Csor.00g075210 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g075210
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Coatomer subunit zeta
Location	Csor_Chr01: 11900810 .. 11904774 (-)
RNA-Seq Expression	Csor.00g075210
Synteny	Csor.00g075210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTTGCCGTGCTGATTGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTACCATTTTTTTTTCTTACGCTTCTTGGCTTAATCGATTGAGCATTTTTTTTTTCGTTGCATTTTCATGTTTCTGATGTGCGTTAGCGAGAATGTGTGATTTGAATGGCTTCTTTGTGTAATCAATCGCTTTGTTGTGGTTTTCTGTGCCGATTGCTTTGATGATTGTGTGAAATGTGCGATTAGCTTCAGATGTATTCCTATTAGAATTGAAATAAGCTTGAGAATTTAGTGTTTAGGAGGGAAATGATGCTCTGTCACTGCCATCTACTCTAACTTGGACTGACTTTGTGTTCTATTGGTTAGGAATTCTTCGCCATCTAGTTTCATGCGATTGAACTGTTGATCATGATTTTTATTTGTTTTTTTTTAGGTTTCACGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTATGTTGCTTCGCACAAGTGAGTGGAATCTTCCGATCAGTTCTTTAGAAGCAATTTTGAACAATTCTCAGTGATGCATTATAATTGAAAACTGATCTTTGCAAAAAATGACGAGTTTTCATACTCTGCATCTGAGGTACCGTTTGTTGATCTTCCCACCCCTAGGGTGAGAAGGAGAAACTCAAAGGATAACGATTGAGCCTCATCCTCCTCTTCTATTGAGCTTCATCCCTGAGAATTTTCAAATGCGCGGGGGAAATCGATGAAGTTTATTTGCGTGATTATTGTTATAATGTTTTAGTATCGCAATTGTCGCCAAGTCCATTAAATCCAATAGGATATAATAGACAGCTAGAACTTACAAGCCTCCATTTCCATTTTCCTCCATTGCTGTTCTTTGATCGGTTTCGTTTCTCATCTCCAACAATAATAGACAGCTAGAAACTGCAAGTTCAAGCTTGTTTATGAATAATGAAGTCTTTGGTATTCCAAAGACAACGCCAATATGAGTCAAATGTTCTTAGGATCTGCCCCTTGGCCCCCTTGATTCTTTGAAAGACTTGTTGAACTTGATCTAGTGCCTTGATCTTTCATTATTATTCTTGCATAACCTAGACCAATTGGGGCATAAGCGAGCAACTTCTTTTCTTTTTCTGTAGACATAAATGGCATCCACTCTGCCAAGCAATGACTGCACGAATAATAGATTCTTCATAGGTACCTTCTATTTCCAAAGCCTCTTGGTCATCTCCTTAGAAATTGCCTAACTTACCAAGTAAGATCTTGAAGATGGATTAAGACCTTTGAAAATGGATTGAAGAGAAAGCTATTCTACTTCTCTATCACTTTAATGACTGTTAAAAATAAGGTTCCATCCCTGACATGGATATTTTGAATGTATAAAATGATCATCATTTTGCTTCCATCTAATTATTGTTATGGACTGAGTACTCATTTATCAAATTGTCTCTTTATCCTTCCTCCAACTCAAGAGGGAGGTATTGAAAACATAGTATTTGCTAGCTACAACTGCAAACCTCTAGGGGCTTCTTGAACTACTGTTGAAATGTGTGGTAGTTGCCATATAGTACAAAAGTTACAAAGGCTGTGTTCTTAGCTCGAATGGTCACCAATGTTTGAAATAAACTGTTTTACTGCTAAATAAAATGCTTCCCTCTCCAAATCTGGATGTTTCCTTTGATAATTCTTCTTTTTCTCTCTTTCTTTATTTTTTTTTCTCTTTCTTTCCTTTTTTCCCAATAGACTGCCTTGCTCATGAGGGAATCTTAAACAACAAGGTTAGCCAGTGGCTTGAATAAGAGTCAACCTTCCCCATCTAAAATAAAAGCATTTCTCATACATTACGTCAATCAGTCCCTTTCAATTTTGTGATACTTCTCATTGGATTGTCTTCTGTAGCTGGTTTTACCATTAAATTTGTCTAACATTCTGTAACAGGTCTGTATACGTTGTTTACACAGTCCTCGGTGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTGTAAGTAAATGCCAATTCTTCCCTTTTCTTTGGACTCAATTCCTTCTCCTCCCTCATCCTCCTGATAAAAAATTGCAGCGTTTCCTTCTTTTTTGTTTTGTTTTTATCCCGATCTTTTCTGTGTCATTTATCCTCTACGTTAATGTCCTTTCCTCTTCTTCAAGTGGCAGAAGTGATCTTTGTAATAACATCATTGATAAAGGATGCCTGCGGGAAAGCTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGATGGTATGTCCTTTCTTTTCTCCCTTACTCAGAAATCACCTTGTAGGTTCCGTGACTGAGCTGCCAAAAATCATGGGGCTCAAGCTCATTATCCAGCCAGATTTAGTGATAGTCATGTTAAAATCTTAAGACTTTAATTTAAGAAAACTCTTTGCAAATTGCCTTGGAGAGAACAGAGTGTCTGAGAAAACAAAATGGTGTTGTTGTTTTGTTGCGGGCATAGAACAAATTATCGATTTTTCCTTTTATTTTTGATCTGTAAGTTTGATTTTTGTCGAGCAATTTTCAGTCTCGAGGAGGAAAGATTTTTACATCCGTTTCTTATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTTGTGAAATGTCTTTCTCTGAATAGAAATTTGAGGGTCTCTCATAATTGCTAAAGAATACCCACTGTAGCATATTGACTACACTTGTTCTACTATAGATCATGTCTGCGGTGGTGAAACGTATCTCATGGCTAAAAATTTATTGAAGATTCAGACTGAGATATCTGTATTTACAATAATTATATTTCAGCTCTAATAAAATTCCTTGACAATAATAGTTGATACTTTGTTTGATCTACAATGTCATTGAATTAGATGGGTTAAATGCAGCGGTTAGCTTTTCACATCTTCAATGTTACTTATCTATTTCATGTCTGTGAAGGGTATCTTGGAGAACACAGAGAAAGACAGGATCAAGAGGCTGGTAAGGTTAAAGCCTCCAAATGAGTTTTGATTTAATGAAAGGGTTGCCATCCTCTCAGTCGTCCACTTCGACGTTACTGCTTCCACGTGGTTATCTTCCTGCTTTTCAACTCTTTTACCCGCAAGATCGTTTCAGCTTTCAGCCCTGTTTTATCATGGTGATCGTCGGTATGTTTACTATACTTCCTATTCTATTTTGTTCGGTTTGTAAGTTAGAACACACGATTCTAAAAGAATTCAAGGGATTGTTTGGATTAAGATTTTCATAGCGGGTAGGAAGCTTGCGAATACCGACTACATTGGGATTATGAAGTAAATTTGTAGTTGAGAACTAAAGATTAGTGGTTGAAACTTTGAAGTAGTATTCTTTGGTAAAAATACGTAGATTTGGTTTTGATATTCGTCTGAAGAAATGATACTTTCCTATTAAGAACTTCCTTGAAAGATAAGGCTCATGGACTAGCTAACTAGCTAGCTCAAGTTGTTGTGGTAGTCATCTATTTAAGGTTTAATATTCTACGAACCGAGGTGTCTATATGTTGATATAATCGGGTGGTCATTAGAGCCAATGAAAAAAGTAAAAGGACGCTTCGAAATCACCTATCTAAGATCTAATGTTTAATCAAATATAGTAGGGTTAGATGATTGTCCTTTTGTTCGGTAGTTAAGGCACCATTCCCTTCCTTCAGGGTCGGATGTTCAAATTTCTGTATCTACCTTGATTGAATTTATAAAAATATATGTATTTTGTTCGAACAAATTATCACACCTAGAGGTGAGAATTGAATTGAATTATGGACGAGGCAGGGCGAGATTGGCGATGTGGAAATCCCATCTCACAATGTCTGTTGCTCAAATGCCTTGTTTGTAA

mRNA sequence

ATGTTGCTTGCCGTGCTGATTGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCACGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTATGTTGCTTCGCACAAGTCTGTATACGTTGTTTACACAGTCCTCGGTGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACATCATTGATAAAGGATGCCTGCGGGAAAGCTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGATGGGTATCTTGGAGAACACAGAGAAAGACAGGATCAAGAGGCTGGTAAGATCGTTTCAGCTTTCAGCCCTGTTTTATCATGGTGATCGTCGGGCGAGATTGGCGATGTGGAAATCCCATCTCACAATGTCTGTTGCTCAAATGCCTTGTTTGTAA

Coding sequence (CDS)

ATGTTGCTTGCCGTGCTGATTGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCACGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTATGTTGCTTCGCACAAGTCTGTATACGTTGTTTACACAGTCCTCGGTGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACATCATTGATAAAGGATGCCTGCGGGAAAGCTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGATGGGTATCTTGGAGAACACAGAGAAAGACAGGATCAAGAGGCTGGTAAGATCGTTTCAGCTTTCAGCCCTGTTTTATCATGGTGATCGTCGGGCGAGATTGGCGATGTGGAAATCCCATCTCACAATGTCTGTTGCTCAAATGCCTTGTTTGTAA

Protein sequence

MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDEIVWMGILENTEKDRIKRLVRSFQLSALFYHGDRRARLAMWKSHLTMSVAQMPCL

Homology

[Close]

BLAST of Csor.00g075210 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.1e-14
Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY 60
           M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V       
Sbjct: 1   MINSLLITNNNGNIVFSKYYSNINDEKQSEYEKLLYQFTKDEWVNSKNEKHLVTEFSGYI 60

Query: 61  VVYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDAC-GKAPTERLFLDKYGKICLCL 120
            V+T +GD+ +++ G +E DELAL++V F I   +KD C  K  TE+ F+++  K  L L
Sbjct: 61  TVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKGVTEQNFIEQIPKFILYL 120

Query: 121 DEIVWMGILENTEKDRIK 137
           DEI+  G L+  + + I+
Sbjct: 121 DEIIQRGHLDQVQLESIQ 138

[Close]

BLAST of Csor.00g075210 vs. ExPASy Swiss-Prot
Match: Q5NA06 (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.7e-05
Identity = 42/166 (25.30%), Postives = 68/166 (40.96%), Query Frame = 0


Query: 5   VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTV 64
           +L+ +S G  +  +++          ++F   + A   K +   E  +    S +VVY  
Sbjct: 10  ILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKF 69

Query: 65  LGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDEIVWM 124
           + D+  +V G DE +EL LA V+   +  I          R  L+    I LCLDE+V  
Sbjct: 70  IQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDG 129

Query: 125 GILENTEKDRIKRLVRSFQL--SALFYHGDRRARLAMWKSHLTMSV 169
           GI+  T+   I   V    L  S         + LA  + H   S+
Sbjct: 130 GIVLETDAKAILEKVSGHGLEGSGSLTEQKLSSALATAREHFARSI 175

[Close]

BLAST of Csor.00g075210 vs. ExPASy Swiss-Prot
Match: Q54CA7 (Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-04
Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 0


Query: 4   AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVV 63
           A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   V+
Sbjct: 10  AIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCK-TSNCELEIIDNK--VVI 69

Query: 64  YTVLGDVAVYVVGKD-EYDELALAEVIFVITSLIKDACGKAP----TERLFLDKYGKICL 123
            +   DV ++VVG     +ELAL +V+  + SL K AC        T++ FL+ Y  I L
Sbjct: 70  GSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENYALIRL 129

Query: 124 CLDEIVWMGILENTEKDRI 136
            +DEIV  GI+   +++ I
Sbjct: 130 YIDEIVSDGIIFEVDEETI 145

[Close]

BLAST of Csor.00g075210 vs. NCBI nr
Match: KAG6608152.1 (TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347 bits (890), Expect = 1.97e-120
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVRSFQLSALFYHGDRRARLAMWKSHLTMSVAQMPCL 174
           IVWMGILENTEKDRIKRLVRSFQLSALFYHGDRRARLAMWKSHLTMSVAQMPCL
Sbjct: 121 IVWMGILENTEKDRIKRLVRSFQLSALFYHGDRRARLAMWKSHLTMSVAQMPCL 174

[Close]

BLAST of Csor.00g075210 vs. NCBI nr
Match: XP_022941369.1 (uncharacterized protein LOC111446682 [Cucurbita moschata] >XP_022982153.1 uncharacterized protein LOC111481073 [Cucurbita maxima] >XP_023524417.1 uncharacterized protein LOC111788321 [Cucurbita pepo subsp. pepo] >KAG7031791.1 hypothetical protein SDJN02_05832 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277 bits (708), Expect = 4.34e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVWMGILENTEKDRIKRLVR
Sbjct: 121 IVWMGILENTEKDRIKRLVR 140

[Close]

BLAST of Csor.00g075210 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 4.16e-91
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 271 bits (694), Expect = 5.91e-91
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia])

HSP 1 Score: 271 bits (694), Expect = 5.91e-91
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL
Match: A0A6J1J445 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111481073 PE=3 SV=1)

HSP 1 Score: 277 bits (708), Expect = 2.10e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVWMGILENTEKDRIKRLVR
Sbjct: 121 IVWMGILENTEKDRIKRLVR 140

[Close]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL
Match: A0A6J1FN50 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111446682 PE=3 SV=1)

HSP 1 Score: 277 bits (708), Expect = 2.10e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVWMGILENTEKDRIKRLVR
Sbjct: 121 IVWMGILENTEKDRIKRLVR 140

[Close]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1)

HSP 1 Score: 272 bits (695), Expect = 2.01e-91
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1)

HSP 1 Score: 272 bits (695), Expect = 2.01e-91
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 2.86e-91
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITS IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 140
           IVW GILENTEKDRIKRL+R
Sbjct: 121 IVWTGILENTEKDRIKRLIR 140

[Close]

BLAST of Csor.00g075210 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-64
Identity = 112/140 (80.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYV 60
           M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVY+
Sbjct: 1   MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSLIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT+LGDV++++VGKDEYDELALAE I++IT+ +KD CGK PTER+FLDKYG+ICLCLDE
Sbjct: 61  VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query: 121 IVWMGILENTEKDRIKRLVR 141
           IVW G+LENT+KDRIKRL+R
Sbjct: 121 IVWNGLLENTDKDRIKRLIR 140

The following BLAST results are available for this feature:

BLAST of Csor.00g075210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HLF1	6.1e-14	31.88	TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1	[more]
Q5NA06	6.7e-05	25.30	Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800...	[more]
Q54CA7	4.4e-04	30.22	Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb P...	[more]

BLAST of Csor.00g075210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608152.1	1.97e-120	100.00	TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941369.1	4.34e-93	100.00	uncharacterized protein LOC111446682 [Cucurbita moschata] >XP_022982153.1 unchar...	[more]
XP_008466411.1	4.16e-91	97.14	PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE...	[more]
KAA0038809.1	5.91e-91	96.43	SNARE-like superfamily protein [Cucumis melo var. makuwa]	[more]
XP_022134177.1	5.91e-91	97.14	uncharacterized protein LOC111006502 [Momordica charantia]	[more]

BLAST of Csor.00g075210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J445	2.10e-93	100.00	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111481073 PE=3 SV=1	[more]
A0A6J1FN50	2.10e-93	100.00	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111446682 PE=3 SV=1	[more]
A0A5D3E691	2.01e-91	97.14	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A1S3CRC6	2.01e-91	97.14	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1	[more]
A0A5A7TBS4	2.86e-91	96.43	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92...	[more]

BLAST of Csor.00g075210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15370.1	1.0e-64	80.00	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..141 e-value: 5.3E-17 score: 64.1
None	No IPR available	PANTHER	PTHR11043:SF19	SUBFAMILY NOT NAMED	coord: 3..140
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..140 e-value: 1.7E-5 score: 24.8
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..140
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g075210.m01	Csor.00g075210.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane