g081490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591206.12.88e-114100.00hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022936063.18.06e-10696.02uncharacterized protein LOC111442778 [Cucurbita moschata][more]
XP_023535792.11.34e-10495.45uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo][more]
XP_022975295.15.44e-10494.89uncharacterized protein LOC111474436 [Cucurbita maxima][more]
XP_038900139.11.13e-9688.07uncharacterized protein LOC120087268 [Benincasa hispida][more]
BLAST of Csor.00g081490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FC823.90e-10696.02uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427... [more]
A0A6J1IGB62.64e-10494.89uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436... [more]
A0A6J1FTW31.10e-9687.50uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467... [more]
A0A6J1IT362.22e-9687.50uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366... [more]
A0A1S3BV816.09e-9484.66uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=... [more]
BLAST of Csor.00g081490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G42960.11.3e-4056.00expressed protein localized to the inner membrane of the chloroplast. [more]
AT5G16660.14.8e-1438.24unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16660.22.6e-1236.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.15.0e-1138.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.25.0e-1138.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34048:SF9SUBFAMILY NOT NAMEDcoord: 1..176
NoneNo IPR availablePANTHERPTHR34048LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g081490.m01Csor.00g081490.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane