Csor.00g075560 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g075560
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhosphoglycerate mutase family protein
LocationCsor_Chr01: 11643374 .. 11645765 (+)
RNA-Seq ExpressionCsor.00g075560
SyntenyCsor.00g075560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATGGCGGTTTTGTTCGTCGGCGAAATGGTGTTATCATTGATACGGAGCTTTGTAAGTTGTCTAACTTTAAAATATTGTTGATTCTTGGATTGGAATGGAATACTTGCGATTATTGATGTGGATTTCTTTTGTTGAGAACTTCTTTGTTCTTTGTCGTTGTTTTTTTCGATTCGGAATTTTGTAATTTTTGAACTATGAGACATCGAAAGAATTTGTATTCTACTCTGTGAGTGAGAATTGTTTTATTTGTTTCGGCTCTTTGAATTATAATCTTCTCGACTGCGAAGGCTTAATTTGTAAGATGTTTTGTTCTATTGTCTGTGCTTTCTGTTTTTGTTGATTTTTAGATGTATGGACTCTGCTGGAGGTCTGAGTTTGCATCCGTCGCACCGTTGTATATTCATCTGATCTGTGATAAAATGTTTTCTCTCTCGATGCACTTAAGGTTGACTATCTATTTTTCTTGGATTTTAATTTGTTACTTGTGCTTATTGTGGAGTTCATAGCTTTCTGTTTGCATTTTTCAAGCATTCGAAGTTTATATAAATTTTACAGGTGAGAAATTCCCGGGAGTTCATGTAGTAAATTGTCATAAAATTTGATTTGATTTGATTTTTTGGATTAGATTAAATTGGGTTATTTGAATTAGATTTGATTTAGTTGTTTGAATTAGATTTAGTCTCAGTCAAGATTTGATTTGTAATGCTATATAATGAGAGAGTTCTCCCTCCATTCTGGATATCAATTGACAACAAGTGGAATTGGGGAGTTGGGAGAGTTTTTGGGTGTCACATCATATTTGTTGGGTGACACATTGGTGAGAGACTTTGTAGTGTGATAGTGAGGTATTCACTTGTAACACTTGGGTTTATTAGTGATTGATAGCTACCCGTGGATGTAGGGGAACTTCTTTTCTCCGAACCACGTAAATATCTTGGTGTCTCTTTGTGTGATTCTGTTCATTGGTGTTGTGAGTACATTCGTTCCGCTTCCGGCGCACAACAGTTCATAATGTTGCAATGGAAAAGGATCGCAGTTTGCTTCAGTCTTCTGATTATTTTGATGCTCAACTTATCATTTTAGGATGGCAACAGGTATATGCCTATTTTATTCGTACTTTCTACGTATGAGCCTACATACTGAAATACAACATTTACATAGGGAAAACGGCAATTAATTCGTGATAAGCTGATCAAGCTTTACAAATCATATCAAGATTGGTTCAGTGATGTTAAAGGACTCGTATGGTTAATTTAATCATTCATCATCTTCATGAACACTGAAACATCAATTTGTTCTAAGATCCAAAAATAATATATCTGCACTTTTAGTTTATGAATCTCTCTTTAGTTTCTTCTACTATAAAATGTCTACATGTTAATCTAGGAGAAGATTAAGAAAACCAAGTATGCAAATAGTTGGTAAAAGAGAGAAGACATACTCGTGTTAAGCAATGCTGTTTATGTCCATGGAGGTCAATTTTTTTCTTACTTTATTTCCCATTATTATCGCTCAAGTTGTTGCAGTCATTAAATTTTCTTTCTTCTTTACTTCATGCTGTTGAATCCTTTTCACTAGAAAGAACAAGTTGAGAAATAGTTGCAAGGATTATTCGGTAGCTATGTTATGACCTTCGTTGATGCCTTTGAATGTTGACAACTGCTAACTTCAGTTACATTTATGTCCCTTTCTATGATTATTCGGTAGCTATGTTATTACTGTTTCTCCCTTCTTGATTACCAATAACTTCGTGGTTACTAGTGGAGAAGAGAATTTTTTTACACCCAATATGCAACTCGGTGCCTGGACGACTTTAACGTACAGAAAAGGTAAAACAAAGGCAAATAAGTTATGTCACTCTCGATTATAAAGTTTCTTGCAAAGAAGCCCTCGACTCTTGAAAAAGTAGAACTGTGCATTGGTATACAGAAGTTATACGAGTCTTCTGGGTGTTGGCGTTCGCATCTCTTGATTTTTTATACTTAATGGTTTTCTACCTTGGCCAGGCTGTGGACACGGAAGGAGAAAGAGATTGCAATTGCCACCCACAGCGTGTTCTTATTTGAGCTTCTGAAGGGTTTTGGAAATGACTGCCATCCATCTATAAAGAGCGAAATCTGCAAATAGTAAGCATTACCCTTATCAGAATGGCAACTTCTAAGTCAGCACAACTAGAAAAGGCTTATTCAAATATCAGCCTGCACCAATAAAAAAGAAATCGCTATGGATCATAGACAATTTGACGTACAAAATCAGATGCAGTGGTTTTATTTGGAGTAAGTGATTTCACCCAATTCAACTCATTATTTGCAGTATGAAGGGATCAGGATCCATCATGGACCAATTACCCTGGCAAAACTTGAGGAAGAAGCTACAAGTTGCGTAG

