Csor.00g074450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g074450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Major latex allergen Hev b 5-like
Location	Csor_Chr11: 7334766 .. 7335472 (+)
RNA-Seq Expression	Csor.00g074450
Synteny	Csor.00g074450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTAGATACGGCCGTCATCCCTGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTTCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCTTGCTCGTTGAGGTATAATCCTAATTCATATTCAAAGTCATTTCTATTTATTTTCTAATATGCATTGCCTTCTATAGAAGGAAGCTGAAGTTCCGAGCTTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCGGCGGCAGGGGCAGGGGCGAAAGAAGTGAAGAGTGAAGCGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA

mRNA sequence

ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTAGATACGGCCGTCATCCCTGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTTCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTCCGAGCTTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCGGCGGCAGGGGCAGGGGCGAAAGAAGTGAAGAGTGAAGCGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA

Coding sequence (CDS)

ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTAGATACGGCCGTCATCCCTGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTTCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTCCGAGCTTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCGGCGGCAGGGGCAGGGGCGAAAGAAGTGAAGAGTGAAGCGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA

Protein sequence

MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAAAGAGAKEVKSEAKAAKKDEKSA

Homology

[Close]

BLAST of Csor.00g074450 vs. NCBI nr
Match: KAG6588522.1 (hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369 bits (946), Expect = 1.10e-127
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP
Sbjct: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
           RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA
Sbjct: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180

Query: 181 EEQPPKEAAAAAGAGAKEVKSEAKAAKKDEKSA 213
           EEQPPKEAAAAAGAGAKEVKSEAKAAKKDEKSA
Sbjct: 181 EEQPPKEAAAAAGAGAKEVKSEAKAAKKDEKSA 213

[Close]

BLAST of Csor.00g074450 vs. NCBI nr
Match: XP_023531836.1 (coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (720), Expect = 1.07e-92
Identity = 191/254 (75.20%), Postives = 193/254 (75.98%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPERVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDSAKP SLDSAKP SLDSAKP SLDS KPRSLDS KPRSLDS KPRSLDS KP
Sbjct: 61  EAKPPSLDSAKPTSLDSAKPTSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKP 120

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDS----------------------- 180
           RSLD  KPRSLDS KPRSLDS KPRSLDS KPRSLDS                       
Sbjct: 121 RSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLDSAKPRSLD 180

Query: 181 -----------------DKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAAAGAGAKEVK 213
                            DKPRSLDSLLVEKEAEV S+TKAEEQPPK AAA  GA  +EVK
Sbjct: 181 SAKPRSLDSAKPRSLDSDKPRSLDSLLVEKEAEVSSVTKAEEQPPKGAAAVTGA--EEVK 240

[Close]

BLAST of Csor.00g074450 vs. NCBI nr
Match: KAG7022371.1 (hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246 bits (628), Expect = 5.21e-80
Identity = 160/213 (75.12%), Postives = 160/213 (75.12%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDSAKPPSLDSAKP SLDSAK                                 
Sbjct: 61  EAKPPSLDSAKPPSLDSAKPTSLDSAK--------------------------------- 120

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
                          P SLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA
Sbjct: 121 ---------------PTSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 163

Query: 181 EEQPPKEAAAAAGAGAKEVKSEAKAAKKDEKSA 213
           EEQPPKEAAA AGA  KEVKSEAKAAKKDEKSA
Sbjct: 181 EEQPPKEAAAVAGA--KEVKSEAKAAKKDEKSA 163

[Close]

BLAST of Csor.00g074450 vs. NCBI nr
Match: XP_022970143.1 (uncharacterized protein LOC111469128 [Cucurbita maxima])

HSP 1 Score: 157 bits (396), Expect = 3.01e-45
Identity = 111/194 (57.22%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDEK  DDTE VVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDGVIDEK--DDTENVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDSAKPPSLDSA PPSLDSAKPPSLD                            
Sbjct: 61  EAKPPSLDSAKPPSLDSATPPSLDSAKPPSLD---------------------------- 120

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
                                                       SLLVEK+AEVPS+TKA
Sbjct: 121 --------------------------------------------SLLVEKQAEVPSVTKA 120

Query: 181 EEQPPKEAAAAAGA 194
           EEQPPK  A  AGA
Sbjct: 181 EEQPPKGTAVVAGA 120

[Close]

BLAST of Csor.00g074450 vs. NCBI nr
Match: XP_022931727.1 (patellin-1-like [Cucurbita moschata])

HSP 1 Score: 141 bits (356), Expect = 2.20e-39
Identity = 111/214 (51.87%), Postives = 113/214 (52.80%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDS                                                   
Sbjct: 61  EAKPPSLDS--------------------------------------------------- 116

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
                                                        LLVEKEAEVPS+TKA
Sbjct: 121 ---------------------------------------------LLVEKEAEVPSVTKA 116

Query: 181 EEQPPKEAAAAAGAGAKEVK-SEAKAAKKDEKSA 213
           EEQPPKEAAA AGA  KEVK SE KAAK+DEKSA
Sbjct: 181 EEQPPKEAAAVAGA--KEVKKSEEKAAKRDEKSA 116

[Close]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL
Match: A0A6J1I303 (uncharacterized protein LOC111469128 OS=Cucurbita maxima OX=3661 GN=LOC111469128 PE=4 SV=1)

HSP 1 Score: 157 bits (396), Expect = 1.46e-45
Identity = 111/194 (57.22%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDEK  DDTE VVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDGVIDEK--DDTENVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDSAKPPSLDSA PPSLDSAKPPSLD                            
Sbjct: 61  EAKPPSLDSAKPPSLDSATPPSLDSAKPPSLD---------------------------- 120

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
                                                       SLLVEK+AEVPS+TKA
Sbjct: 121 --------------------------------------------SLLVEKQAEVPSVTKA 120

Query: 181 EEQPPKEAAAAAGA 194
           EEQPPK  A  AGA
Sbjct: 181 EEQPPKGTAVVAGA 120

[Close]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL
Match: A0A6J1EUI1 (patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 1.07e-39
Identity = 111/214 (51.87%), Postives = 113/214 (52.80%), Query Frame = 0


Query: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60
           MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE
Sbjct: 1   MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVE 60

Query: 61  EAKPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKP 120
           EAKPPSLDS                                                   
Sbjct: 61  EAKPPSLDS--------------------------------------------------- 116

Query: 121 RSLDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKA 180
                                                        LLVEKEAEVPS+TKA
Sbjct: 121 ---------------------------------------------LLVEKEAEVPSVTKA 116

Query: 181 EEQPPKEAAAAAGAGAKEVK-SEAKAAKKDEKSA 213
           EEQPPKEAAA AGA  KEVK SE KAAK+DEKSA
Sbjct: 181 EEQPPKEAAAVAGA--KEVKKSEEKAAKRDEKSA 116

[Close]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL
Match: A0A1S3N6C5 (S-antigen protein-like OS=Salmo salar OX=8030 GN=LOC106577417 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.13e-20
Identity = 70/102 (68.63%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 63  KPPSLDSAKPPSLDSAKPPSLDSAKPPSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRS 122
           K PSLD  K PSLD  K PSLD  K PSLDSDK  SLDSDK  SLDSDK  SLD DK  S
Sbjct: 279 KSPSLDYVKSPSLDYVKSPSLDYVKSPSLDSDKSPSLDSDKSPSLDSDKSPSLDYDKSPS 338

Query: 123 LDFDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLDSDKPRSLD 164
           LD+DK  SLD  K  SLDSDK  SLDSDK  SLDSDK  SLD
Sbjct: 339 LDYDKSPSLDYVKSPSLDSDKSLSLDSDKSPSLDSDKSPSLD 380

[Close]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL
Match: A0A5A7TGB5 (Major latex allergen Hev b 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00890 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.45e-16
Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 1  MGACATKPKAKVDT-AVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVV 60
          MGACATKPK K D  A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+
Sbjct: 1  MGACATKPKVKTDDLATIPAPEPIDHDIVKNNEEIKVVEEEKKVDQT-DEKKKEDNEKVI 60

Query: 61 VEEAKPPSLDS 69
          VE+ K PSL S
Sbjct: 61 VEKEKSPSLAS 70

[Close]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL
Match: A0A1S3BGT9 (major latex allergen Hev b 5-like OS=Cucumis melo OX=3656 GN=LOC103489688 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.80e-16
Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 1  MGACATKPKAKVDT-AVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVV 60
          MGACATKPK K D  A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+
Sbjct: 1  MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQT-DEKKKEDNEKVI 60

Query: 61 VEEAKPPSLDS 69
          VE+ K PSL S
Sbjct: 61 VEKEKSPSLAS 70

The following BLAST results are available for this feature:

BLAST of Csor.00g074450 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g074450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588522.1	1.10e-127	100.00	hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531836.1	1.07e-92	75.20	coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022371.1	5.21e-80	75.12	hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022970143.1	3.01e-45	57.22	uncharacterized protein LOC111469128 [Cucurbita maxima]	[more]
XP_022931727.1	2.20e-39	51.87	patellin-1-like [Cucurbita moschata]	[more]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I303	1.46e-45	57.22	uncharacterized protein LOC111469128 OS=Cucurbita maxima OX=3661 GN=LOC111469128...	[more]
A0A6J1EUI1	1.07e-39	51.87	patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1	[more]
A0A1S3N6C5	6.13e-20	68.63	S-antigen protein-like OS=Salmo salar OX=8030 GN=LOC106577417 PE=4 SV=1	[more]
A0A5A7TGB5	2.45e-16	69.01	Major latex allergen Hev b 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BGT9	8.80e-16	69.01	major latex allergen Hev b 5-like OS=Cucumis melo OX=3656 GN=LOC103489688 PE=4 S...	[more]

BLAST of Csor.00g074450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g074450.m01	Csor.00g074450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding