Csor.00g078960 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGCAGTGGCTCTAACTCCATTGGCCTGCTCATGGCCAATGCAAACAGCTACGACTACCCCGGTCGGAGTCCCTCTCCATTTTGGACTGGTTTTACAGGCCAACACCAGTTTTCTGATGGAGACCCAATTGAAGATGATCCCGAGGGTGATCGGACTAACCTCAGTTGTTTCGAGAATTCGCAGAATGAACTCGACTCCTCGGATCTCATCTTCAATGGCCAAGACCCTTATGACAATCAAAGTGGCTGCACAATGGAGAATAGAGAACTCATTCTCTTCCACAATGAGGATCAAACTGAGGATTATACTGGTGATCCTAGAAACCTATACTATGAATTTGATTGGGCTTGTTTTCGATATTGGTTTGGACTTGGAGAAGATGAACAAGACTGGAATGGGCAAGAATTGAGACTAGAACAAGACTGCAGTTCTGAGGCTGTGGCCCTCCTAGAATCCATCCTGGGGTATTGGTCATGA ATGAATTGCAGTGGCTCTAACTCCATTGGCCTGCTCATGGCCAATGCAAACAGCTACGACTACCCCGGTCGGAGTCCCTCTCCATTTTGGACTGGTTTTACAGGCCAACACCAGTTTTCTGATGGAGACCCAATTGAAGATGATCCCGAGGGTGATCGGACTAACCTCAGTTGTTTCGAGAATTCGCAGAATGAACTCGACTCCTCGGATCTCATCTTCAATGGCCAAGACCCTTATGACAATCAAAGTGGCTGCACAATGGAGAATAGAGAACTCATTCTCTTCCACAATGAGGATCAAACTGAGGATTATACTGGTGATCCTAGAAACCTATACTATGAATTTGATTGGGCTTGTTTTCGATATTGGTTTGGACTTGGAGAAGATGAACAAGACTGGAATGGGCAAGAATTGAGACTAGAACAAGACTGCAGTTCTGAGGCTGTGGCCCTCCTAGAATCCATCCTGGGGTATTGGTCATGA ATGAATTGCAGTGGCTCTAACTCCATTGGCCTGCTCATGGCCAATGCAAACAGCTACGACTACCCCGGTCGGAGTCCCTCTCCATTTTGGACTGGTTTTACAGGCCAACACCAGTTTTCTGATGGAGACCCAATTGAAGATGATCCCGAGGGTGATCGGACTAACCTCAGTTGTTTCGAGAATTCGCAGAATGAACTCGACTCCTCGGATCTCATCTTCAATGGCCAAGACCCTTATGACAATCAAAGTGGCTGCACAATGGAGAATAGAGAACTCATTCTCTTCCACAATGAGGATCAAACTGAGGATTATACTGGTGATCCTAGAAACCTATACTATGAATTTGATTGGGCTTGTTTTCGATATTGGTTTGGACTTGGAGAAGATGAACAAGACTGGAATGGGCAAGAATTGAGACTAGAACAAGACTGCAGTTCTGAGGCTGTGGCCCTCCTAGAATCCATCCTGGGGTATTGGTCATGA MNCSGSNSIGLLMANANSYDYPGRSPSPFWTGFTGQHQFSDGDPIEDDPEGDRTNLSCFENSQNELDSSDLIFNGQDPYDNQSGCTMENRELILFHNEDQTEDYTGDPRNLYYEFDWACFRYWFGLGEDEQDWNGQELRLEQDCSSEAVALLESILGYWS Homology
BLAST of Csor.00g078960 vs. NCBI nr
Match: KAG6595286.1 (hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345 bits (884), Expect = 5.57e-120 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Csor.00g078960 vs. NCBI nr
Match: KAA0047323.1 (hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]) HSP 1 Score: 172 bits (435), Expect = 1.31e-51 Identity = 93/158 (58.86%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of Csor.00g078960 vs. NCBI nr
Match: KGN54204.1 (hypothetical protein Csa_017990 [Cucumis sativus]) HSP 1 Score: 169 bits (427), Expect = 2.02e-50 Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Csor.00g078960 vs. ExPASy TrEMBL
Match: A0A5A7TUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001440 PE=4 SV=1) HSP 1 Score: 172 bits (435), Expect = 6.35e-52 Identity = 93/158 (58.86%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of Csor.00g078960 vs. ExPASy TrEMBL
Match: A0A0A0KZF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293140 PE=4 SV=1) HSP 1 Score: 169 bits (427), Expect = 9.79e-51 Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|