mRNA sequence

ATGACTATGGCGGTTTTGTTCGTCGGCGAAATGGTGTTATCATTGATACGGAGCTTTATGTATGGACTCTGCTGGAGGTCTGAGTTTGCATCCGTCGCACCGTTGTATATTCATCTGATCTGTGATAAAATGTTTTCTCTCTCGATGCACTTAAGGCTGTGGACACGGAAGGAGAAAGAGATTGCAATTGCCACCCACAGCGTGTTCTTATTTGAGCTTCTGAAGGGTTTTGGAAATGACTGCCATCCATCTATAAAGAGCGAAATCTGCAAATATATGAAGGGATCAGGATCCATCATGGACCAATTACCCTGGCAAAACTTGAGGAAGAAGCTACAAGTTGCGTAG

Coding sequence (CDS)

ATGACTATGGCGGTTTTGTTCGTCGGCGAAATGGTGTTATCATTGATACGGAGCTTTATGTATGGACTCTGCTGGAGGTCTGAGTTTGCATCCGTCGCACCGTTGTATATTCATCTGATCTGTGATAAAATGTTTTCTCTCTCGATGCACTTAAGGCTGTGGACACGGAAGGAGAAAGAGATTGCAATTGCCACCCACAGCGTGTTCTTATTTGAGCTTCTGAAGGGTTTTGGAAATGACTGCCATCCATCTATAAAGAGCGAAATCTGCAAATATATGAAGGGATCAGGATCCATCATGGACCAATTACCCTGGCAAAACTTGAGGAAGAAGCTACAAGTTGCGTAG

Protein sequence

MTMAVLFVGEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRLWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSGSIMDQLPWQNLRKKLQVA
Homology
[Close]
BLAST of Csor.00g075560 vs. ExPASy Swiss-Prot
Match: Q9FGF0 (Phosphoglycerate mutase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g64460 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 193 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 230

[Close]
BLAST of Csor.00g075560 vs. ExPASy Swiss-Prot
Match: F4IBB2 (Phosphoglycerate mutase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g58280 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICK 92
           L TRKEKEIA+ THS FL++ L  FGNDC PS+K+EI K
Sbjct: 260 LSTRKEKEIAVVTHSGFLYQTLNSFGNDCDPSVKNEISK 298

[Close]
BLAST of Csor.00g075560 vs. ExPASy Swiss-Prot
Match: Q8GY96 (Phosphoglycerate mutase-like protein OS=Arabidopsis thaliana OX=3702 GN=PGM PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06
Identity = 22/37 (59.46%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEI 90
           +WTRKEKEIAI +HS FL  LL  FG DC   +K E+
Sbjct: 192 IWTRKEKEIAIVSHSGFLHGLLSSFGKDCCDDLKKEL 228

[Close]
BLAST of Csor.00g075560 vs. NCBI nr
Match: KAG6608117.1 (Phosphoglycerate mutase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234 bits (596), Expect = 1.62e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MTMAVLFVGEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRLWTRKEKE 60
           MTMAVLFVGEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRLWTRKEKE
Sbjct: 1   MTMAVLFVGEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRLWTRKEKE 60

Query: 61  IAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSGSIMDQLPWQNLRKKLQVA 115
           IAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSGSIMDQLPWQNLRKKLQVA
Sbjct: 61  IAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSGSIMDQLPWQNLRKKLQVA 115

[Close]
BLAST of Csor.00g075560 vs. NCBI nr
Match: KAG7031755.1 (hypothetical protein SDJN02_05796, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102 bits (255), Expect = 1.13e-25
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MTMAVLFVGEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRL 53
          MTMAVLFV EMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRL
Sbjct: 41 MTMAVLFVSEMVLSLIRSFMYGLCWRSEFASVAPLYIHLICDKMFSLSMHLRL 93

[Close]
BLAST of Csor.00g075560 vs. NCBI nr
Match: XP_042981243.1 (phosphoglycerate mutase-like protein 1 [Carya illinoinensis] >XP_042981244.1 phosphoglycerate mutase-like protein 1 [Carya illinoinensis] >KAG6652729.1 hypothetical protein CIPAW_05G026400 [Carya illinoinensis] >KAG6710926.1 hypothetical protein I3842_05G027800 [Carya illinoinensis])

HSP 1 Score: 82.4 bits (202), Expect = 1.28e-17
Identity = 37/51 (72.55%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 42 DKMFSLSMHLRLWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
          D  FSL+  LRLWTRKEKEIAI THS FLF  L  FGNDCHPS+K EICK+
Sbjct: 3  DPSFSLNFFLRLWTRKEKEIAIVTHSGFLFHTLTSFGNDCHPSVKKEICKH 53

[Close]
BLAST of Csor.00g075560 vs. NCBI nr
Match: XP_008466126.1 (PREDICTED: phosphoglycerate mutase-like protein 1 [Cucumis melo] >XP_008466128.1 PREDICTED: phosphoglycerate mutase-like protein 1 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 1.14e-15
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           LWTRKEKEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Sbjct: 193 LWTRKEKEIAIVTHSAFLFELMKCFGNDCHPSIKSEICKY 232

[Close]
BLAST of Csor.00g075560 vs. NCBI nr
Match: KAA0038646.1 (phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa] >TYK31247.1 phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.22e-15
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           LWTRKEKEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Sbjct: 193 LWTRKEKEIAIVTHSAFLFELMKCFGNDCHPSIKSEICKY 232

[Close]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match: A0A1S3CQI6 (phosphoglycerate mutase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103503638 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.53e-16
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           LWTRKEKEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Sbjct: 193 LWTRKEKEIAIVTHSAFLFELMKCFGNDCHPSIKSEICKY 232

[Close]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match: A0A5A7T8W1 (Phosphoglycerate mutase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005360 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.90e-16
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           LWTRKEKEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Sbjct: 193 LWTRKEKEIAIVTHSAFLFELMKCFGNDCHPSIKSEICKY 232

[Close]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match: A0A6J1DKQ7 (phosphoglycerate mutase-like protein 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021756 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.13e-15
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGS 96
           LWT KEKEIAI THS FLFELLK FGNDCHPS++SEI KYM GS
Sbjct: 193 LWTXKEKEIAIVTHSAFLFELLKVFGNDCHPSMESEISKYMTGS 236

