Csor.00g079080 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g079080
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionDiaminopimelate epimerase
LocationCsor_Chr07: 4845889 .. 4849666 (+)
RNA-Seq ExpressionCsor.00g079080
SyntenyCsor.00g079080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTATCAACGACGAATGCTTTTCCCCCTTGCACATCCACTACAGCCACAACACTCCGGTTTGTCTGTTGCTTTGCTTCGGCTTTACAGCCAATGCCATGGCCGCCTCCATTTCTCTTCCACTTACCTCTCCATCTCCACGCTCTCTCGCCACAATTCCTTCTCTCCGATCGTCTTTTTGCTCCATTCTTCAACTGGATTCCATAGGAAAGAATTCTGCTCGGAGAAGAAGCCCAAGGCTCTCTGTATCCGTGACTTCCGCTGGCCTTCATGTTACAGAGAAAGCGTCGTCGTTGTCTTTTCTGGAACGGAGAGAGAGTGGCTTCCTTCACTTTGTTAAGTACCACGGTCTCGGCAATGACTTCATCTTGGTAATGATTCTCTGAGTTTCACTGTTAGACATGCTTTTTTTGTTTTTATCCTGAAATTAGCAGTAGATGCATGTTATTATCCATTTTATCTGTTGGAAATCGGAAATCGGAACTTGGTATCTGCCTCCAAGTGATGCTAATCATGGAAAACGATATGGAATTTTAATAAGAAACTAATTGGCAAATTTGTTCGATTGGAAATAGTTGAATTCACTCTCGGCTAATGAATCTGCATTTGGTTCTTAATCTGATATTGATTGGAAGTGAGCTTGAATAGGTTGATAATAGGGACTCCTCAAAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGGAACTTTGGGATCGGTGCTGACGGAGTTATTTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCGGAGGTAGCTGCGTTTTTCAGAAATAATTGTCTGTTACTGTTGTATTCCTATCAATTACGTCTGAGTCTGAGTTTTTTTCCCGCTTATATCATATAGATGTGTGGTAATGGAGTAAGATGCTTTGCCAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGGTATGGTTTTGCTATTGTTTTATCTTGCTGAATTACAACATTGGATTGTCCTTTCAAGACACGTTTCCGGCATTAATATTTCAAAGATGAACATTTGCCTTATATTCCTGATTCGGGGCTTTGAAACCTATTTTCTTTTGAAGTTGATATACAACTAATTAAATTATGATAGCTTAGATTTTATATTCATGTTTATGTACGTATTAGAATTTCTGATGGAGATCACAGTTTTCTGTTCATACTCTCGCAGTTTCACTGTTCATACTGGAGCTGGTCTTATTATTCCAGAACTTCAGGATGATGGACAGGTATAGTTTGATTATGTTCATTTCACTCGGGTATGTTAATCTGGCTTAAGAATAGTTTATTTAACTTGTTTGATGAAAAATGTTCTAATCTACAATCAACTTCTGTTTTAATTTAGAAGGTTAGGCGCATCTTCACCATTTTTTTCATTGCGAAATGCATCTGTGCTTTTACGATTCAGTGCTCTTTTTTTCTTTTTTGGCAAATGTGGTCTAAGTTTTTTTCGGTTCAGTGTCAATCTTAACGGCATGTAAATTCAGGTAAAAGTAGACATGGGTGAACCAATTCTTAAAGCATCAGATGTGCCTACTCGATTGGCACCAAATGCAGATGAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTAACATGGAGTGTGACCTGTGTCAGTATGGGAAACCCCCATTGCGTAACTTTTGGCAACAAAATTGACCAGGTATTTATATGGAAGTACATTTTGCGACATTCCATTCAATAGTCTAAAGTTTCTTGAAGTTTCCAAGGTGGATTACTATGACTTGCCCATTTTTTGTTTTTCTATTCTTTTACTTAAATGTAATCACCTAGCAAGTTATATCTCATGCACGTGGTGTATGTTGAAGATTGTTGGGAGATGAGTCTCATATCTGCTAATTAAGGGGTTGAGCATGAGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGGAAAAACCAAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGAAAATATCATACTATTGTGGAGATCTGTGGTTCCTAAAAGTGTAGTAGATTATATATGATAGGCTACACTCTAAGATTAAATTCATTAAGTAAGAATTTCTTTGAGTATTTTGCAGGATCCATGAGTACGTAAATTTCATTTATCATAATGTAGTTGATTGATTGAGACGTCTTCACATTGTAATGTTAACAGTTAGAGCGTTTATGAATCAAGGAATACAATTAAATGAAGAAGCAATACTAAGCCATGAGGAAAACTCTGGTGATGGCTAAGCTTCTTCGACATTTAAATCTTTTTCTTTCTTCCTTTGACCTAAAATTGCTTACAGCAGTTTAAACTATGTTCTGAGGGTAATGCAACTTTGTAGACTTGAGTATAGTCGTTTTGTTGGGTACAACTTTACCGTTCATTTACTATTTGGGCTTATTCTAGCATGGTCATGAACAGAATCTGCAGGTGGATGAAATAAATTTAGCTGCAATTGGTCCAAAGTTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGGTTGGGTTCTTGACAAGTTTGGATTTTCAGCTTTTTCTGGTTGAGATACAAGCAAATGTGTTTCTTTTTTTTCTAACCATTTAAACGGTCTTCCCTTCCCTTTCTATGCACTTTTATGTTCACTGAGATGCACTTTTTACACTGCTCATACTGCTTTTCTTCACGTCCACGACAGAATTTGTGCAAGTCTTCTCCAAATCACACCTTAAAATGCGCGTTTGGGAGCGTGGGGCAGGTTCGGATTCAACATAATTTAAGACAAATTAAAGTTGTAAGCATATAAATGGTGAATCTCACTTCATAACAAAACCTGCTGGCTATACTTCTCTGTGACACTACAGGTGCGACACTTGCTTGTGGAACTGGAGCCTGTGCAGTCGTTGTTGCAGCAGTTCTTGAGGGTCGTGCTGGGCGGGTAAGCAGACCATATTTAGTTTTCAAATACAACAGCGATAATATAATATAGTTTCATAAAAAAAAAAACCTCACATGTAATAGTCCAAACCCACCACTAGCAGATATTGTCATTTTTGGGTTTTCTCTTCCGACTTCCCCTCGAGGCTTTAAAACGCGTCTGCTAGAGAGAGGTTTCGACACCCTTATAAAGAGTGTTTTGTTCCCTCTCCAACCAATGTGGGATCTCACAATACATCTCCTTCGGGGCCCAGCGTCCTCGCTAACACTCGTTTCCCTCTCCAATCGATATGGGACCCTCCAATCCACCATCTTCGAGGCCCGGCATCCTCGCTGGCACACTGCCTGGTGTCCACCCCCCTTCAGGGTTCAGCCTCCTTGTTAGCACATCCCCTGGTGTCTGGCTCTGATACCATTTGTAATATCTCAAGCCCACCGCTAGTCAAATATTGTCTTTTTTGGGCTTTCCCTTTCAGGCTTCCCGTCAAGGCTCTAAAATGCCTTAGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATGTTTTGTTCCCCTCTCCAACCAACGTGGAATCTCACATCACAACTTGGTTATATAGATAGAAAAAAACAAAAGGTCATCAAATTTCAATCCTATCGTCCCTTTAAATTTCCTAACGTTGGATTCAAATATCTCGACGCAGAATTGCACCGTTGATCTACCTGGAGGACCATTACAGATAGAGTGGAATGAGCAAAACAACCACGTATACATGACTGGACCAGCGGAAGTAGCGTTCTATGGATCGGTTCCCCTACAGTAA

mRNA sequence

ATGGGAATTATCAACGACGAATGCTTTTCCCCCTTGCACATCCACTACAGCCACAACACTCCGGTTTGTCTGTTGCTTTGCTTCGGCTTTACAGCCAATGCCATGGCCGCCTCCATTTCTCTTCCACTTACCTCTCCATCTCCACGCTCTCTCGCCACAATTCCTTCTCTCCGATCGTCTTTTTGCTCCATTCTTCAACTGGATTCCATAGGAAAGAATTCTGCTCGGAGAAGAAGCCCAAGGCTCTCTGTATCCGTGACTTCCGCTGGCCTTCATGTTACAGAGAAAGCGTCGTCGTTGTCTTTTCTGGAACGGAGAGAGAGTGGCTTCCTTCACTTTGTTAAGTACCACGGTCTCGGCAATGACTTCATCTTGGTTGATAATAGGGACTCCTCAAAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGGAACTTTGGGATCGGTGCTGACGGAGTTATTTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCGGAGATGTGTGGTAATGGAGTAAGATGCTTTGCCAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGTTTCACTGTTCATACTGGAGCTGGTCTTATTATTCCAGAACTTCAGGATGATGGACAGGTAAAAGTAGACATGGGTGAACCAATTCTTAAAGCATCAGATGTGCCTACTCGATTGGCACCAAATGCAGATGAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTAACATGGAGTGTGACCTGTGTCAGTATGGGAAACCCCCATTGCGTAACTTTTGGCAACAAAATTGACCAGAATCTGCAGGTGGATGAAATAAATTTAGCTGCAATTGGTCCAAAGTTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGAATTTGTGCAAGTCTTCTCCAAATCACACCTTAAAATGCGCGTTTGGGAGCGTGGGGCAGGTGCGACACTTGCTTGTGGAACTGGAGCCTGTGCAGTCGTTGTTGCAGCAGTTCTTGAGGGTCGTGCTGGGCGGAATTGCACCGTTGATCTACCTGGAGGACCATTACAGATAGAGTGGAATGAGCAAAACAACCACGTATACATGACTGGACCAGCGGAAGTAGCGTTCTATGGATCGGTTCCCCTACAGTAA

Coding sequence (CDS)

ATGGGAATTATCAACGACGAATGCTTTTCCCCCTTGCACATCCACTACAGCCACAACACTCCGGTTTGTCTGTTGCTTTGCTTCGGCTTTACAGCCAATGCCATGGCCGCCTCCATTTCTCTTCCACTTACCTCTCCATCTCCACGCTCTCTCGCCACAATTCCTTCTCTCCGATCGTCTTTTTGCTCCATTCTTCAACTGGATTCCATAGGAAAGAATTCTGCTCGGAGAAGAAGCCCAAGGCTCTCTGTATCCGTGACTTCCGCTGGCCTTCATGTTACAGAGAAAGCGTCGTCGTTGTCTTTTCTGGAACGGAGAGAGAGTGGCTTCCTTCACTTTGTTAAGTACCACGGTCTCGGCAATGACTTCATCTTGGTTGATAATAGGGACTCCTCAAAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGGAACTTTGGGATCGGTGCTGACGGAGTTATTTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCGGAGATGTGTGGTAATGGAGTAAGATGCTTTGCCAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGTTTCACTGTTCATACTGGAGCTGGTCTTATTATTCCAGAACTTCAGGATGATGGACAGGTAAAAGTAGACATGGGTGAACCAATTCTTAAAGCATCAGATGTGCCTACTCGATTGGCACCAAATGCAGATGAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTAACATGGAGTGTGACCTGTGTCAGTATGGGAAACCCCCATTGCGTAACTTTTGGCAACAAAATTGACCAGAATCTGCAGGTGGATGAAATAAATTTAGCTGCAATTGGTCCAAAGTTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGAATTTGTGCAAGTCTTCTCCAAATCACACCTTAAAATGCGCGTTTGGGAGCGTGGGGCAGGTGCGACACTTGCTTGTGGAACTGGAGCCTGTGCAGTCGTTGTTGCAGCAGTTCTTGAGGGTCGTGCTGGGCGGAATTGCACCGTTGATCTACCTGGAGGACCATTACAGATAGAGTGGAATGAGCAAAACAACCACGTATACATGACTGGACCAGCGGAAGTAGCGTTCTATGGATCGGTTCCCCTACAGTAA

Protein sequence

MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ
Homology
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BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match: Q9LFG2 (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAPF PE=1 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.7e-149
Identity = 257/360 (71.39%), Postives = 297/360 (82.50%), Query Frame = 0 

Query: 37  ASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVT-E 96
           A++S    +P  R ++   S      S L      K     +SP L VS  ++   VT E
Sbjct: 4   AAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYC-FKSPSLRVSAAASMDAVTAE 63

Query: 97  KASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADG 156
           K S  SFL+++E+G LHFVKYHGLGNDFILVDNRDSS+P+IT EQA KLCDRNFG+GADG
Sbjct: 64  KFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG 123

