Csor.00g078750 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g078750
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cytochrome c biogenesis FN
Location	Csor_Chr18: 5525994 .. 5530234 (-)
RNA-Seq Expression	Csor.00g078750
Synteny	Csor.00g078750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAAAGATCAGCTCCAGAATCTTTTACGAGGATAGCAGGGGCAGGGGCGAAGACGCTCGACAAAGTAGAGGAGCCAAGCAGTGAGATGAGAAGGAAGAGGAATTATCATCATTTTATTTAGTTAGGGATTCGATTAGGGATGAGACTGAAAAGGCACATGCAAATTGATATGAACCAAGAGACATCAATCATACAATATGCTTCAATGAAGATGTGAAGAAAAGGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGCTACATTGAAGAAGAATAAAGTTTGATTGTTGTAAATTTTGGGTGGGTTATAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGAATTTTTATTTAATTTCGGTTACATTTACATAATGGCTAATTATGGTCATAAAGTGTGAATGTTACAACTTTTGAAATGCCTTTAATAGTTTCATTTAAATCTAAGGGACTGGACTTCTTTCATAAAGCAGCTAATGAATTGACTCTCCGAGAGAGTACAAGGTAAAGCTCCCTCACCTGTAAACTTGGTTTCACAACTGAATTGCCTGCCCCTGTCGGTTTCACAGCTTCGCTCCTTCACCTCCCCTGTCGGTAAAGCAGCTTCGCTCCTTCACAAACCAGATTGAACTGAAAGACTCTTTTACTCTCTCTCCTGTAAGCAAAGCATATGAAATTCATTATCCTTCACTCAATCACCTAGTTATTCTGAAACTGTAATGTGGCTTGCTCCTCTCTGTCTTAGCCTTTCTTGAACTTACTCTCCTGCTCTAAGAAAGTCTCAACTCCTTATTCCTTCTCCTTCACCTGTCCCTTCTTTCTTTAGAAGGCTGTAACCGAGGTAAACTACTTCACCTTTGCCTGATTGAATGAGGTAAACTGGCTGGATGGAGGATGATTCTTTCACGAGGGTTGAACTATTTGACGGTCTCTTTTCTGTTCTTTCCTGAACCGTCACCTATTTCTTCTTTCACAGTAAACAAAGACTCAACTCAACAAGATATGAGTTATCAATAACCTTCTTTCACTCGGTAAAGCAAGCACTAAGTCAGTGATCTTTCACTCGGTCTCGCTGCTGATCTCATTCACCTTGGTAAAGCAGCTTCCTTCTTTCCTCTCCCAGGTCATCATACGAACCCCCCATTTTTCCGAAGCACTATCTGTCCCTTTCTGTGTCTATATTAGTTTAGGTCTAACGAGATCAACAAAATTCTTAACGAACAAGTTTCATAACATGTGTTATCTAGTCCTATTTTCTTTTTCAAATCCAACCTTATTCTACTGTTTGTATCTCCCCCAGAAACCCCTCGATCTCCAAGTCCCTTGTAAATAGGTGTTTGTTGGGCAAGTTTGGATGCCCCTACTGCCAACAAGTTTCTGGTCGGGATCGTGGAACTCTCGCTCGAGAAGTAAGTAAGCTGGTCCTTGTTTGGTCATAAGGATAATGGTTCTTATTAGGTCAGGGGCAGCAGCCGGCCTTGGGGTTACCCGCGATTGGTAATGGCATAACCTGAGGAGGGGTAAGGTAAAGAAGGTTACGCGCTGGTTAGCGCAGCGCATCTGTTTCGGGTACAGAGGTGAGGAGGGGTGCTAACCCGGCCACCCAACCGAGCAGGTCAGGGGCGAAGACCTGAGACCTACGTGCGAAGAGGCAAAGAAGCGAGACTGGAAAGGAGAGGGGGGGCCATAGGTTCAAATCCTACCACCTTTCTTGTGGATCATCTTGTGGTTACCAGATGGTGGGAATAAGAAAGCAGAAATGAGCACGAAATGTCAATATATGAATTGTTTCATTATTCGTTATTTCCCAGTTGATAAGATAAGGAATCAACTACAAGGGGGTAAGATTCGGATTACCTTGTCGATCGAATATCTCAAGGCAAGAACACTTGATTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAACGCAAGAACACTTGTTTGAGATTCGAATCATTCCACAAGCAAGATTGATCATATCGAGCTTGAATGATTCTACATGCAACCTAAACTACATAGATTGCAAAAGAAACTTAGCCATTGGCTAAAGAAAAGCACAAATGCTTCTTTTAATATATTTTCCAAGTCTCCCTTACAAATACAACATACATGGCTTTATATAGCCTCAAAATGAAAGCATTCCAAAAGTTGTAACATTCATACTTAATGACCATAATTAGCCATTATGTAAATGTAACCTATAAAGTAAATAAAATGTCTTAAAATACAATAACTCTAAATTACTCTAAATTGTAACCCACCCAAAATTTATAACCATCAAACTTCATTCCTCTTCAATGTGACATGAATTGCAACCTCTTTTGATAATTTTGACAACATTTTCTTCACATCTTCATTGAAGTATATTGTATGAATGATGTCTCTTGGTTCATATCACCAGTCTTTTCGTTGCATTCACTTACAACAAGAAAGAACTACCAGCGTTTGGTGCAGCACCTGCATTTTGGTGTATTCTTCTTTCTTTCTTTGGTCTTTCGTTCCGTCATATTCCTAATAACTTATCCAATTCCAACGTATAAACCGCGAATGCACCTTTCTTTTATAAAATCTCAGGGACATGGTCTAATCATGAGGGTAGTATTTTATCATGGTGTCCGATCCCAAGTGTTTATGGATTCCTTCCTTGTTACCGGGGTCGCCCCCAAAGCCATAATGTCCCAAAACGAGGAGGCCATAGAGAAACTCTTTTTTATTCCTATCTTTCGAACTTCGTGAAGAACCCCATTCGAGATCTCCCTCGTTATGACCAAAATAGTGGGTCTGCGCCCCTGTTGTGCACTCCCTTCGTTCTCCGAACCCTTGTTGATTCTGAACTTTGTTGGCGGAGGAACCGGACTTTTGACGGGCCAGCCCTTTTTTATGCGCCGCTTTACCCTGAAAGTCAAATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTTGCGAGAAGTAAAAAGGACTCATTCTTTGTTGTATCTGGCACGAGATGATAAAGAGAGAGCCTCATCTATCGATGAACAGCGGATTGACAGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTCTGATCCTTTTGTTCGAAATTTTTTCGTTCGTACCGAACCACTTGCAGAATCAAATCCTGTTTCACAAGATCCTATATCAGCTATACATCCTCCTTGTATTTATGCCGGAGACGTCGCCAGTGCTATGCGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCCCCGCCAATGCGTAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAAGAAGCGAGCTTTTTACCCTCAAATTCAAAGATGTGGGCGCAAAATGCTATCCTGCTCTATTGGTGCGTAGCAATAGAAGCCTGCTCAGGCTGCTTCGGTGGCATTTTTTCGCCTTCTCTTCCCTCTGGTCGGGAGGGCTAGTGGACACGGGGAGGGAGCTGGCGAAGCGTGTCATTCGTAATGCAAAAAAGAGACCACTACTTCGCTTCTTTCTTGGACTGCCGGCGCGAACACGTGGTCTCTGACCAGGACCAGGAACCCATTCGAATTTGGATCTTGATATGTCGGTGCTTTTTAACCGTAGGCATCTTGCCAGGAAGTTGGTGGGCTCATCATGATATAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTTGAAAATGCTTCTTTTATGCCTCGGGTATTAGCCACAGCTCGTATTCATTTAGTAATTTTACCCATTCTTCATTCTTGGACCTCATTTCTGAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCTGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAAGATGTTTATGGTGGTTCTTCCTTCTAATGATCTGCATATCAATGATTCTTTTCTACTAGATGAAGCAGCAGGCATCGGTACGTAGAACCTATCAAAAAGAGATGGTTGTGGCCCGAAGTACTCTTGTGCACCTACGGCACTTGGCTCGCGTGCAACCCCGCCCCCTTATGTTATGGAAGAATTGAATGGATTGCAGGGCAGGTTATTCAGAGCCAGCAATTGGATGCCGGATTTCGTCCCGCAACTAGAAGAAGATCGCTTCGGGGGTCAGAGTGGCGTGGCTGA

mRNA sequence

ATGAAAGAAAGATCAGCTCCAGAATCTTTTACGAGGATAGCAGGGGCAGGGGCGAAGACGCTCGACAAAGTAGAGGAGCCAAGCACGAGTTCTGATCCTTTTGTTCGAAATTTTTTCGTTCGTACCGAACCACTTGCAGAATCAAATCCTGTTTCACAAGATCCTATATCAGCTATACATCCTCCTTGTATTTATGCCGGAGACGTCGCCAGTGCTATGCGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCCCCGCCAATGCGTAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAAGAAGCGAGCTTTTTACCCTCAAATTCAAAGATGTGGGCGCAAAATGCTATCCTGCTCTATTGGTGCGTAGCAATAGAAGCCTGCTCAGGCTGCTTCGGTGGCATTTTTTCGCCTTCTCTTCCCTCTGGTCGGGAGGGCTAGTGGACACGGGGAGGGAGCTGGCGAAGCGTGTCATTCGCATCTTGCCAGGAAGTTGGTGGGCTCATCATGATATAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTTGAAAATGCTTCTTTTATGCCTCGGGAACCTTTTCAATACGATGAAGCAGCAGGCATCGGGCAGGTTATTCAGAGCCAGCAATTGGATGCCGGATTTCGTCCCGCAACTAGAAGAAGATCGCTTCGGGGGTCAGAGTGGCGTGGCTGA

Coding sequence (CDS)

ATGAAAGAAAGATCAGCTCCAGAATCTTTTACGAGGATAGCAGGGGCAGGGGCGAAGACGCTCGACAAAGTAGAGGAGCCAAGCACGAGTTCTGATCCTTTTGTTCGAAATTTTTTCGTTCGTACCGAACCACTTGCAGAATCAAATCCTGTTTCACAAGATCCTATATCAGCTATACATCCTCCTTGTATTTATGCCGGAGACGTCGCCAGTGCTATGCGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCCCCGCCAATGCGTAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAAGAAGCGAGCTTTTTACCCTCAAATTCAAAGATGTGGGCGCAAAATGCTATCCTGCTCTATTGGTGCGTAGCAATAGAAGCCTGCTCAGGCTGCTTCGGTGGCATTTTTTCGCCTTCTCTTCCCTCTGGTCGGGAGGGCTAGTGGACACGGGGAGGGAGCTGGCGAAGCGTGTCATTCGCATCTTGCCAGGAAGTTGGTGGGCTCATCATGATATAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTTGAAAATGCTTCTTTTATGCCTCGGGAACCTTTTCAATACGATGAAGCAGCAGGCATCGGGCAGGTTATTCAGAGCCAGCAATTGGATGCCGGATTTCGTCCCGCAACTAGAAGAAGATCGCTTCGGGGGTCAGAGTGGCGTGGCTGA

Protein sequence

MKERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHPPCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELFTLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIRILPGSWWAHHDIGRGGWWFRDPVENASFMPREPFQYDEAAGIGQVIQSQQLDAGFRPATRRRSLRGSEWRG

Homology

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BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot
Match: Q04647 (Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.5e-85
Identity = 167/249 (67.07%), Postives = 174/249 (69.88%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 215 KERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 274

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTL RSAGCVGSRI SELF
Sbjct: 275 PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLFRSAGCVGSRITSELF 334

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFK VG KCYPALL+RSNRS L LLR  FFA SSLW+G LVDTGRE AKRV+R     
Sbjct: 335 TLKFKHVGEKCYPALLLRSNRSPLMLLRRRFFALSSLWTGALVDTGREQAKRVVRNGKKD 394

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 208
                                                 IL GSWWAHH++GRGGWWFRDP
Sbjct: 395 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLNVGILLGSWWAHHELGRGGWWFRDP 454

[Close]

BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot
Match: Q04648 (Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 SV=3)

HSP 1 Score: 282.7 bits (722), Expect = 3.9e-75
Identity = 156/248 (62.90%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L        SSD FVRNFFV TEPLAE NPV QDPI AIHP
Sbjct: 213 KERASSIDEQRIDGALGIALFFSFFLLASSDFFVRNFFVCTEPLAELNPVLQDPILAIHP 272

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM F LCRSKMMNGIVALHSPPM KDA EKNG LL SAGCVG RI SELF
Sbjct: 273 PCIYAGDVASAMGFCLCRSKMMNGIVALHSPPMWKDAAEKNGRLLCSAGCVGFRITSELF 332

