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Csor.00g079070 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGACCCCTCAGCTTCATACATCCACATGGTAATCTTTTTTTATTTTTATTTATTTTTTTCTCAATTATTTCATTAAATTTGTGATGAGGGTCTATGATTGTTACGGTGTAGGTGCACCACCTGATCGAAATAAGCATTCTTTTCAACATGTCCAAGGAAGAGTGCATGGAAGCTCTCTCCAAACATGCAAATATCGAACCGGTCATCACTTCCACCGGTTCGTTCACGTGACATGCACGGACTTCAACTCTTTTAATTTTTAATTTTTTGTAAAATGTTGTGCAGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATGAGAAGAAACGACGTGACGTTACAACGAGGAAGTTGGAAGGGAACTCTTCGTCCGACACGTCGGGTTTCAACTTGCTGGGTTTGGGCGATACGACGCCGTTGGGTCGCTAG ATGGAAGACGACCCCTCAGCTTCATACATCCACATGGTGCACCACCTGATCGAAATAAGCATTCTTTTCAACATGTCCAAGGAAGAGTGCATGGAAGCTCTCTCCAAACATGCAAATATCGAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATGAGAAGAAACGACGTGACGTTACAACGAGGAAGTTGGAAGGGAACTCTTCGTCCGACACGTCGGGTTTCAACTTGCTGGGTTTGGGCGATACGACGCCGTTGGGTCGCTAG ATGGAAGACGACCCCTCAGCTTCATACATCCACATGGTGCACCACCTGATCGAAATAAGCATTCTTTTCAACATGTCCAAGGAAGAGTGCATGGAAGCTCTCTCCAAACATGCAAATATCGAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATGAGAAGAAACGACGTGACGTTACAACGAGGAAGTTGGAAGGGAACTCTTCGTCCGACACGTCGGGTTTCAACTTGCTGGGTTTGGGCGATACGACGCCGTTGGGTCGCTAG MEDDPSASYIHMVHHLIEISILFNMSKEECMEALSKHANIEPVITSTVWNELEKENKEFFEAYEKKRRDVTTRKLEGNSSSDTSGFNLLGLGDTTPLGR Homology
BLAST of Csor.00g079070 vs. NCBI nr
Match: KAG6595297.1 (hypothetical protein SDJN03_11850, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198 bits (504), Expect = 5.45e-64 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Csor.00g079070 vs. NCBI nr
Match: XP_022962802.1 (uncharacterized protein LOC111463185 [Cucurbita moschata]) HSP 1 Score: 196 bits (497), Expect = 6.37e-63 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
BLAST of Csor.00g079070 vs. NCBI nr
Match: XP_023518507.1 (uncharacterized protein LOC111781985 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194 bits (494), Expect = 1.83e-62 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
BLAST of Csor.00g079070 vs. NCBI nr
Match: XP_022972743.1 (uncharacterized protein LOC111471258 [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 1.54e-60 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0
BLAST of Csor.00g079070 vs. NCBI nr
Match: XP_023544368.1 (uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 hypothetical protein SDJN02_03581 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159 bits (401), Expect = 2.64e-48 Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Csor.00g079070 vs. ExPASy TrEMBL
Match: A0A6J1HDK1 (uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC111463185 PE=4 SV=1) HSP 1 Score: 196 bits (497), Expect = 3.08e-63 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
BLAST of Csor.00g079070 vs. ExPASy TrEMBL
Match: A0A6J1IAZ7 (uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 7.48e-61 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0
BLAST of Csor.00g079070 vs. ExPASy TrEMBL
Match: A0A6J1IHY2 (uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620 PE=4 SV=1) HSP 1 Score: 158 bits (400), Expect = 1.82e-48 Identity = 81/95 (85.26%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Csor.00g079070 vs. ExPASy TrEMBL
Match: A0A0A0KZG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1) HSP 1 Score: 153 bits (387), Expect = 1.74e-46 Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of Csor.00g079070 vs. ExPASy TrEMBL
Match: A0A6J1GEA1 (uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC111453395 PE=4 SV=1) HSP 1 Score: 135 bits (339), Expect = 2.61e-39 Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of Csor.00g079070 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24 Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of Csor.00g079070 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Csor.00g079070 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Csor.00g079070 vs. TAIR 10
Match: AT5G02580.2 (Plant protein 1589 of unknown function ) HSP 1 Score: 71.2 bits (173), Expect = 5.1e-13 Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of Csor.00g079070 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function ) HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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