Query: 157 VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLI 216
           VIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENLQG+HSFT+HTGAGLI
Sbjct: 124 VIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLI 183

Query: 217 IPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHC 276
           +PE+QDDGQVKVDMG PILKA DVPT+L+ N  E+VV++++ VDGV+W+VTCVSMGNPHC
Sbjct: 184 VPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHC 243

Query: 277 VTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGAT 336
           +TFG K   NL+VD++NL  IGPKFEHHEMFPARTNTEFV+V S+SHLKMRVWERGAGAT
Sbjct: 244 ITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGAT 303

Query: 337 LACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPL 396
           LACGTGACA+VVAAVLEGRA R CTVDLPGGPL+IEW +++NH+YMTGPAE  FYGS  L
Sbjct: 304 LACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362

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BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match: Q2QNF7 (Diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DAPF PE=2 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 7.3e-140
Identity = 238/351 (67.81%), Postives = 279/351 (79.49%), Query Frame = 0 

Query: 43  LTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSF 102
           ++S +  + ATI +  +   +        +    R +P     V +  +     A++ +F
Sbjct: 1   MSSATAAATATIAAAAAKLAATPAPAPSRRRLTLRGNPTARRCVAAMAVSTPRSAAAAAF 60

Query: 103 LERRES-GFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMP 162
           LERRES   LHFVKY GLGNDFI+VDNRDS+ P++TPE+A KLCDRNFG+GADGVIF MP
Sbjct: 61  LERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMP 120

Query: 163 GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQD 222
           GVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG HSF +HTGAGLIIPE+Q+
Sbjct: 121 GVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQN 180

Query: 223 DGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNK 282
           DG+VKVDMG+PIL   D+PT+L    +E+VV++D+ VDG TW VTCVSMGNPHCVTFG K
Sbjct: 181 DGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTK 240

Query: 283 IDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTG 342
             + L VD++ L+ IGPKFEHHEMFPARTNTEFV+V S+SHLKMRVWERGAGATLACGTG
Sbjct: 241 ELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG 300

Query: 343 ACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGS 393
           ACAVVVAAVLEGRA R C VDLPGGPL+IEW E +NH+YMTGPAE  FYGS
Sbjct: 301 ACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGS 351

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BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match: A2ZLS4 (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=DAPF PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.6e-139
Identity = 238/354 (67.23%), Postives = 282/354 (79.66%), Query Frame = 0 

Query: 43  LTSPSPRSLATIPSLRSSFCSILQLDSIGKNSAR---RRSPRLSVSVTSAGLHVTEKASS 102
           ++S +  + ATI +  ++   +    +   +  R   R +P     V +  +     A++
Sbjct: 1   MSSATAAATATIAAAAAAAAKLAATPAPAPSRRRLTLRGNPTARRCVAAMAVSTPRSAAA 60

Query: 103 LSFLERRES-GFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIF 162
            +FLERRES   LHFVKY GLGNDFI++DNRDS+ P++TPE+A KLCDRNFG+GADGVIF
Sbjct: 61  AAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIF 120

Query: 163 AMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPE 222
            MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG HSF +HTGAGLIIPE
Sbjct: 121 VMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPE 180

Query: 223 LQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTF 282
           +Q+DG+VKVDMG+PIL   D+PT+L    +E+VV++D+ VDG TW VTCVSMGNPHCVTF
Sbjct: 181 IQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTF 240

Query: 283 GNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLAC 342
           G K  + L VD++ L+ IGPKFEHHEMFPARTNTEFV+V S+SHLKMRVWERGAGATLAC
Sbjct: 241 GTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLAC 300

Query: 343 GTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGS 393
           GTGACAVVVAAVLEGRA R C VDLPGGPL+IEW E +NH+YMTGPAE  FYGS
Sbjct: 301 GTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGS 354

[Close]
BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match: Q116P1 (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=dapF PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-106
Identity = 187/281 (66.55%), Postives = 219/281 (77.94%), Query Frame = 0 

Query: 113 FVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRI 172
           F KYHGLGNDFIL+DNR   +P +TPEQA++LCDRNFGIGADGVIFA+PGV  TDYTMRI
Sbjct: 5   FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRI 64

Query: 173 FNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEP 232
           FNSDGSEPEMCGNG+RC A+FIAELEN   +  + +HTGAG+I+PELQ DGQV VDMG+P
Sbjct: 65  FNSDGSEPEMCGNGIRCLAKFIAELEN-NNKTKYNIHTGAGIIVPELQGDGQVTVDMGQP 124

Query: 233 ILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVDEIN 292
            L AS++PT LA NAD+ VV   +EV G +W VTCVSMGNPHC+TF         V  I+
Sbjct: 125 RLLASEIPTTLA-NADDKVVDQLLEVGGKSWFVTCVSMGNPHCITFVE------DVTAID 184

Query: 293 LAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLE 352
           LA IGPKFEH+ +FP RTNTEF+QV S  ++KMRVWERGAGATLACGTGACA VVA VL 
Sbjct: 185 LAKIGPKFEHNPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLT 244

Query: 353 GRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 394
               R  TV+LPGG L+IEW+  +  +YMTGPAE  F G +
Sbjct: 245 QNNERLVTVELPGGCLEIEWSTIDQKIYMTGPAEKVFTGII 277

[Close]
BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match: Q8YVD0 (Diaminopimelate epimerase 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=dapF1 PE=3 SV=2)

HSP 1 Score: 386.3 bits (991), Expect = 4.0e-106
Identity = 183/284 (64.44%), Postives = 219/284 (77.11%), Query Frame = 0 

Query: 111 LHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTM 170
           + F KYHGLGNDFIL+DNR S  P ITPE+AV++CDR+FGIGADGVIFA+PG NGTDYTM
Sbjct: 3   IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTM 62

Query: 171 RIFNSDGSEPEMCGNGVRCFARFIAELENL-QGRHSFTVHTGAGLIIPELQDDGQVKVDM 230
           RIFNSDGSEPEMCGNG+RC A F+A+LE L + + ++ +HT AG+I P+L  DGQ+KVDM
Sbjct: 63  RIFNSDGSEPEMCGNGIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQLTPDGQIKVDM 122

Query: 231 GEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVD 290
           G P L A ++PT L   AD  V+   +EV+G TW VTCVSMGNPHC+TF         V 
Sbjct: 123 GLPRLLAGEIPTTLGA-ADGKVINQPLEVEGQTWEVTCVSMGNPHCITFVE------DVA 182

Query: 291 EINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAA 350
            I L  IGPKFEHH  FP RTNTEF+QV S+ +LKMRVWERGAG TLACGTGACA +VAA
Sbjct: 183 AIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACASLVAA 242

Query: 351 VLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 394
           VL GR+ R  TV+LPGGPL+IEW+E +  +YMTGPA+  F G +
Sbjct: 243 VLTGRSDRLATVELPGGPLEIEWSEVDQRIYMTGPADRVFTGKL 279

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BLAST of Csor.00g079080 vs. NCBI nr
Match: KAG6595298.1 (Diaminopimelate epimerase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 801 bits (2070), Expect = 7.29e-293
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 1   MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS 60
           MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS
Sbjct: 1   MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS 60

Query: 61  FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG 120
           FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG
Sbjct: 61  FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG 120

Query: 121 NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP 180
           NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP
Sbjct: 121 NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP 180

Query: 181 EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP 240
           EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP
Sbjct: 181 EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP 240

Query: 241 TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVDEINLAAIGPKF 300
           TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVDEINLAAIGPKF
Sbjct: 241 TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQNLQVDEINLAAIGPKF 300

Query: 301 EHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCT 360
           EHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCT
Sbjct: 301 EHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCT 360

Query: 361 VDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ 396
           VDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ
Sbjct: 361 VDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ 396

[Close]
BLAST of Csor.00g079080 vs. NCBI nr
Match: KAG7027308.1 (Diaminopimelate epimerase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 766 bits (1977), Expect = 8.39e-279
Identity = 384/401 (95.76%), Postives = 384/401 (95.76%), Query Frame = 0 

Query: 1   MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS 60
           MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS
Sbjct: 1   MGIINDECFSPLHIHYSHNTPVCLLLCFGFTANAMAASISLPLTSPSPRSLATIPSLRSS 60

Query: 61  FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG 120
           FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG
Sbjct: 61  FCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVTEKASSLSFLERRESGFLHFVKYHGLG 120

Query: 121 NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP 180
           NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP
Sbjct: 121 NDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEP 180

Query: 181 EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP 240
           EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP
Sbjct: 181 EMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKASDVP 240

Query: 241 TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQ-----NLQVDEINLAA 300
           TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQ     NLQVDEINLAA
Sbjct: 241 TRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIDQHGHEQNLQVDEINLAA 300

Query: 301 IGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRA 360
           IGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAV          
Sbjct: 301 IGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGATLACGTGACAV---------- 360

Query: 361 GRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ 396
             NCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ
Sbjct: 361 --NCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPLQ 389

[Close]
BLAST of Csor.00g079080 vs. NCBI nr
Match: XP_022962797.1 (diaminopimelate epimerase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 723 bits (1865), Expect = 3.84e-262
Identity = 360/363 (99.17%), Postives = 362/363 (99.72%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           AM ASISLPLTSPSPRSLA+IPSLRSSFCS+LQLDSIGKNSARRRSPRLSVSVTSAGLHV
Sbjct: 2   AMPASISLPLTSPSPRSLASIPSLRSSFCSLLQLDSIGKNSARRRSPRLSVSVTSAGLHV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA
Sbjct: 62  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. NCBI nr
Match: XP_023518055.1 (diaminopimelate epimerase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719 bits (1855), Expect = 1.28e-260
Identity = 358/363 (98.62%), Postives = 361/363 (99.45%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           AMAASISLPLTSPSPRSLA+IPSLRSSFCS LQLDSIGKNSARRRSPRLSVSV SAGLHV
Sbjct: 2   AMAASISLPLTSPSPRSLASIPSLRSSFCSTLQLDSIGKNSARRRSPRLSVSVASAGLHV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSS+PRITPEQAVKLCDRNFGIGA
Sbjct: 62  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKIDQNLQVD+INLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIDQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. NCBI nr
Match: XP_022972739.1 (diaminopimelate epimerase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 713 bits (1841), Expect = 1.75e-258
Identity = 356/363 (98.07%), Postives = 358/363 (98.62%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           AMAASISLP TSPSPRSLA+IPS RSSFCS LQLDSIGKNSARRRSPRLSVSVTSAGLH 
Sbjct: 2   AMAASISLPRTSPSPRSLASIPSFRSSFCSTLQLDSIGKNSARRRSPRLSVSVTSAGLHF 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSS+PRITPEQAVKLCDRNFGIGA
Sbjct: 62  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQI WNEQNNHVYMTGPAEVAFYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIGWNEQNNHVYMTGPAEVAFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match: A0A6J1HDJ7 (Diaminopimelate epimerase OS=Cucurbita moschata OX=3662 GN=LOC111463180 PE=3 SV=1)

HSP 1 Score: 723 bits (1865), Expect = 1.86e-262
Identity = 360/363 (99.17%), Postives = 362/363 (99.72%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           AM ASISLPLTSPSPRSLA+IPSLRSSFCS+LQLDSIGKNSARRRSPRLSVSVTSAGLHV
Sbjct: 2   AMPASISLPLTSPSPRSLASIPSLRSSFCSLLQLDSIGKNSARRRSPRLSVSVTSAGLHV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA
Sbjct: 62  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match: A0A6J1ICF6 (Diaminopimelate epimerase OS=Cucurbita maxima OX=3661 GN=LOC111471255 PE=3 SV=1)

HSP 1 Score: 713 bits (1841), Expect = 8.45e-259
Identity = 356/363 (98.07%), Postives = 358/363 (98.62%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           AMAASISLP TSPSPRSLA+IPS RSSFCS LQLDSIGKNSARRRSPRLSVSVTSAGLH 
Sbjct: 2   AMAASISLPRTSPSPRSLASIPSFRSSFCSTLQLDSIGKNSARRRSPRLSVSVTSAGLHF 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSS+PRITPEQAVKLCDRNFGIGA
Sbjct: 62  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQI WNEQNNHVYMTGPAEVAFYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIGWNEQNNHVYMTGPAEVAFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match: A0A6J1CS73 (Diaminopimelate epimerase OS=Momordica charantia OX=3673 GN=LOC111013709 PE=3 SV=1)

HSP 1 Score: 664 bits (1714), Expect = 1.90e-239
Identity = 329/363 (90.63%), Postives = 348/363 (95.87%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           A+AA+ISLPLTSPS RSLA+IPSLRSSF S +QLD +G N ARRRSPRLSVS +SAGL V
Sbjct: 2   AIAATISLPLTSPSRRSLASIPSLRSSFSSRVQLDFLGNNPARRRSPRLSVSASSAGLEV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEK+SSLSFL+RRESG LHFVKYHGLGNDFILVDNRDSS+PR+TPEQAVKLCDRNFGIGA
Sbjct: 62  TEKSSSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRVTPEQAVKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKAS VPTRLAPN D++VVKSDIEVD VTWSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKASGVPTRLAPNTDQAVVKSDIEVDEVTWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNK +Q+LQVD+INLAAIGPKFEHHEMFPARTNTEFVQV S+SHLKMRVWERGAG
Sbjct: 242 HCVTFGNKTEQSLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVVSRSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGR+CTVDLPGGPLQIEW+EQ+NHVYMTGPAEV FYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRSCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSV 361

Query: 394 PLQ 396
           PLQ
Sbjct: 362 PLQ 364

[Close]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match: A0A5A7TV60 (Diaminopimelate epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001640 PE=3 SV=1)

HSP 1 Score: 654 bits (1687), Expect = 2.46e-235
Identity = 325/362 (89.78%), Postives = 340/362 (93.92%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           A+A +ISLPLTSPS RSLA+IPSLR SF S LQLDS+ K  ARRRSPRLSVS +SAGL V
Sbjct: 2   AIATTISLPLTSPSSRSLASIPSLRLSFTSTLQLDSLPKYFARRRSPRLSVSASSAGLEV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKA SLSFL+ RESG LHFVKYHGLGNDFILVDNRDSS+PRITPEQA KLCDRNFGIGA
Sbjct: 62  TEKAPSLSFLDHRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKA+DVPTRL P  D+SVVK+ IEVDGV WSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKI+QNLQV++INLAAIGPKFEHHEMFPARTNTEFVQV S SHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIEQNLQVEDINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEW+EQ+NHVYMTGPAEV FYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSV 361

Query: 394 PL 395
           PL
Sbjct: 362 PL 363

[Close]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match: A0A1S3BHL3 (Diaminopimelate epimerase OS=Cucumis melo OX=3656 GN=LOC103489934 PE=3 SV=1)

HSP 1 Score: 654 bits (1687), Expect = 2.46e-235
Identity = 325/362 (89.78%), Postives = 340/362 (93.92%), Query Frame = 0 

Query: 34  AMAASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHV 93
           A+A +ISLPLTSPS RSLA+IPSLR SF S LQLDS+ K  ARRRSPRLSVS +SAGL V
Sbjct: 2   AIATTISLPLTSPSSRSLASIPSLRLSFTSTLQLDSLPKYFARRRSPRLSVSASSAGLEV 61

Query: 94  TEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGA 153
           TEKA SLSFL+ RESG LHFVKYHGLGNDFILVDNRDSS+PRITPEQA KLCDRNFGIGA
Sbjct: 62  TEKAPSLSFLDHRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIGA 121

Query: 154 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 213
           DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG
Sbjct: 122 DGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAG 181

Query: 214 LIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNP 273
           LIIPELQDDGQVKVDMGEPILKA+DVPTRL P  D+SVVK+ IEVDGV WSVTCVSMGNP
Sbjct: 182 LIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGNP 241

Query: 274 HCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAG 333
           HCVTFGNKI+QNLQV++INLAAIGPKFEHHEMFPARTNTEFVQV S SHLKMRVWERGAG
Sbjct: 242 HCVTFGNKIEQNLQVEDINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAG 301

Query: 334 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSV 393
           ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEW+EQ+NHVYMTGPAEV FYGSV
Sbjct: 302 ATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSV 361

Query: 394 PL 395
           PL
Sbjct: 362 PL 363

[Close]
BLAST of Csor.00g079080 vs. TAIR 10
Match: AT3G53580.1 (diaminopimelate epimerase family protein )

HSP 1 Score: 530.4 bits (1365), Expect = 1.2e-150
Identity = 257/360 (71.39%), Postives = 297/360 (82.50%), Query Frame = 0 

Query: 37  ASISLPLTSPSPRSLATIPSLRSSFCSILQLDSIGKNSARRRSPRLSVSVTSAGLHVT-E 96
           A++S    +P  R ++   S      S L      K     +SP L VS  ++   VT E
Sbjct: 4   AAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYC-FKSPSLRVSAAASMDAVTAE 63

Query: 97  KASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIGADG 156
           K S  SFL+++E+G LHFVKYHGLGNDFILVDNRDSS+P+IT EQA KLCDRNFG+GADG
Sbjct: 64  KFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG 123

Query: 157 VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGAGLI 216
           VIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENLQG+HSFT+HTGAGLI
Sbjct: 124 VIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLI 183

Query: 217 IPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGNPHC 276
           +PE+QDDGQVKVDMG PILKA DVPT+L+ N  E+VV++++ VDGV+W+VTCVSMGNPHC
Sbjct: 184 VPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHC 243

Query: 277 VTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGAGAT 336
           +TFG K   NL+VD++NL  IGPKFEHHEMFPARTNTEFV+V S+SHLKMRVWERGAGAT
Sbjct: 244 ITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGAT 303

Query: 337 LACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGSVPL 396
           LACGTGACA+VVAAVLEGRA R CTVDLPGGPL+IEW +++NH+YMTGPAE  FYGS  L
Sbjct: 304 LACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362

The following BLAST results are available for this feature:
BLAST of Csor.00g079080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LFG21.7e-14971.39Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAPF... [more]
Q2QNF77.3e-14067.81Diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=3994... [more]
A2ZLS41.6e-13967.23Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica ... [more]
Q116P11.8e-10666.55Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 ... [more]
Q8YVD04.0e-10664.44Diaminopimelate epimerase 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 25... [more]
BLAST of Csor.00g079080 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595298.17.29e-293100.00Diaminopimelate epimerase, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
KAG7027308.18.39e-27995.76Diaminopimelate epimerase, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
XP_022962797.13.84e-26299.17diaminopimelate epimerase, chloroplastic-like [Cucurbita moschata][more]
XP_023518055.11.28e-26098.62diaminopimelate epimerase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. ... [more]
XP_022972739.11.75e-25898.07diaminopimelate epimerase, chloroplastic-like [Cucurbita maxima][more]
BLAST of Csor.00g079080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HDJ71.86e-26299.17Diaminopimelate epimerase OS=Cucurbita moschata OX=3662 GN=LOC111463180 PE=3 SV=... [more]
A0A6J1ICF68.45e-25998.07Diaminopimelate epimerase OS=Cucurbita maxima OX=3661 GN=LOC111471255 PE=3 SV=1[more]
A0A6J1CS731.90e-23990.63Diaminopimelate epimerase OS=Momordica charantia OX=3673 GN=LOC111013709 PE=3 SV... [more]
A0A5A7TV602.46e-23589.78Diaminopimelate epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BHL32.46e-23589.78Diaminopimelate epimerase OS=Cucumis melo OX=3656 GN=LOC103489934 PE=3 SV=1[more]
BLAST of Csor.00g079080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53580.11.2e-15071.39diaminopimelate epimerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 90..234
e-value: 4.3E-45
score: 155.1
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 235..385
e-value: 1.9E-59
score: 202.0
NoneNo IPR availablePANTHERPTHR31689:SF0DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 78..394
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 111..240
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 254..392
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 267..386
e-value: 1.2E-30
score: 106.2
coord: 113..233
e-value: 9.4E-35
score: 119.4
IPR001653Diaminopimelate epimerase, DapFTIGRFAMTIGR00652TIGR00652coord: 112..392
e-value: 4.5E-94
score: 312.8
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 78..394
IPR001653Diaminopimelate epimerase, DapFHAMAPMF_00197DAP_epimerasecoord: 111..395
score: 38.001266
IPR018510Diaminopimelate epimerase, active sitePROSITEPS01326DAP_EPIMERASEcoord: 174..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g079080.m01Csor.00g079080.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
cellular_component GO:0005829 cytosol
cellular_component GO:0005737 cytoplasm
molecular_function GO:0008837 diaminopimelate epimerase activity