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFKDVGAKCYPALL+RSNRS L LLR  FFAFS LW+G LVDTGRE AKRV+R     
Sbjct: 333 TLKFKDVGAKCYPALLLRSNRSPLMLLRRRFFAFSLLWTGALVDTGREQAKRVVRNGKKD 392

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 IL GSWWA+H++G GGWWF DP
Sbjct: 393 TATSPLSWTAGANTVVSDQDQEPIRIWILTCWCFLNVGILLGSWWAYHELGWGGWWFWDP 452

[Close]

BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot
Match: Q9T6H8 (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidopsis thaliana OX=3702 GN=CCMFN1 PE=1 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-59
Identity = 123/160 (76.88%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L        SSDPFVRNFFV TEPLAE NPV QDPI AIHP
Sbjct: 214 KERASSIDEQRIDGALGIALFFSFFLLASSDPFVRNFFVCTEPLAELNPVLQDPILAIHP 273

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASA  FGLCRSKMMNGIVALHSPPMRKDA EKNGTLL SAGCVGSRI SELF
Sbjct: 274 PCIYAGDVASAEGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLCSAGCVGSRITSELF 333

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSG 162
           TLKFK VGAKCYPALL+RSNRS L LLR  FFAFSS W+G
Sbjct: 334 TLKFKHVGAKCYPALLLRSNRSPLMLLRRRFFAFSSFWAG 373

[Close]

BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot
Match: P36180 (Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=YMF4 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28
Identity = 77/185 (41.62%), Postives = 100/185 (54.05%), Query Frame = 0


Query: 30  SSDPFVRNFFVRTEPLAESNPVSQDPISAIHPPCIYAGDVASAMRFGLCRSKMMN----- 89
           SS+PFVR  FV T+ LAE NPV QDPI AIHPPCIYAG VASA+ F LC SK++N     
Sbjct: 183 SSNPFVRISFVCTKSLAELNPVLQDPILAIHPPCIYAGYVASAIGFCLCLSKIINRQQKS 242

Query: 90  --GIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELFT-LKFKDVGAKCYPALLVRSN 149
              I     P + K  P+K     R     G   R+  ++ + F  +  +     +VR  
Sbjct: 243 LKNIYIFFFPFLVK--PKKG----RRPEMAGPHTRTSPYSRVPFGSLAHREQAKSVVRKT 302

Query: 150 RSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIRILPGSWWAHHDIGRGGWWFRDPVEN 207
            ++     W   A + +W    +          + IL GSWWA+H++G GGWWF DPVEN
Sbjct: 303 NTMYFHFGWTCSANTVVWKQIQIWILTCWCFLTVGILLGSWWAYHELGWGGWWFWDPVEN 361

[Close]

BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot
Match: Q33884 (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) OS=Arabidopsis thaliana OX=3702 GN=CCMFN2 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 175 IRILPGSWWAHHDIGRGGWWFRDPVENASFMP 207
           + IL GSWWA+H++G GGWWF DPVENASFMP
Sbjct: 55  VGILLGSWWAYHELGWGGWWFWDPVENASFMP 86

[Close]

BLAST of Csor.00g078750 vs. NCBI nr
Match: KAG6573508.1 (hypothetical protein SDJN03_27395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514 bits (1325), Expect = 2.49e-184
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MKERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIH 60
           MKERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIH
Sbjct: 1   MKERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIH 60

Query: 61  PPCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSEL 120
           PPCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSEL
Sbjct: 61  PPCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSEL 120

Query: 121 FTLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIRILPG 180
           FTLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIRILPG
Sbjct: 121 FTLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIRILPG 180

Query: 181 SWWAHHDIGRGGWWFRDPVENASFMPREPFQYDEAAGIGQVIQSQQLDAGFRPATRRRSL 240
           SWWAHHDIGRGGWWFRDPVENASFMPREPFQYDEAAGIGQVIQSQQLDAGFRPATRRRSL
Sbjct: 181 SWWAHHDIGRGGWWFRDPVENASFMPREPFQYDEAAGIGQVIQSQQLDAGFRPATRRRSL 240

Query: 241 RGSEWRG 247
           RGSEWRG
Sbjct: 241 RGSEWRG 247

[Close]

BLAST of Csor.00g078750 vs. NCBI nr
Match: KAG6585908.1 (hypothetical protein SDJN03_18641, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336 bits (862), Expect = 1.38e-112
Identity = 169/221 (76.47%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 30  SSDPFVRNFFVRTEPLAESNPVSQDPISAIHPPCIYAGDVASAMRFGLCRSKMMNGIVAL 89
           SSDPFVRNFFVRTEPLAESNPVSQDPISAIHPPCIYAGDVASAM FGLCRSKMMNGIVAL
Sbjct: 5   SSDPFVRNFFVRTEPLAESNPVSQDPISAIHPPCIYAGDVASAMGFGLCRSKMMNGIVAL 64

Query: 90  HSPPMRKDAPEKNGTLLRSAGCVGSRIRSELFTLKFKDVGAKCYPALLVRSNRSLLRLLR 149
           HSPPMRKDAPEKNGTLLRSAGCVGSRIRSELFTLKFKDVGAKCYPALLVRSN SLL LLR
Sbjct: 65  HSPPMRKDAPEKNGTLLRSAGCVGSRIRSELFTLKFKDVGAKCYPALLVRSNISLLMLLR 124

Query: 150 WHFFAFSSLWSGGLVDTGRELAKRVIR--------------------------------- 207
             FFAFSSLWSGGLVDTGRELAKR++R                                 
Sbjct: 125 RRFFAFSSLWSGGLVDTGRELAKRLVRNAKKETTTSLLSWTAGANTVVSDQDQEPIRIWI 184

[Close]

BLAST of Csor.00g078750 vs. NCBI nr
Match: KAB1225126.1 (putative cytochrome c biosynthesis protein [Morella rubra])

HSP 1 Score: 332 bits (851), Expect = 5.79e-110
Identity = 173/249 (69.48%), Postives = 180/249 (72.29%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 31  KERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 90

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 91  PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 150

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLK KDVGAKCYPALL+RSNRSLL LLR  FFAFSSLW+G LVDTGRELAKRV+R     
Sbjct: 151 TLKLKDVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGRELAKRVVRNGKKD 210

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 211 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRCFLTVGILPGSWWAHHELGRGGWWFRDP 270

[Close]

BLAST of Csor.00g078750 vs. NCBI nr
Match: KAF5938784.1 (hypothetical protein HYC85_023043 [Camellia sinensis])

HSP 1 Score: 333 bits (854), Expect = 5.42e-108
Identity = 179/281 (63.70%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFF+RTEPLAESNPV QDPISAIHP
Sbjct: 187 KERASSIDEQRIDGALGIALFFSHFLSASSDPFVRNFFIRTEPLAESNPVPQDPISAIHP 246

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGI ALHSPPMRKDA EKNGTL RSAGCVGSRI SELF
Sbjct: 247 PCIYAGDVASAMGFGLCRSKMMNGIAALHSPPMRKDAAEKNGTLFRSAGCVGSRITSELF 306

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFK VGAKCYPAL +RSNRSLL LLR  FFAFSSLW+G LVD GRE AK V+R     
Sbjct: 307 TLKFKHVGAKCYPALFLRSNRSLLMLLRRRFFAFSSLWTGALVDVGREQAKPVVRNGKKD 366

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 239
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 367 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGILPGSWWAHHELGRGGWWFRDP 426

[Close]

BLAST of Csor.00g078750 vs. NCBI nr
Match: YP_009241680.1 (cytochrome c biogenesis FN [Ziziphus jujuba] >AMP43665.1 cytochrome c biogenesis FN [Ziziphus jujuba])

HSP 1 Score: 332 bits (852), Expect = 9.68e-108
Identity = 173/249 (69.48%), Postives = 180/249 (72.29%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 213 KERASSIDEQRIDGALGIALFFSSFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 272

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 273 PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 332

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFKDVGAKCYPALL+RSNRSLL LLR  FFAFSSLW+G LVDTGRE AKRV+R     
Sbjct: 333 TLKFKDVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGREQAKRVVRNEKKD 392

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 393 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGILPGSWWAHHELGRGGWWFRDP 452

[Close]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL
Match: A0A6A1WKW5 (Putative cytochrome c biosynthesis protein OS=Morella rubra OX=262757 GN=CJ030_MR1G018003 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 2.80e-110
Identity = 173/249 (69.48%), Postives = 180/249 (72.29%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 31  KERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 90

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 91  PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 150

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLK KDVGAKCYPALL+RSNRSLL LLR  FFAFSSLW+G LVDTGRELAKRV+R     
Sbjct: 151 TLKLKDVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGRELAKRVVRNGKKD 210

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 211 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRCFLTVGILPGSWWAHHELGRGGWWFRDP 270

[Close]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL
Match: A0A7J7GH86 (Cytochrom_C_asm domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_023043 PE=3 SV=1)

HSP 1 Score: 333 bits (854), Expect = 2.62e-108
Identity = 179/281 (63.70%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFF+RTEPLAESNPV QDPISAIHP
Sbjct: 187 KERASSIDEQRIDGALGIALFFSHFLSASSDPFVRNFFIRTEPLAESNPVPQDPISAIHP 246

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGI ALHSPPMRKDA EKNGTL RSAGCVGSRI SELF
Sbjct: 247 PCIYAGDVASAMGFGLCRSKMMNGIAALHSPPMRKDAAEKNGTLFRSAGCVGSRITSELF 306

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFK VGAKCYPAL +RSNRSLL LLR  FFAFSSLW+G LVD GRE AK V+R     
Sbjct: 307 TLKFKHVGAKCYPALFLRSNRSLLMLLRRRFFAFSSLWTGALVDVGREQAKPVVRNGKKD 366

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 239
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 367 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGILPGSWWAHHELGRGGWWFRDP 426

[Close]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL
Match: A0A142BZ21 (Cytochrome c biogenesis FN OS=Ziziphus jujuba OX=326968 GN=ccmFn PE=3 SV=1)

HSP 1 Score: 332 bits (852), Expect = 4.69e-108
Identity = 173/249 (69.48%), Postives = 180/249 (72.29%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 213 KERASSIDEQRIDGALGIALFFSSFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 272

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 273 PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 332

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFKDVGAKCYPALL+RSNRSLL LLR  FFAFSSLW+G LVDTGRE AKRV+R     
Sbjct: 333 TLKFKDVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGREQAKRVVRNEKKD 392

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 393 TTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGILPGSWWAHHELGRGGWWFRDP 452

[Close]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL
Match: A0A7D6BZF6 (Cytochrome c biogenesis FN OS=Luffa acutangula OX=56866 GN=ccmFn PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 3.74e-107
Identity = 172/249 (69.08%), Postives = 179/249 (71.89%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI G     L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 213 KERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 272

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 273 PCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 332

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFK VGAKCYPALL+RSNRSLL LLR  FFAFSSLW+GGLVDTGRE AKRV+R     
Sbjct: 333 TLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGGLVDTGREQAKRVVRNGKKE 392

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 393 TTTSLLCWTAGANTVVSDQDQEPIRIWILICRCFLTVGILPGSWWAHHELGRGGWWFRDP 452

[Close]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL
Match: A0A411GRW8 (Cytochrome c biogenesis FN OS=Morus notabilis OX=981085 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 5.29e-107
Identity = 172/249 (69.08%), Postives = 179/249 (71.89%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFVRTEPLAESNPV QDPISAIHP
Sbjct: 213 KERASSIDEQRIEGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPISAIHP 272

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAG VASAM FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 273 PCIYAGAVASAMAFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 332

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSGGLVDTGRELAKRVIR----- 181
           TLKFKDVGAKCYPALL+RSNRSLL LLR  FFAFSSLW+G LVDTGRE AKRV+R     
Sbjct: 333 TLKFKDVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGREQAKRVVRNEKKE 392

Query: 182 --------------------------------------ILPGSWWAHHDIGRGGWWFRDP 207
                                                 ILPGSWWAHH++GRGGWWFRDP
Sbjct: 393 TTTSPLCWTAGANTVVSDQDQEPILIWILTCRWFLTVGILPGSWWAHHELGRGGWWFRDP 452

[Close]

BLAST of Csor.00g078750 vs. TAIR 10
Match: ATMG00830.1 (cytochrome C biogenesis 382 )

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64
Identity = 127/160 (79.38%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 2   KERSAPESFTRIAGAGAKTLDKVEEPSTSSDPFVRNFFVRTEPLAESNPVSQDPISAIHP 61
           KER++     RI GA    L      S SSDPFVRNFFV TEPLAESNPV QDPISAIHP
Sbjct: 214 KERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVCTEPLAESNPVPQDPISAIHP 273

Query: 62  PCIYAGDVASAMRFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGCVGSRIRSELF 121
           PCIYAGDVASA  FGLCRSKMMNGIVALHSPPMRKDA EKNGTLLRSAGCVGSRI SELF
Sbjct: 274 PCIYAGDVASAEGFGLCRSKMMNGIVALHSPPMRKDAAEKNGTLLRSAGCVGSRITSELF 333

Query: 122 TLKFKDVGAKCYPALLVRSNRSLLRLLRWHFFAFSSLWSG 162
           TLKFK VGAKCYPALL+RSNRS L LLR  FFAFSS W+G
Sbjct: 334 TLKFKHVGAKCYPALLLRSNRSPLMLLRRRFFAFSSFWAG 373

[Close]

BLAST of Csor.00g078750 vs. TAIR 10
Match: ATMG00960.1 (Cytochrome C assembly protein )

HSP 1 Score: 75.9 bits (185), Expect = 5.2e-14
Identity = 28/33 (84.85%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 175 IRILPGSWWAHHDIGRGGWWFRDPVENASFMPR 208
           + ILPGSWWA+H++GRGGWWFRDPVENASFMPR
Sbjct: 55  VGILPGSWWAYHELGRGGWWFRDPVENASFMPR 87

The following BLAST results are available for this feature:

BLAST of Csor.00g078750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04647	2.5e-85	67.07	Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q04648	3.9e-75	62.90	Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 ...	[more]
Q9T6H8	1.8e-59	76.88	Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidop...	[more]
P36180	8.0e-28	41.62	Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=Y...	[more]
Q33884	2.9e-09	75.00	Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) ...	[more]

BLAST of Csor.00g078750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573508.1	2.49e-184	100.00	hypothetical protein SDJN03_27395, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585908.1	1.38e-112	76.47	hypothetical protein SDJN03_18641, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAB1225126.1	5.79e-110	69.48	putative cytochrome c biosynthesis protein [Morella rubra]	[more]
KAF5938784.1	5.42e-108	63.70	hypothetical protein HYC85_023043 [Camellia sinensis]	[more]
YP_009241680.1	9.68e-108	69.48	cytochrome c biogenesis FN [Ziziphus jujuba] >AMP43665.1 cytochrome c biogenesis...	[more]

BLAST of Csor.00g078750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WKW5	2.80e-110	69.48	Putative cytochrome c biosynthesis protein OS=Morella rubra OX=262757 GN=CJ030_M...	[more]
A0A7J7GH86	2.62e-108	63.70	Cytochrom_C_asm domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_...	[more]
A0A142BZ21	4.69e-108	69.48	Cytochrome c biogenesis FN OS=Ziziphus jujuba OX=326968 GN=ccmFn PE=3 SV=1	[more]
A0A7D6BZF6	3.74e-107	69.08	Cytochrome c biogenesis FN OS=Luffa acutangula OX=56866 GN=ccmFn PE=3 SV=1	[more]
A0A411GRW8	5.29e-107	69.08	Cytochrome c biogenesis FN OS=Morus notabilis OX=981085 GN=ccmFN PE=3 SV=1	[more]

BLAST of Csor.00g078750 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00830.1	5.5e-64	79.38	cytochrome C biogenesis 382	[more]
ATMG00960.1	5.2e-14	84.85	Cytochrome C assembly protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003569	Probable cytochrome c biosynthesis protein, plants	PRINTS	PR01412	CCBSBIOGNSIS	coord: 63..84 score: 87.5 coord: 34..49 score: 90.62
IPR003567	Cytochrome c-type biogenesis protein	PRINTS	PR01410	CCBIOGENESIS	coord: 47..69 score: 57.73 coord: 199..219 score: 38.36 coord: 165..191 score: 33.95
IPR003567	Cytochrome c-type biogenesis protein	PANTHER	PTHR43653	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	coord: 28..207
IPR002541	Cytochrome c assembly protein	PFAM	PF01578	Cytochrom_C_asm	coord: 39..206 e-value: 2.1E-11 score: 44.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR43653:SF1	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	coord: 28..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g078750.m01	Csor.00g078750.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0015232	heme transmembrane transporter activity