Csor.00g078470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCCACTTCCCTTTGTCTCTTCTTTCTTTTTGTTTAACAGCGGCCAGAGGCTTTTTTTGTTGCAGGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGGAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCTTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCAGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGA ATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGGAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCTTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCAGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGA ATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGGAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCTTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCAGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGA MADESYCKHNLKMAMLNHEHTFRHQVYELHRLYRIQKVLMKNIAENRGKTEEEEEEEEEEGEEIEFIQESEIELTLGPSSYSNQVGGRRRRRKKLGELMKGGSDSSSSSTTGSAPKGGILYRDGEFLGFLELQDETRLAQHHPNPWLCQVVSLNLT Homology
BLAST of Csor.00g078470 vs. NCBI nr
Match: KAG6571250.1 (hypothetical protein SDJN03_30165, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303 bits (776), Expect = 1.22e-103 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Csor.00g078470 vs. NCBI nr
Match: KAG7033654.1 (hypothetical protein SDJN02_03378 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 296 bits (757), Expect = 9.02e-101 Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Csor.00g078470 vs. NCBI nr
Match: XP_022932916.1 (uncharacterized protein LOC111439473 [Cucurbita moschata] >XP_023513141.1 uncharacterized protein LOC111777668 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 294 bits (753), Expect = 3.55e-100 Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Csor.00g078470 vs. NCBI nr
Match: XP_022985827.1 (uncharacterized protein LOC111483758 [Cucurbita maxima]) HSP 1 Score: 283 bits (725), Expect = 6.60e-96 Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of Csor.00g078470 vs. NCBI nr
Match: XP_038902582.1 (uncharacterized protein LOC120089237 [Benincasa hispida]) HSP 1 Score: 207 bits (528), Expect = 1.32e-65 Identity = 124/175 (70.86%), Postives = 137/175 (78.29%), Query Frame = 0
BLAST of Csor.00g078470 vs. ExPASy TrEMBL
Match: A0A6J1EXP9 (uncharacterized protein LOC111439473 OS=Cucurbita moschata OX=3662 GN=LOC111439473 PE=4 SV=1) HSP 1 Score: 294 bits (753), Expect = 1.72e-100 Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Csor.00g078470 vs. ExPASy TrEMBL
Match: A0A6J1J5Z3 (uncharacterized protein LOC111483758 OS=Cucurbita maxima OX=3661 GN=LOC111483758 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 3.20e-96 Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of Csor.00g078470 vs. ExPASy TrEMBL
Match: A0A1S3C5U9 (uncharacterized protein LOC103497380 OS=Cucumis melo OX=3656 GN=LOC103497380 PE=4 SV=1) HSP 1 Score: 185 bits (470), Expect = 4.36e-57 Identity = 112/174 (64.37%), Postives = 132/174 (75.86%), Query Frame = 0
BLAST of Csor.00g078470 vs. ExPASy TrEMBL
Match: A0A0A0LJL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277640 PE=4 SV=1) HSP 1 Score: 183 bits (464), Expect = 3.56e-56 Identity = 111/174 (63.79%), Postives = 131/174 (75.29%), Query Frame = 0
BLAST of Csor.00g078470 vs. ExPASy TrEMBL
Match: A0A6J1G6V7 (uncharacterized protein LOC111451410 OS=Cucurbita moschata OX=3662 GN=LOC111451410 PE=4 SV=1) HSP 1 Score: 181 bits (458), Expect = 2.25e-55 Identity = 105/163 (64.42%), Postives = 122/163 (74.85%), Query Frame = 0
BLAST of Csor.00g078470 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 8.6e-15 Identity = 65/176 (36.93%), Postives = 89/176 (50.57%), Query Frame = 0
BLAST of Csor.00g078470 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 8.6e-15 Identity = 65/176 (36.93%), Postives = 89/176 (50.57%), Query Frame = 0
BLAST of Csor.00g078470 vs. TAIR 10
Match: AT1G69360.1 (Plant protein of unknown function (DUF863) ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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