Csor.00g075010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAGACCTATCTTTCGTGCATTCACAACCGATACCACTGTGTTAGCCAGCTTGGTTCTATGCTGTTGGTATGCATTGCAGGGAGTTCAAGACGGGACGAGGGACCGGTACGAATGGCGTTTTGGAAACGGAGTCTACGAAAGGTTGGTTATTACATAGTTTGGTAAAAGTGAGTTTAGAAATTATGTAAAGATATTAATAATACGCTAATTTAAATAAATATCATTTATTAAATTAAAATTTTTAATTAATATGTACTTTATAATGGTTGGACTGTCACCAATTAGAAGCAAGAAAAATCTTTAAGAGTTGCATTACGTGGAGCTCAAGCAATGGATACCGTGATGACAACGCCGGTGTCTCTAGCATTTCCTCAGACGATGGCAAAGTTGAAATAATGACTCTGAAAAATGGTTTTCTTGTACTTTACATGTGTTTCATGTCAGAGGTATCTTAACACGTGGCAGATTCTCCTTCTCCTAAAAGTTGGATAAACGCCCCCCATCTTCGTCTTCTTCCTCCTCTACCAGCCGTTGGATCAAGAATCCCAACGGTCCTTTAACCCTACCATGGTTGTGTCAACTGACTCAACTTCTTTCTAGAATTACCCCTTGTTATGCGGTTAATTACATCTTTACCCTGTTTTCTCGGATCTATAAAACTGGCCTGTGCAATTTGTTGGGTTTGCCAAACTAACGCCCTGAGGGGCCCCTTGGAGGGTAAAGAATACTCGAGGCTTCTTCTTTTTCTCTCTGATGGTGACTTCTTCTTCGAAAACCAGATCCACCGGCCCGGTGCACCGATCACAGTCGCCGGGCGGATAGTTCTGTAACTCCCCGGCGCTGTCGTCTTTTACGTCGGCGTTTGCTTCATCCACTAGCTTAAACTTTTACTCGCATTCTTCTACTTTCCGTTCCGTTGATCACCGCGATTTCCGCAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGTCTCCTTCTCTTACTTCTTCTGTCCGTTTTTTCGTTGATAACCGTTCGATTTCTCCGGATCGGTCCGTTATTGTTTCGAGGAAAAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACTATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCGGCGGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGCTCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGGTTGACGATGCTTGA ATGTCTAGACCTATCTTTCGTGCATTCACAACCGATACCACTGTGTTAGCCAGCTTGGTTCTATGCTGTTGGTATGCATTGCAGGGAGTTCAAGACGGGACGAGGGACCGGTACGAATGGCGTTTTGGAAACGGAGTCTACGAAAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGTCTCCTTCTCTTACTTCTTCTGTCCGTTTTTTCGTTGATAACCGTTCGATTTCTCCGGATCGGTCCGTTATTGTTTCGAGGAAAAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACTATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCGGCGGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGCTCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGGTTGACGATGCTTGA ATGTCTAGACCTATCTTTCGTGCATTCACAACCGATACCACTGTGTTAGCCAGCTTGGTTCTATGCTGTTGGTATGCATTGCAGGGAGTTCAAGACGGGACGAGGGACCGGTACGAATGGCGTTTTGGAAACGGAGTCTACGAAAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGTCTCCTTCTCTTACTTCTTCTGTCCGTTTTTTCGTTGATAACCGTTCGATTTCTCCGGATCGGTCCGTTATTGTTTCGAGGAAAAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACTATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCGGCGGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGCTCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGGTTGACGATGCTTGA MSRPIFRAFTTDTTVLASLVLCCWYALQGVQDGTRDRYEWRFGNGVYESHHHHRRCTSPSRVNVFSSPSLTSSVRFFVDNRSISPDRSVIVSRKNHPASNVKRTCMCSPTTHPLSFRCSFHKNVSSSGGHSQTVSFPSIRLNMRRSAMANSLVRIGGVEGELVKRALTTLIRPSSHQQRRIAAFIPRSSRLAVMSKVDDA Homology
BLAST of Csor.00g075010 vs. NCBI nr
Match: KAG6608172.1 (hypothetical protein SDJN03_01514, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402 bits (1032), Expect = 3.17e-141 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Csor.00g075010 vs. NCBI nr
Match: XP_023524377.1 (uncharacterized protein LOC111788286 [Cucurbita pepo subsp. pepo] >XP_023524379.1 uncharacterized protein LOC111788286 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (692), Expect = 3.14e-89 Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of Csor.00g075010 vs. NCBI nr
Match: XP_022981771.1 (uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981772.1 uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981773.1 uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981774.1 uncharacterized protein LOC111480822 [Cucurbita maxima]) HSP 1 Score: 266 bits (679), Expect = 2.98e-87 Identity = 137/154 (88.96%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g075010 vs. NCBI nr
Match: XP_022937125.1 (uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothetical protein SDJN02_13257, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251 bits (642), Expect = 1.35e-81 Identity = 129/154 (83.77%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Csor.00g075010 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo]) HSP 1 Score: 251 bits (640), Expect = 2.54e-81 Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Csor.00g075010 vs. ExPASy TrEMBL
Match: A0A6J1J2S6 (uncharacterized protein LOC111480822 OS=Cucurbita maxima OX=3661 GN=LOC111480822 PE=4 SV=1) HSP 1 Score: 266 bits (679), Expect = 1.44e-87 Identity = 137/154 (88.96%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Csor.00g075010 vs. ExPASy TrEMBL
Match: A0A6J1FFN3 (uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC111443517 PE=4 SV=1) HSP 1 Score: 251 bits (642), Expect = 6.53e-82 Identity = 129/154 (83.77%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Csor.00g075010 vs. ExPASy TrEMBL
Match: E5GCC5 (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 1.23e-81 Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Csor.00g075010 vs. ExPASy TrEMBL
Match: A0A1S3BUD9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 1.23e-81 Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Csor.00g075010 vs. ExPASy TrEMBL
Match: A0A0A0L364 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1) HSP 1 Score: 250 bits (639), Expect = 1.81e-81 Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Csor.00g075010 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related ) HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43 Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 0
BLAST of Csor.00g075010 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related ) HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43 Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 0
BLAST of Csor.00g075010 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related ) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 89/156 (57.05%), Postives = 118/156 (75.64%), Query Frame = 0
BLAST of Csor.00g075010 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related ) HSP 1 Score: 85.5 bits (210), Expect = 5.3e-17 Identity = 59/160 (36.88%), Postives = 84/160 (52.50%), Query Frame = 0
BLAST of Csor.00g075010 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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