Csor.00g074490 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g074490
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionGDSL esterase/lipase At1g71250-like isoform X1
LocationCsor_Chr11: 7370298 .. 7371905 (-)
RNA-Seq ExpressionCsor.00g074490
SyntenyCsor.00g074490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATTACTCGTAGCTGTAGAATTATAAAGAAACTCGATCTCGGGTTAGATTCATATGACTTTAGTTGTGGCCATCTGGAGCTCCATCAGAAGCGCAGCCCTCATTCAAGTCTTTGTTCTTCACTGCTCTATGTGACACTGATTGTTCTGTGGGGGCTAAGTCTTGCAGCTCCAAGGATCCAGCATTACAGCCCATGTACTTTGGTGGGAGATTTCTTCCTGGTGGGGGGGGGGGGGGGGGGGGGGGAAATTATTGCGGCTTAAACGCTCTGTTTTACCCTCTTTCTCATCGACAAATTCTCCATCATTCCTTGCGACTCCCGATGGCACCACCCTTCTTCCTCATCTTCTTGGTTAGTCCCCTCCCTCTTGCTTGCCTATTCACTCTTTTTTGAATTATGTTTTCCAAACTCTCTCACAAAAATCAAAATCGATTTGAAATATTTAATTAATCTATACTTTCTACCTACCAGGACCCGAAGAAAAAGTCCAATATCTATTGATAGTATTACAATTGTGGTGTTCCCAAGATGGTTGGAGAAAGCAACAAACAATTGTGATGTCCCAAGTTGGTTGGAGAACAAGAATAAAATACTATCTAATAAGGGTGTGAAAATCTTTCCCGACGCGTTTTAAAGTTTTTGAGAAGAACACGAAAGGGTTGTTTTGTTATAAATGGTAATCAAAGCCACGACACCGGAATGATGTGTCAGCCTTTTTTTCTCGCTGTTGCCCCAAATGGGGTGGGTAGACACGACGATAATGTCCCCAATAAGGACACTCGCCCCATTGGGATGGATTTGAGTGTCCAACCTTCTCGATGTTCCCCAAATGGGATAGGACCAGAAACGGCGTGCCCATGTGCCCAATAAGGATACTAGCCTCAAAGGGGGTGGATTTAGTGGCGGTTCAACATCGATTGGAAAAAGGAACGAGTGTCAGCGGGAAGACACTGGGCCTCGAAAGAGGTGGATTGTGATGTCCCAAAGAAGAAACAAAAACACCCTTTGTAACGGGTTGTAGAAACCTTTCACTCCGGTGTCCGGAGTTACACTTTTACTTTTAATAAAACATTAAGTAAAAATGATACCCTTATTCTTTGCCAGCGTGAGGAGATGGGCGTTCCTCACTCCCAACCTTGGTACAATCAGAATGGTTCCATTGAAGCGATCTTAAATGGCCTCAGCTTGGGTTCGCCACAGGGCAACGATCGTGTGAGCGGCGGCCAAAGCCATCATCTCCTCAACCACAGCTGACGACCAAGTACTCGACACCCCTGCAGCTCTTGCAGCCTGACAACTCGGACTAGACCACTGGCCTTCGCAATTTTCATCCAATCTTCCCTCTTCTAATTCTCATTTGGCGAGGTCGATTTTATTCTCGACCATCCAGAGGCCAAAAAAAAACCAACTTGAAATTTCCTCAGCTGCTGGCCTCACAAATGTCGGTCGCTATACGAAAATCTCCACGAAAAGCAGGGGCGAAGAAGATCGTATGCATGGGAATACTGCCATTGGGATGTACTCCTCCGAGTTCTATCTCAATGGCGTGAGTCCCCCTGCGGATGTATATGACGAGAAAGGATGGGTGAAAAGAGATGAATGA

mRNA sequence

ATGTCGATTACTCGTAGCTGTAGAATTATAAAGAAACTCGATCTCGGGTTAGATTCATATGACTTTAGTTGTGGCCATCTGGAGCTCCATCAGAAGCGCAGCCCTCATTCAAGTCTTTGTTCTTCACTGCTCTATGTGACACTGATTGTTCTGTGGGGGCTAAGTCTTGCAGCTCCAAGGATCCAGCATTACAGCCCATGTACTTTGGTGGGAGATTTCTTCCTGCGTGAGGAGATGGGCGTTCCTCACTCCCAACCTTGGTACAATCAGAATGGTTCCATTGAAGCGATCTTAAATGGCCTCAGCTTGGGTTCGCCACAGGGCAACGATCGTAGGCCAAAAAAAAACCAACTTGAAATTTCCTCAGCTGCTGGCCTCACAAATGTCGGTCGCTATACGAAAATCTCCACGAAAAGCAGGGGCGAAGAAGATCGTATGCATGGGAATACTGCCATTGGGATGTACTCCTCCGAGTTCTATCTCAATGGCGTGAGTCCCCCTGCGGATGTATATGACGAGAAAGGATGGGTGAAAAGAGATGAATGA

Coding sequence (CDS)

ATGTCGATTACTCGTAGCTGTAGAATTATAAAGAAACTCGATCTCGGGTTAGATTCATATGACTTTAGTTGTGGCCATCTGGAGCTCCATCAGAAGCGCAGCCCTCATTCAAGTCTTTGTTCTTCACTGCTCTATGTGACACTGATTGTTCTGTGGGGGCTAAGTCTTGCAGCTCCAAGGATCCAGCATTACAGCCCATGTACTTTGGTGGGAGATTTCTTCCTGCGTGAGGAGATGGGCGTTCCTCACTCCCAACCTTGGTACAATCAGAATGGTTCCATTGAAGCGATCTTAAATGGCCTCAGCTTGGGTTCGCCACAGGGCAACGATCGTAGGCCAAAAAAAAACCAACTTGAAATTTCCTCAGCTGCTGGCCTCACAAATGTCGGTCGCTATACGAAAATCTCCACGAAAAGCAGGGGCGAAGAAGATCGTATGCATGGGAATACTGCCATTGGGATGTACTCCTCCGAGTTCTATCTCAATGGCGTGAGTCCCCCTGCGGATGTATATGACGAGAAAGGATGGGTGAAAAGAGATGAATGA

Protein sequence

MSITRSCRIIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAAPRIQHYSPCTLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQGNDRRPKKNQLEISSAAGLTNVGRYTKISTKSRGEEDRMHGNTAIGMYSSEFYLNGVSPPADVYDEKGWVKRDE
Homology
[Close]
BLAST of Csor.00g074490 vs. NCBI nr
Match: KAG6588526.1 (hypothetical protein SDJN03_17091, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379 bits (973), Expect = 7.36e-133
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MSITRSCRIIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAAPR 60
           MSITRSCRIIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAAPR
Sbjct: 1   MSITRSCRIIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAAPR 60

Query: 61  IQHYSPCTLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQGNDRRPKKNQLEI 120
           IQHYSPCTLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQGNDRRPKKNQLEI
Sbjct: 61  IQHYSPCTLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQGNDRRPKKNQLEI 120

Query: 121 SSAAGLTNVGRYTKISTKSRGEEDRMHGNTAIGMYSSEFYLNGVSPPADVYDEKGWVKRD 180
           SSAAGLTNVGRYTKISTKSRGEEDRMHGNTAIGMYSSEFYLNGVSPPADVYDEKGWVKRD
Sbjct: 121 SSAAGLTNVGRYTKISTKSRGEEDRMHGNTAIGMYSSEFYLNGVSPPADVYDEKGWVKRD 180

[Close]
BLAST of Csor.00g074490 vs. NCBI nr
Match: KAG6605849.1 (GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (248), Expect = 4.11e-21
Identity = 69/139 (49.64%), Postives = 79/139 (56.83%), Query Frame = 0 

Query: 1   MSITRSCRIIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA-- 60
           MSITRSCRIIKKLDLG D        +EL ++ +   SL  +  YVTLI L GLSLAA  
Sbjct: 24  MSITRSCRIIKKLDLGFDHMTLGVA-MELIRRAALFKSLFFTA-YVTLIGLLGLSLAAQG 83

Query: 61  -----------------------PRI-QHYS--PC----TLVGDFFLREEMGVPHSQPWY 107
                                  P + +++S  PC    T +    L EEMGVPHSQPWY
Sbjct: 84  SSITAMYLLGDSSVDCGLNALFYPLLHRNFSIIPCDSDGTTLLPHLLAEEMGVPHSQPWY 143

[Close]
BLAST of Csor.00g074490 vs. NCBI nr
Match: XP_022958402.1 (GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 81.6 bits (200), Expect = 1.65e-14
Identity = 60/131 (45.80%), Postives = 69/131 (52.67%), Query Frame = 0 

Query: 9   IIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA---------- 68
           I KKLDLG D        +EL +  +   SL  +  YVTLI L GLSLAA          
Sbjct: 4   ITKKLDLGFDHMTLGVA-MELIRSAALFKSLFFTA-YVTLIGLLGLSLAAQGSSITAMYL 63

Query: 69  ---------------PRI-QHYS--PC----TLVGDFFLREEMGVPHSQPWYNQNGSIEA 107
                          P + +++S  PC    T +    L EEMGVPHSQPWYNQNGSIEA
Sbjct: 64  LGDSSVDCGLNALFYPLLHRNFSIIPCDSDGTTLLPHLLAEEMGVPHSQPWYNQNGSIEA 123

[Close]
BLAST of Csor.00g074490 vs. NCBI nr
Match: XP_023533895.1 (GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.9 bits (185), Expect = 1.89e-12
Identity = 58/131 (44.27%), Postives = 66/131 (50.38%), Query Frame = 0 

Query: 9   IIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA---------- 68
           IIKKL LG D        +EL       S   ++  YVTLI L GLSLAA          
Sbjct: 4   IIKKLALGFDHMTLGVA-MELRSAVLFKSLFFTA--YVTLIGLLGLSLAAQGSSITAMYL 63

Query: 69  ---------------PRI-QHYS--PCTLVGD----FFLREEMGVPHSQPWYNQNGSIEA 107
                          P + +++S  PC   G       L E+MGVPHSQPWYNQNGSIEA
Sbjct: 64  LGDSSVDCGLNALFYPLLHRNFSIIPCDSDGTNLLPHLLAEKMGVPHSQPWYNQNGSIEA 123

[Close]
BLAST of Csor.00g074490 vs. NCBI nr
Match: XP_022995420.1 (GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 75.9 bits (185), Expect = 1.89e-12
Identity = 55/131 (41.98%), Postives = 65/131 (49.62%), Query Frame = 0 

Query: 9   IIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA---------- 68
           +IKKL LG +        +EL +     S   ++  YVTLI L GLSLAA          
Sbjct: 4   VIKKLALGFNHMTLGVA-MELRRAALFKSLFFTA--YVTLIGLLGLSLAARGSSITAMYL 63

Query: 69  ---------------PRIQH---YSPC----TLVGDFFLREEMGVPHSQPWYNQNGSIEA 107
                          P +      +PC    T +    L E+MGVPHSQPWYNQNGSIEA
Sbjct: 64  LGDSSVDCGLNALFYPLLHRNFSITPCDSDGTTLLPHLLAEKMGVPHSQPWYNQNGSIEA 123

[Close]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match: A0A6J1H1Q6 (GDSL esterase/lipase At1g71250-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459637 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.01e-15
Identity = 60/131 (45.80%), Postives = 69/131 (52.67%), Query Frame = 0 

Query: 9   IIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA---------- 68
           I KKLDLG D        +EL +  +   SL  +  YVTLI L GLSLAA          
Sbjct: 4   ITKKLDLGFDHMTLGVA-MELIRSAALFKSLFFTA-YVTLIGLLGLSLAAQGSSITAMYL 63

Query: 69  ---------------PRI-QHYS--PC----TLVGDFFLREEMGVPHSQPWYNQNGSIEA 107
                          P + +++S  PC    T +    L EEMGVPHSQPWYNQNGSIEA
Sbjct: 64  LGDSSVDCGLNALFYPLLHRNFSIIPCDSDGTTLLPHLLAEEMGVPHSQPWYNQNGSIEA 123

[Close]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match: A0A6J1K3Z0 (GDSL esterase/lipase At1g71250-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490967 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.14e-13
Identity = 55/131 (41.98%), Postives = 65/131 (49.62%), Query Frame = 0 

Query: 9   IIKKLDLGLDSYDFSCGHLELHQKRSPHSSLCSSLLYVTLIVLWGLSLAA---------- 68
           +IKKL LG +        +EL +     S   ++  YVTLI L GLSLAA          
Sbjct: 4   VIKKLALGFNHMTLGVA-MELRRAALFKSLFFTA--YVTLIGLLGLSLAARGSSITAMYL 63

Query: 69  ---------------PRIQH---YSPC----TLVGDFFLREEMGVPHSQPWYNQNGSIEA 107
                          P +      +PC    T +    L E+MGVPHSQPWYNQNGSIEA
Sbjct: 64  LGDSSVDCGLNALFYPLLHRNFSITPCDSDGTTLLPHLLAEKMGVPHSQPWYNQNGSIEA 123

[Close]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match: A0A6J1H303 (GDSL esterase/lipase At1g71250-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459637 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.30e-11
Identity = 34/46 (73.91%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 66  PC----TLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQ 107
           PC    T +    L EEMGVPHSQPWYNQNGSIEAILNGLS GSPQ
Sbjct: 38  PCDSDGTTLLPHLLAEEMGVPHSQPWYNQNGSIEAILNGLSFGSPQ 83

[Close]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match: A0A6J1K1V7 (GDSL esterase/lipase At1g71250-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490967 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.09e-11
Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 65  SPC----TLVGDFFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQ 107
           +PC    T +    L E+MGVPHSQPWYNQNGSIEAILNGLS GSPQ
Sbjct: 37  TPCDSDGTTLLPHLLAEKMGVPHSQPWYNQNGSIEAILNGLSFGSPQ 83

[Close]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match: A0A5D3DDH5 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00910 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.78e-09
Identity = 25/35 (71.43%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 73  FFLREEMGVPHSQPWYNQNGSIEAILNGLSLGSPQ 107
           F L +++G+PH+QPWYNQNGS+EAILNGL+ GSPQ
Sbjct: 66  FLLADKIGLPHAQPWYNQNGSLEAILNGLNFGSPQ 100

The following BLAST results are available for this feature:
BLAST of Csor.00g074490 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g074490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588526.17.36e-133100.00hypothetical protein SDJN03_17091, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6605849.14.11e-2149.64GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022958402.11.65e-1445.80GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita moschata][more]
XP_023533895.11.89e-1244.27GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022995420.11.89e-1241.98GDSL esterase/lipase At1g71250-like isoform X1 [Cucurbita maxima][more]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1Q68.01e-1545.80GDSL esterase/lipase At1g71250-like isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1K3Z09.14e-1341.98GDSL esterase/lipase At1g71250-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1H3034.30e-1173.91GDSL esterase/lipase At1g71250-like isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1K1V78.09e-1170.21GDSL esterase/lipase At1g71250-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A5D3DDH59.78e-0971.43GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859... [more]
BLAST of Csor.00g074490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g074490.m01Csor.00g074490.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016788 hydrolase activity, acting on ester bonds