[Close]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match: A0A0A0LE37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893350 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.74e-14
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           LWTRKEKEIAI THS FLFEL+K FGNDCHPSIKSEIC +
Sbjct: 193 LWTRKEKEIAIVTHSAFLFELMKCFGNDCHPSIKSEICTF 232

[Close]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match: A0A371EQZ4 (Phosphoglycerate mutase-like protein 1 OS=Mucuna pruriens OX=157652 GN=CR513_52526 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.25e-14
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 51  LRLWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY 92
           L+LWTRKEKEIA+ THS FLF  L+ FGNDCHP+IKSEICK+
Sbjct: 187 LKLWTRKEKEIAVVTHSSFLFNTLRAFGNDCHPNIKSEICKH 228

[Close]
BLAST of Csor.00g075560 vs. TAIR 10
Match: AT5G64460.2 (Phosphoglycerate mutase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 193 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 230

[Close]
BLAST of Csor.00g075560 vs. TAIR 10
Match: AT5G64460.1 (Phosphoglycerate mutase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 193 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 230

[Close]
BLAST of Csor.00g075560 vs. TAIR 10
Match: AT5G64460.3 (Phosphoglycerate mutase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 193 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 230

[Close]
BLAST of Csor.00g075560 vs. TAIR 10
Match: AT5G64460.4 (Phosphoglycerate mutase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 193 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 230

[Close]
BLAST of Csor.00g075560 vs. TAIR 10
Match: AT5G64460.5 (Phosphoglycerate mutase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 53  LWTRKEKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC 91
           LWTRKEKEIAI THS FLF  L    N+CHP +K EIC
Sbjct: 112 LWTRKEKEIAIVTHSGFLFHTLNALQNECHPDVKKEIC 149

The following BLAST results are available for this feature:
BLAST of Csor.00g075560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGF03.9e-0968.42Phosphoglycerate mutase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g64... [more]
F4IBB22.5e-0866.67Phosphoglycerate mutase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g58... [more]
Q8GY969.0e-0659.46Phosphoglycerate mutase-like protein OS=Arabidopsis thaliana OX=3702 GN=PGM PE=2... [more]
BLAST of Csor.00g075560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608117.11.62e-77100.00Phosphoglycerate mutase-like protein 1, partial [Cucurbita argyrosperma subsp. s... [more]
KAG7031755.11.13e-2598.11hypothetical protein SDJN02_05796, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_042981243.11.28e-1772.55phosphoglycerate mutase-like protein 1 [Carya illinoinensis] >XP_042981244.1 pho... [more]
XP_008466126.11.14e-1590.00PREDICTED: phosphoglycerate mutase-like protein 1 [Cucumis melo] >XP_008466128.1... [more]
KAA0038646.11.22e-1590.00phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa] >TYK31247.1 ph... [more]
BLAST of Csor.00g075560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQI65.53e-1690.00phosphoglycerate mutase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103503638 P... [more]
A0A5A7T8W15.90e-1690.00Phosphoglycerate mutase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1DKQ75.13e-1581.82phosphoglycerate mutase-like protein 1 isoform X2 OS=Momordica charantia OX=3673... [more]
A0A0A0LE371.74e-1485.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893350 PE=4 SV=1[more]
A0A371EQZ45.25e-1476.19Phosphoglycerate mutase-like protein 1 OS=Mucuna pruriens OX=157652 GN=CR513_525... [more]
BLAST of Csor.00g075560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64460.22.8e-1068.42Phosphoglycerate mutase family protein [more]
AT5G64460.12.8e-1068.42Phosphoglycerate mutase family protein [more]
AT5G64460.32.8e-1068.42Phosphoglycerate mutase family protein [more]
AT5G64460.42.8e-1068.42Phosphoglycerate mutase family protein [more]
AT5G64460.52.8e-1068.42Phosphoglycerate mutase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g075560.m01Csor.00g075560.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016868 intramolecular transferase activity, phosphotransferases