Csor.00g074650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTTTGCTCGGTTCTCCGACGTTCAGCATCGAAGTCCCGTTGGAGAACTCCTCCGCCGTCGCGGAGACTCATAATCGGGACGGGTCGGGTTTTCGCGAGTCCGGATCTGGTAGTTCGATTGGGGAAAACTCGTCGGACTCGTCGTCGATTGGAGTTCCCGACGATGATTCCGACGATGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGCTCGGATTGGATTCTCTCGAAGACGCTCTTGTAATCAAGTGAGTTTCTCTATCTCTATCTCTTAAATTTTCACTCTCCTATAACCTAGAAATCGAAAATTGAAGCCGAAAACGACGATTGAACCCTAAAATTTCCGATTAATCACACGAATTAGAGATTTAATACTCTTTAATGTGATGAAATTCCTGGGGGGGGGATTGGAATTGTAGAGGAGGCTTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATTTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGATAATCCTTTCAACAAGAGGAGAAGAATTTTAATGGCGTCAAAATGGTCGAGAAAAGCCTCATTCTACAGCTGGCGAAACCCTAAATCGATGCCTCTGCTTGCCTTAAACGAAGACGAAGAACAACAACAACCGGCGGAGGGTTCCGATTCAGAGGAAAGAAATCGAGAGAGCGATGAAGATGATGATCAAAACGAACGAAGAAGACAAACCCTAGGGCAAAGGTACCACGATCGGAAGCTCGTTAATGGCTTCAAATCAATGAGCTGTTTTGATCTGCAAGAATATGAACAGCAATAAGCGCGTAGTGTAATGAAATCGTTTGGCCTTTCTTCACTTATTGCTCTGAACAAAAAGAAAAGGAAAGGAAAAAAAAAAAAAATTATTTTTCTATTTTTCTTTTTTCTTTTTTCTTTTTATGTTTCATGAGTCCATGTAGATAAATTAATAATATATATTGTGTGTATATATATATATATATATATATATTTTTTTTTTTTTTTCCAAAATTCAAAGTGTGCATGAAATGAAAAAATATCCAAATATTTAGAATTAAAAAATGTATTTGGAAAATTATTTCTATATTTTTATTGTTTAATTATCTAATTTTAAAAAATATTTTAAAATTGTGTTTGTTTTATCTCACTTCTGTCCAGTAAATTTTAGCATTTAAATTATTAGTCAAATTAAAAAATATAAAATAATTGTTAAATATGTCATGCGTATTCACGTGCCTTGCCATAATCAATTTTAAATATATGTTATGGGCAAATTAGTAAATTTGTTCCTATTGGGCTTGTGGGCAAAAAAAAAAAACTCACCTTTTTACGTTTCTTTTATTGTTTTAATATAAAATGTTCACATAAGGGCACATTAGTAAATTTACTGTGGTTTGAAATATTTTTTTTTAAAAAAATATTTGTTCCTATTGGGCTGGGCCTTGTAGTACCCACATAACTAAAGTAAACTGGGCCAGGCCTCATCTTAGATAATTGGGCCCACAGGCCCAGCCTAATGATACCGGACATTTACCGCCAATTGTACGAAGTGTCGTCCTCTTCTTCTTTCTCTCTTTCGCTCCCATGGCCGATGGTTAGCTTCTCTGTCTCATCGGCACTCATAACCACCGTCGGAGAAGATGCTACGGGTCGCCTCATTATTCTATCCTCCATTGGCTTTATGCTTATCCGATTCCACGAACGTATCTTCTTGTCCGACTCCTTAATGCACGGCCACTGCCCGGCCGGGAAGACTCTCCTCGGAGTTCTAATCTCAAGCGGCTGACGTCTCTTGTGGTCCTACTCATTCGCCGGAAGGAGCTCCACAAGGTTTTACTTGTTTATGCTGTATATTTACTCTAATTTTTACTCAACTCGACTGCTCGTTTTTGGAGTGTGAGGAAAAACACTAAGGACTTCGTTTTTTTGCTCATGTTATTGCTTGCGGTTGTATGCGAAGTTTTAATATCATGCCGCGTCTGGACTAAGGGGAATCTGTTAGTTTTCTTTCTCCTCTTCATTCTCAGTGTTGGCCGCGTCTGGACTAAGGGGAATCTGTTAGTTTTCTTTCTCCACTTCATTCTCAGTGTTGGTAGCGTATGCGTTCTTATTAAATAAAATTATATGGTTTCGTGTAACGGATTTGTGTGGAAAAATATTTCGACGTCAGAAACTATGAGTGACGATTTCTATTGAAGTATATCCTTCTCGGAAATTGCATCAGTTTTTGGGTTTGAGTTTCGTATTGTTCTTTAATTTCTCAGTTATTTGAGATGATTGAAATTGCGAAGAGACTTTATGGAAAGTTGAATACAATTTTTATGAATGCTGTCCAGGAAGCCTGTGCTCACTGCGGTGATATTGATTTAGCTCCGAAGAATTCCACTGAAATGTCCAAACCAAATAATTGTGGAGTAGACAATGTCAGTTATGGCATGCTATTGAAGGTAATAAATTAAAGCATTCTAAGTTTTAGATTCCTTGATGCATTGTCGTTGAGTCATGTGGGAAATCCGTCATTGTGACAGTTGTATGGGAGAGTCGTGATTAGTTCTTGTTCCAGTTAAGTCTCAGTCTTTTCTCTGCCAGGGCTAG ATGGAGGTTTTGCTCGGTTCTCCGACGTTCAGCATCGAAGTCCCGTTGGAGAACTCCTCCGCCGTCGCGGAGACTCATAATCGGGACGGGTCGGGTTTTCGCGAGTCCGGATCTGGTAGTTCGATTGGGGAAAACTCGTCGGACTCGTCGTCGATTGGAGTTCCCGACGATGATTCCGACGATGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGCTCGGATTGGATTCTCTCGAAGACGCTCTTGTAATCAAAGGAGGCTTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATTTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGATAATCCTTTCAACAAGAGGAGAAGAATTTTAATGGCGTCAAAATGGTCGAGAAAAGCCTCATTCTACAGCTGGCGAAACCCTAAATCGATGCCTCTGCTTGCCTTAAACGAAGACGAAGAACAACAACAACCGGCGGAGGGTTCCGATTCAGAGGAAAGAAATCGAGAGAGCGATGAAGATGATGATCAAAACGAACGAAGAAGACAAACCCTAGGGCAAAGATGCTACGGGTCGCCTCATTATTCTATCCTCCATTGGCTTTATGCTTATCCGATTCCACGAACGTATCTTCTTGTCCGACTCCTTAATGCACGGCCACTGCCCGGCCGGGAAGACTCTCCTCGGAGTTCTAATCTCAAGCGGCTGACGTCTCTTGTGGTCCTACTCATTCGCCGGAAGGAGCTCCACAAGGAAGCCTGTGCTCACTGCGGTGATATTGATTTAGCTCCGAAGAATTCCACTGAAATGTCCAAACCAAATAATTGTGGAGTAGACAATGTCAGTTATGGCATGCTATTGAAGGGCTAG ATGGAGGTTTTGCTCGGTTCTCCGACGTTCAGCATCGAAGTCCCGTTGGAGAACTCCTCCGCCGTCGCGGAGACTCATAATCGGGACGGGTCGGGTTTTCGCGAGTCCGGATCTGGTAGTTCGATTGGGGAAAACTCGTCGGACTCGTCGTCGATTGGAGTTCCCGACGATGATTCCGACGATGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGCTCGGATTGGATTCTCTCGAAGACGCTCTTGTAATCAAAGGAGGCTTATCGAGGCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATTTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGATAATCCTTTCAACAAGAGGAGAAGAATTTTAATGGCGTCAAAATGGTCGAGAAAAGCCTCATTCTACAGCTGGCGAAACCCTAAATCGATGCCTCTGCTTGCCTTAAACGAAGACGAAGAACAACAACAACCGGCGGAGGGTTCCGATTCAGAGGAAAGAAATCGAGAGAGCGATGAAGATGATGATCAAAACGAACGAAGAAGACAAACCCTAGGGCAAAGATGCTACGGGTCGCCTCATTATTCTATCCTCCATTGGCTTTATGCTTATCCGATTCCACGAACGTATCTTCTTGTCCGACTCCTTAATGCACGGCCACTGCCCGGCCGGGAAGACTCTCCTCGGAGTTCTAATCTCAAGCGGCTGACGTCTCTTGTGGTCCTACTCATTCGCCGGAAGGAGCTCCACAAGGAAGCCTGTGCTCACTGCGGTGATATTGATTTAGCTCCGAAGAATTCCACTGAAATGTCCAAACCAAATAATTGTGGAGTAGACAATGTCAGTTATGGCATGCTATTGAAGGGCTAG MEVLLGSPTFSIEVPLENSSAVAETHNRDGSGFRESGSGSSIGENSSDSSSIGVPDDDSDDDEVQSKPKEGGLLGLDSLEDALVIKGGLSRHFSGKSKSFANLSEVIQVKDLEKPDNPFNKRRRILMASKWSRKASFYSWRNPKSMPLLALNEDEEQQQPAEGSDSEERNRESDEDDDQNERRRQTLGQRCYGSPHYSILHWLYAYPIPRTYLLVRLLNARPLPGREDSPRSSNLKRLTSLVVLLIRRKELHKEACAHCGDIDLAPKNSTEMSKPNNCGVDNVSYGMLLKG Homology
BLAST of Csor.00g074650 vs. ExPASy Swiss-Prot
Match: Q8VYD6 (Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana OX=3702 GN=CBSPPR1 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 34/85 (40.00%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of Csor.00g074650 vs. NCBI nr
Match: KAG6608207.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 563 bits (1452), Expect = 3.27e-202 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Csor.00g074650 vs. NCBI nr
Match: XP_022940912.1 (uncharacterized protein LOC111446357 [Cucurbita moschata] >KAG7037565.1 hypothetical protein SDJN02_01193 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352 bits (902), Expect = 1.20e-119 Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
BLAST of Csor.00g074650 vs. NCBI nr
Match: XP_023524376.1 (uncharacterized protein LOC111788285 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347 bits (890), Expect = 8.06e-118 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Csor.00g074650 vs. NCBI nr
Match: XP_022981755.1 (uncharacterized protein LOC111480811 [Cucurbita maxima]) HSP 1 Score: 338 bits (868), Expect = 1.85e-114 Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Csor.00g074650 vs. NCBI nr
Match: XP_038898503.1 (uncharacterized protein LOC120086121 [Benincasa hispida]) HSP 1 Score: 246 bits (629), Expect = 5.91e-78 Identity = 153/210 (72.86%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Csor.00g074650 vs. ExPASy TrEMBL
Match: A0A6J1FKY0 (uncharacterized protein LOC111446357 OS=Cucurbita moschata OX=3662 GN=LOC111446357 PE=4 SV=1) HSP 1 Score: 352 bits (902), Expect = 5.83e-120 Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
BLAST of Csor.00g074650 vs. ExPASy TrEMBL
Match: A0A6J1J0I5 (uncharacterized protein LOC111480811 OS=Cucurbita maxima OX=3661 GN=LOC111480811 PE=4 SV=1) HSP 1 Score: 338 bits (868), Expect = 8.97e-115 Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Csor.00g074650 vs. ExPASy TrEMBL
Match: A0A6J1ILJ2 (uncharacterized protein LOC111476326 OS=Cucurbita maxima OX=3661 GN=LOC111476326 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 7.89e-76 Identity = 148/217 (68.20%), Postives = 167/217 (76.96%), Query Frame = 0
BLAST of Csor.00g074650 vs. ExPASy TrEMBL
Match: A0A6J1FA94 (uncharacterized protein LOC111443706 OS=Cucurbita moschata OX=3662 GN=LOC111443706 PE=4 SV=1) HSP 1 Score: 240 bits (612), Expect = 1.44e-75 Identity = 148/214 (69.16%), Postives = 166/214 (77.57%), Query Frame = 0
BLAST of Csor.00g074650 vs. ExPASy TrEMBL
Match: A0A1S3CQX1 (uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=4 SV=1) HSP 1 Score: 229 bits (585), Expect = 1.22e-71 Identity = 148/209 (70.81%), Postives = 160/209 (76.56%), Query Frame = 0
BLAST of Csor.00g074650 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 115.5 bits (288), Expect = 7.0e-26 Identity = 90/202 (44.55%), Postives = 115/202 (56.93%), Query Frame = 0
BLAST of Csor.00g074650 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 7.4e-20 Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of Csor.00g074650 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-16 Identity = 73/206 (35.44%), Postives = 98/206 (47.57%), Query Frame = 0
BLAST of Csor.00g074650 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-10 Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 0
BLAST of Csor.00g074650 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09 Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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