Csor.00g079230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g079230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	dof zinc finger protein 4-like
Location	Csor_Chr07: 4928057 .. 4928484 (+)
RNA-Seq Expression	Csor.00g079230
Synteny	Csor.00g079230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGGTAACCATTTCATTTCTTAATTTCTTCCCTTCAAAATTTTATTAATTTAAGACTATTTTGGTTTTCAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTACAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCCGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGTAATCATATCAACTCATGA

mRNA sequence

ATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTACAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCCGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGTAATCATATCAACTCATGA

Coding sequence (CDS)

ATGGCATTTCCATCCATCATCCCATCAAATTTTGAAGAACAGACGGTGTCGCCGCCGCCGGCGCTGCCACAAGGGCGGCCTGAGTCGATGACGGATCCGGCACGGTTGAAGTGCCCGAGATGTGAATCAAGAAACACCAAGTTTTGTTACTTCAACAACTACAGCCTGTCTCAACCCCGCCACTTCTGTAAGACCTGCCGCCGGTACTGGACCAGAGGCGGCGCTCTGAGAAGCGTCCCCGTAGGTGGTGGCTACCGCCGGAATAATAATAAAAGAACCAAAAGTGCGTCCAAATCTCCGGTTAACTCCCCATGCCAATCTTCTACTACTGCTGCAGCTGGTAATCATATCAACTCATGA

Protein sequence

MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGNHINS

Homology

[Close]

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot
Match: Q9M2U1 (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 4.3e-27
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.5e-27
Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 34  ARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRT 93
           A LKCPRCES NTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR  N+RT
Sbjct: 87  AALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR--NRRT 146

Query: 94  KSASKSPVNSPCQSSTTA-AAGN 116
           KS S +  NS   S+ T+ ++GN
Sbjct: 147 KSNSNNNNNSTATSNNTSFSSGN 167

[Close]

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot
Match: Q9LZ56 (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 68/110 (61.82%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 20  PALPQG--RPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 79
           P  P G  RP SM + AR          LKCPRC+S NTKFCYFNNYSL+QPRHFCK CR
Sbjct: 67  PGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACR 126

Query: 80  RYWTRGGALRSVPVGGGYRRNNNKRTKSA------SKSPVNSPCQSSTTA 112
           RYWTRGGALRSVPVGGG RR  NKRTK++      S S  NS  Q S T+
Sbjct: 127 RYWTRGGALRSVPVGGGCRR--NKRTKNSSGGGGGSTSSGNSKSQDSATS 174

[Close]

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 24  QGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGG 83
           Q +     +  +LKCPRC+S NTKFCY+NNY+LSQPRHFCK+CRRYWT+GGALR+VPVGG
Sbjct: 17  QQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGG 76

Query: 84  GYRRNNNKRTKSASKSPVNSPCQSSTTAAAGN 116
           G R+N  KR+ S+S S  +SP  SS      N
Sbjct: 77  GSRKNATKRSTSSSSS-ASSPSNSSQNKKTKN 107

[Close]

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 9.9e-24
Identity = 60/107 (56.07%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 16  VSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKT 75
           V+    LP     SM + AR          LKCPRC+S NTKFCY+NNY+L+QPRHFCK 
Sbjct: 47  VATSAGLPSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKG 106

Query: 76  CRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAA 113
           CRRYWT+GGALR+VPVGGG RRNN K      KS  +S  QSS+  A
Sbjct: 107 CRRYWTQGGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNA 153

[Close]

BLAST of Csor.00g079230 vs. NCBI nr
Match: KAG6595313.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244 bits (624), Expect = 1.17e-81
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60
           MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60

Query: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGNHINS 119
           HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGNHINS
Sbjct: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAGNHINS 119

[Close]

BLAST of Csor.00g079230 vs. NCBI nr
Match: XP_022963131.1 (dof zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 234 bits (598), Expect = 2.90e-76
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60
           MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60

Query: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG
Sbjct: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114

[Close]

BLAST of Csor.00g079230 vs. NCBI nr
Match: XP_022972784.1 (dof zinc finger protein DOF3.6-like [Cucurbita maxima])

HSP 1 Score: 224 bits (570), Expect = 5.82e-72
Identity = 112/116 (96.55%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPP--ALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60
           MAFPSIIPSNFEEQTVSPPP  ALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60

Query: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           PRHFCKTCRRYWTRGGALRSVPVGGGYRRN+NKRTKSASKSPVNSP QSSTTAAAG
Sbjct: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNSNKRTKSASKSPVNSPSQSSTTAAAG 116

[Close]

BLAST of Csor.00g079230 vs. NCBI nr
Match: KAG7027323.1 (Dof zinc finger protein DOF3.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206 bits (525), Expect = 2.43e-65
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 15  TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 74
           TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR+YWTRGG
Sbjct: 1   TVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRQYWTRGG 60

Query: 75  ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG
Sbjct: 61  ALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 100

[Close]

BLAST of Csor.00g079230 vs. NCBI nr
Match: XP_023517155.1 (dof zinc finger protein DOF2.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202 bits (515), Expect = 7.79e-64
Identity = 100/107 (93.46%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 67
           PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR
Sbjct: 4   PSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 63

Query: 68  RYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           RYWTRGGALRSVPVGGGYRRN       ASKSPVNSPCQSSTTAAAG
Sbjct: 64  RYWTRGGALRSVPVGGGYRRN-------ASKSPVNSPCQSSTTAAAG 103

[Close]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL
Match: A0A6J1HF83 (dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463431 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.40e-76
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60
           MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQPR 60

Query: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG
Sbjct: 61  HFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114

[Close]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL
Match: A0A6J1ICK3 (dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111471291 PE=4 SV=1)

HSP 1 Score: 224 bits (570), Expect = 2.82e-72
Identity = 112/116 (96.55%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MAFPSIIPSNFEEQTVSPPP--ALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60
           MAFPSIIPSNFEEQTVSPPP  ALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ
Sbjct: 1   MAFPSIIPSNFEEQTVSPPPPPALPQGRPESMTDPARLKCPRCESRNTKFCYFNNYSLSQ 60

Query: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           PRHFCKTCRRYWTRGGALRSVPVGGGYRRN+NKRTKSASKSPVNSP QSSTTAAAG
Sbjct: 61  PRHFCKTCRRYWTRGGALRSVPVGGGYRRNSNKRTKSASKSPVNSPSQSSTTAAAG 116

[Close]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL
Match: A0A6J1ILP5 (dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111478150 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.14e-47
Identity = 85/107 (79.44%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 14  QTVSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFC 73
           Q VSPP A PQ RPESM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFC
Sbjct: 32  QLVSPPRAPPQVRPESMVDRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFC 91

Query: 74  KTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTT 110
           KTCRRYWTRGGALRSVPVGGGYRRNN KRTKS SKSPVNS CQ +TT
Sbjct: 92  KTCRRYWTRGGALRSVPVGGGYRRNN-KRTKSTSKSPVNSQCQPTTT 137

[Close]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL
Match: A0A6J1GDF1 (dof zinc finger protein DOF3.6-like OS=Cucurbita moschata OX=3662 GN=LOC111453164 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.46e-46
Identity = 84/107 (78.50%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 14  QTVSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFC 73
           Q VSPP A PQ RP SM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFC
Sbjct: 32  QLVSPPRAPPQVRPGSMVDRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFC 91

Query: 74  KTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTT 110
           KTCRRYWTRGGALRSVPVGGGYRRNN KRTKS SKSPVNS CQ +TT
Sbjct: 92  KTCRRYWTRGGALRSVPVGGGYRRNN-KRTKSTSKSPVNSQCQPTTT 137

[Close]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL
Match: A0A0A0L265 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G295460 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 1.88e-43
Identity = 80/109 (73.39%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 16  VSPPPALPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKT 75
           ++P P   Q RP SM D AR          LKCPRCES NTKFCYFNNYSLSQPRHFCKT
Sbjct: 40  LAPSPPSSQVRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 99

Query: 76  CRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAAG 114
           CRRYWTRGGALRSVPVGGGYRRNN KRTKS+SKSPVNS CQ +TT  +G
Sbjct: 100 CRRYWTRGGALRSVPVGGGYRRNN-KRTKSSSKSPVNSQCQPTTTELSG 147

[Close]

BLAST of Csor.00g079230 vs. TAIR 10
Match: AT3G55370.1 (OBF-binding protein 3 )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of Csor.00g079230 vs. TAIR 10
Match: AT3G55370.2 (OBF-binding protein 3 )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 34  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 93

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 94  YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 151

[Close]

BLAST of Csor.00g079230 vs. TAIR 10
Match: AT3G55370.3 (OBF-binding protein 3 )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 8   PSNFEEQTVSPPPA----LPQGRPESMTDPAR----------LKCPRCESRNTKFCYFNN 67
           P+N+  Q  SPP +      Q R  SM + AR          L CPRC+S NTKFCYFNN
Sbjct: 79  PNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNN 138

Query: 68  YSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRTKSASKSPVNSPCQSSTTAAA 114
           YSL+QPRHFCKTCRRYWTRGG+LR+VPVGGG+RR  NKR+KS SKS V     ++T+ ++
Sbjct: 139 YSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRR--NKRSKSRSKSTVVVSTDNTTSTSS 196

[Close]

BLAST of Csor.00g079230 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 )

HSP 1 Score: 120.9 bits (302), Expect = 6.8e-28
Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 34  ARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNNKRT 93
           A LKCPRCES NTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR  N+RT
Sbjct: 87  AALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR--NRRT 146

Query: 94  KSASKSPVNSPCQSSTTA-AAGN 116
           KS S +  NS   S+ T+ ++GN
Sbjct: 147 KSNSNNNNNSTATSNNTSFSSGN 167

[Close]

BLAST of Csor.00g079230 vs. TAIR 10
Match: AT5G02460.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 68/110 (61.82%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 20  PALPQG--RPESMTDPAR----------LKCPRCESRNTKFCYFNNYSLSQPRHFCKTCR 79
           P  P G  RP SM + AR          LKCPRC+S NTKFCYFNNYSL+QPRHFCK CR
Sbjct: 67  PGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACR 126

Query: 80  RYWTRGGALRSVPVGGGYRRNNNKRTKSA------SKSPVNSPCQSSTTA 112
           RYWTRGGALRSVPVGGG RR  NKRTK++      S S  NS  Q S T+
Sbjct: 127 RYWTRGGALRSVPVGGGCRR--NKRTKNSSGGGGGSTSSGNSKSQDSATS 174

The following BLAST results are available for this feature:

BLAST of Csor.00g079230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2U1	4.3e-27	55.83	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV...	[more]
O80928	9.5e-27	73.49	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]
Q9LZ56	1.8e-25	61.82	Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV...	[more]
Q94AR6	1.2e-24	59.78	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
Q8L9V6	9.9e-24	56.07	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]

BLAST of Csor.00g079230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595313.1	1.17e-81	100.00	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022963131.1	2.90e-76	100.00	dof zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_022972784.1	5.82e-72	96.55	dof zinc finger protein DOF3.6-like [Cucurbita maxima]	[more]
KAG7027323.1	2.43e-65	99.00	Dof zinc finger protein DOF3.6, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023517155.1	7.79e-64	93.46	dof zinc finger protein DOF2.4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g079230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF83	1.40e-76	100.00	dof zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111463431 PE=...	[more]
A0A6J1ICK3	2.82e-72	96.55	dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111471291 ...	[more]
A0A6J1ILP5	1.14e-47	79.44	dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111478150 ...	[more]
A0A6J1GDF1	1.46e-46	78.50	dof zinc finger protein DOF3.6-like OS=Cucurbita moschata OX=3662 GN=LOC11145316...	[more]
A0A0A0L265	1.88e-43	73.39	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G295460 PE...	[more]

BLAST of Csor.00g079230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55370.1	3.0e-28	55.83	OBF-binding protein 3	[more]
AT3G55370.2	3.0e-28	55.83	OBF-binding protein 3	[more]
AT3G55370.3	3.0e-28	55.83	OBF-binding protein 3	[more]
AT2G37590.1	6.8e-28	73.49	DNA binding with one finger 2.4	[more]
AT5G02460.1	1.3e-26	61.82	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 36..90 e-value: 5.0E-31 score: 106.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 38..74
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 36..90 score: 28.583717
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR31992:SF227	DOF ZINC FINGER PROTEIN DOF2.4-LIKE	coord: 32..112
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 32..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g079230.m01	Csor.00g079230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding