Csor.00g074410 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g074410
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	methyl-CpG-binding domain protein 4-like protein
Location	Csor_Chr11: 7300111 .. 7301412 (-)
RNA-Seq Expression	Csor.00g074410
Synteny	Csor.00g074410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGCAACTACAATCATGAACCCTAATCCCTCTCCTCCCTCCTCATCATTCCCCGATTTCTTGTTTTCCCAATTCGCCTTTCAAGGTTGTTCCTCTTCCAGATTTCGCTTTCCTCCTTCCAAATGCCCCTCCGAGTCGAATCGTCAAAACCCCACGCCGGAGGATTTCACCCAAAAGAGGAGCAGTCTCATGGCGCAAAACTCTCCGATTTCGACTCTTGAGGTTCTCCAAACCTCTGAAGCAAATCATCAGAAGACAGCCGCATGGCACGAGATTCCGATTTTGTGTATTGAGGATCTTCAGGATGATCCGAAGCGTGAGATTTCCACATTAACCATAGAGGATGTCCAAGAAGTTTCACCCAAAACCCCAACTTCTGAAAGGGAAAGGGTTTCAGCGCATGAGCCTCCTATATTAACTCTAGAGGATCTTCAAAATGCAAAATCGGACCATCAACCGGCGATGAAGCCTCCATTGGCTCGTAGGGTTTTACGGTTTTACCGGCAGTTTGGGTTTGATGAACAAATAGTGCAAAAAACTCCACCTCCTGTCCGAAATTCCATGCCAGTTCAACTTGATGAACGTGTAGTTTCGCGTCATTTCCAGGAATCAAAATCAACCCAGCAAGGAGAACGAATTGTATCACGCTACTTTCAACACTCGGAGATAGAACAAGCATCCCATAATGAGGATGAGGATGTCAATGCCACAGATCAACCAATTAAAAGATCAGGGGTCGGAGAATACAGAAAAAGGAGGAGGAAAGACGTAGCTCCTAGCTCCGATAATTCAAAAGCATATCAACGTTCAATTAGAAAATCCTCACGTTCTGTTAAAAAATCGGGAACGGATAAACGAGTGCGGATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAATCCTGAAGTGGAGATTGAAGTTTCACCTTCATTACAAAATTCAAAAACAAATCAACAAGGAGAGCGGGTAGTCTCACGTTTCTTTCAAAAATCAGAAGAACAAGAAGTAGTGAACAATCAGCAAGAGGTTACACAGCAGCCAAGTCAGTGTGCAAAATCTGTTAAAAGAATCCGTAAACCAGCCAAGGAAAGAAAAGTGAGGGATAAAGTTTCTGCTAGGCCTAGAACCACTCTTTCGGCTGACGAGTTGTTTCTGGAAGCTTATAGAAGAAAATCGCCAGATGATACATGGAAACCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCTTACGACCCTTGGAGGGTTCTTGTCATATGTATGCTCCTTAACCGGACGACTGGGCAGCTATGA

mRNA sequence

ATGACTGCAACTACAATCATGAACCCTAATCCCTCTCCTCCCTCCTCATCATTCCCCGATTTCTTGTTTTCCCAATTCGCCTTTCAAGGTTGTTCCTCTTCCAGATTTCGCTTTCCTCCTTCCAAATGCCCCTCCGAGTCGAATCGTCAAAACCCCACGCCGGAGGATTTCACCCAAAAGAGGAGCAGTCTCATGGCGCAAAACTCTCCGATTTCGACTCTTGAGGTTCTCCAAACCTCTGAAGCAAATCATCAGAAGACAGCCGCATGGCACGAGATTCCGATTTTGTGTATTGAGGATCTTCAGGATGATCCGAAGCGTGAGATTTCCACATTAACCATAGAGGATGTCCAAGAAGTTTCACCCAAAACCCCAACTTCTGAAAGGGAAAGGGTTTCAGCGCATGAGCCTCCTATATTAACTCTAGAGGATCTTCAAAATGCAAAATCGGACCATCAACCGGCGATGAAGCCTCCATTGGCTCGTAGGGTTTTACGGTTTTACCGGCAGTTTGGGTTTGATGAACAAATAGTGCAAAAAACTCCACCTCCTGTCCGAAATTCCATGCCAGTTCAACTTGATGAACGTGTAGTTTCGCGTCATTTCCAGGAATCAAAATCAACCCAGCAAGGAGAACGAATTGTATCACGCTACTTTCAACACTCGGAGATAGAACAAGCATCCCATAATGAGGATGAGGATGTCAATGCCACAGATCAACCAATTAAAAGATCAGGGGTCGGAGAATACAGAAAAAGGAGGAGGAAAGACGTAGCTCCTAGCTCCGATAATTCAAAAGCATATCAACGTTCAATTAGAAAATCCTCACGTTCTGTTAAAAAATCGGGAACGGATAAACGAGTGCGGATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAATCCTGAAGTGGAGATTGAAGTTTCACCTTCATTACAAAATTCAAAAACAAATCAACAAGGAGAGCGGGTAGTCTCACGTTTCTTTCAAAAATCAGAAGAACAAGAAGTAGTGAACAATCAGCAAGAGGTTACACAGCAGCCAAGTCAGTGTGCAAAATCTGTTAAAAGAATCCGTAAACCAGCCAAGGAAAGAAAAGTGAGGGATAAAGTTTCTGCTAGGCCTAGAACCACTCTTTCGGCTGACGAGTTGTTTCTGGAAGCTTATAGAAGAAAATCGCCAGATGATACATGGAAACCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCTTACGACCCTTGGAGGGTTCTTGTCATATGTATGCTCCTTAACCGGACGACTGGGCAGCTATGA

Coding sequence (CDS)

ATGACTGCAACTACAATCATGAACCCTAATCCCTCTCCTCCCTCCTCATCATTCCCCGATTTCTTGTTTTCCCAATTCGCCTTTCAAGGTTGTTCCTCTTCCAGATTTCGCTTTCCTCCTTCCAAATGCCCCTCCGAGTCGAATCGTCAAAACCCCACGCCGGAGGATTTCACCCAAAAGAGGAGCAGTCTCATGGCGCAAAACTCTCCGATTTCGACTCTTGAGGTTCTCCAAACCTCTGAAGCAAATCATCAGAAGACAGCCGCATGGCACGAGATTCCGATTTTGTGTATTGAGGATCTTCAGGATGATCCGAAGCGTGAGATTTCCACATTAACCATAGAGGATGTCCAAGAAGTTTCACCCAAAACCCCAACTTCTGAAAGGGAAAGGGTTTCAGCGCATGAGCCTCCTATATTAACTCTAGAGGATCTTCAAAATGCAAAATCGGACCATCAACCGGCGATGAAGCCTCCATTGGCTCGTAGGGTTTTACGGTTTTACCGGCAGTTTGGGTTTGATGAACAAATAGTGCAAAAAACTCCACCTCCTGTCCGAAATTCCATGCCAGTTCAACTTGATGAACGTGTAGTTTCGCGTCATTTCCAGGAATCAAAATCAACCCAGCAAGGAGAACGAATTGTATCACGCTACTTTCAACACTCGGAGATAGAACAAGCATCCCATAATGAGGATGAGGATGTCAATGCCACAGATCAACCAATTAAAAGATCAGGGGTCGGAGAATACAGAAAAAGGAGGAGGAAAGACGTAGCTCCTAGCTCCGATAATTCAAAAGCATATCAACGTTCAATTAGAAAATCCTCACGTTCTGTTAAAAAATCGGGAACGGATAAACGAGTGCGGATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAATCCTGAAGTGGAGATTGAAGTTTCACCTTCATTACAAAATTCAAAAACAAATCAACAAGGAGAGCGGGTAGTCTCACGTTTCTTTCAAAAATCAGAAGAACAAGAAGTAGTGAACAATCAGCAAGAGGTTACACAGCAGCCAAGTCAGTGTGCAAAATCTGTTAAAAGAATCCGTAAACCAGCCAAGGAAAGAAAAGTGAGGGATAAAGTTTCTGCTAGGCCTAGAACCACTCTTTCGGCTGACGAGTTGTTTCTGGAAGCTTATAGAAGAAAATCGCCAGATGATACATGGAAACCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCTTACGACCCTTGGAGGGTTCTTGTCATATGTATGCTCCTTAACCGGACGACTGGGCAGCTATGA

Protein sequence

MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQKRSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEVSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQKTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTTGQL

Homology

[Close]

BLAST of Csor.00g074410 vs. ExPASy Swiss-Prot
Match: Q0IGK1 (Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702 GN=MBD4L PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 75/232 (32.33%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 231 EDEDVNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIR--KSSRSVKKSGTDK-- 290
           +D+D + +D  I+R    E+    R+ V+P    S   Q+S     S     K G  K  
Sbjct: 123 DDDDDSVSDSHIERQECSEFHVEVRR-VSPYFQGSTVSQQSKEGCDSDSVCSKEGCSKVQ 182

Query: 291 -RVRIVSRYFQNSEKNPEVEIEVSPSLQNSKTNQQGE-------RVVSRFFQKSEEQEVV 350
            +V  VS YFQ S  + + + ++  S Q+ +  ++G        R VS +FQ+S      
Sbjct: 183 AKVPRVSPYFQASTIS-QCDSDIVSSSQSGRNYRKGSSKRQVKVRRVSPYFQES------ 242

Query: 351 NNQQEVTQQPSQCAKSVKRIRK-------------------PAKERKVRDKVSARPRTTL 410
                V++QP+Q  K ++   K                     K R VR      P   L
Sbjct: 243 ----TVSEQPNQAPKGLRNYFKVVKVSRYFHADGIQVNESQKEKSRNVRKTPIVSP--VL 302

Query: 411 SADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTTG 432
           S  +   + Y RK+PD+TW PP S   LLQ+DH +DPWRVLVICMLLN+T+G
Sbjct: 303 SLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSG 340

[Close]

BLAST of Csor.00g074410 vs. NCBI nr
Match: KAG6588518.1 (Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 833 bits (2151), Expect = 5.95e-304
Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK 60
           MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK
Sbjct: 1   MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK 60

Query: 61  RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV 120
           RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV
Sbjct: 61  RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV 120

Query: 121 SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK 180
           SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK
Sbjct: 121 SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK 180

Query: 181 TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ 240
           TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ
Sbjct: 181 TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ 240

Query: 241 PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK 300
           PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK
Sbjct: 241 PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK 300

Query: 301 NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK 360
           NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK
Sbjct: 301 NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK 360

Query: 361 PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL 420
           PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL
Sbjct: 361 PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL 420

Query: 421 VICMLLNRTTGQL 433
           VICMLLNRTTGQL
Sbjct: 421 VICMLLNRTTGQL 433

[Close]

BLAST of Csor.00g074410 vs. NCBI nr
Match: KAG7022375.1 (Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 832 bits (2148), Expect = 8.52e-302
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK 60
           MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK
Sbjct: 1   MTATTIMNPNPSPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQK 60

Query: 61  RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV 120
           RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV
Sbjct: 61  RSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEV 120

Query: 121 SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK 180
           SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK
Sbjct: 121 SPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQK 180

Query: 181 TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ 240
           TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ
Sbjct: 181 TPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQ 240

Query: 241 PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK 300
           PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK
Sbjct: 241 PIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEK 300

Query: 301 NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK 360
           NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK
Sbjct: 301 NPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRK 360

Query: 361 PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL 420
           PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL
Sbjct: 361 PAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVL 420

Query: 421 VICMLLNRTTGQ 432
           VICMLLNRTTGQ
Sbjct: 421 VICMLLNRTTGQ 432

[Close]

BLAST of Csor.00g074410 vs. NCBI nr
Match: XP_022931728.1 (methyl-CpG-binding domain protein 4-like protein [Cucurbita moschata])

HSP 1 Score: 754 bits (1946), Expect = 5.83e-271
Identity = 399/437 (91.30%), Postives = 412/437 (94.28%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSS-FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ 60
           MTATTIMNPN SPPSSS FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ
Sbjct: 1   MTATTIMNPNLSPPSSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ 60

Query: 61  KRSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQE 120
           KR++LMAQNSPISTLEVLQTSE+NHQKTAA  EIPILCIEDLQD+PKR  STLT+EDVQE
Sbjct: 61  KRTTLMAQNSPISTLEVLQTSESNHQKTAAGQEIPILCIEDLQDNPKRGSSTLTVEDVQE 120

Query: 121 VSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQ 180
           VSPKTPTSERERV  HEPPILTLED+QNAKSDHQPA++PPLARRVLRFYRQFGFDEQIVQ
Sbjct: 121 VSPKTPTSERERVLVHEPPILTLEDIQNAKSDHQPAIEPPLARRVLRFYRQFGFDEQIVQ 180

Query: 181 KTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED----V 240
           KTPP VRNSMPVQ DERVVSRHFQESKS QQGERIVSRYFQHSEIE+A+HNEDED    V
Sbjct: 181 KTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDEDEDV 240

Query: 241 NATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYF 300
           N TDQPIKRS VG+YRKRRRKDVA SSDNSKAYQRSIRKSSR VK+SGTDKRVR VSRYF
Sbjct: 241 NVTDQPIKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRFVKESGTDKRVRFVSRYF 300

Query: 301 QNSEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSV 360
           QNSEKNPEVEIEVSP LQNSKT QQGER+VSRFFQKSEEQEVVNNQQEV Q PSQCAKSV
Sbjct: 301 QNSEKNPEVEIEVSPPLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAKSV 360

Query: 361 KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYD 420
           KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYD
Sbjct: 361 KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYD 420

Query: 421 PWRVLVICMLLNRTTGQ 432
           PWRVLVICMLLNRTTGQ
Sbjct: 421 PWRVLVICMLLNRTTGQ 437

[Close]

BLAST of Csor.00g074410 vs. NCBI nr
Match: XP_023529473.1 (methyl-CpG-binding domain protein 4-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 732 bits (1890), Expect = 1.40e-262
Identity = 394/435 (90.57%), Postives = 405/435 (93.10%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSS-FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ 60
           M+ATTIMNPN SPPSSS FPDF         CSS RFRFPPSKCPS+SN QNPTPEDFTQ
Sbjct: 1   MSATTIMNPNLSPPSSSSFPDFSVQ------CSS-RFRFPPSKCPSDSNPQNPTPEDFTQ 60

Query: 61  KRSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQE 120
           KR++LMAQNSPISTLEVLQTSE+NHQKTA  HEIPILCIEDLQD+PKR  STLT+EDVQ+
Sbjct: 61  KRTTLMAQNSPISTLEVLQTSESNHQKTAVGHEIPILCIEDLQDNPKRGTSTLTVEDVQQ 120

Query: 121 VSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQ 180
           VSPKTPTSERERV AHEPPILTLEDLQNAKSDHQPA+KPPLARRVLRFYRQFGFDEQIVQ
Sbjct: 121 VSPKTPTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFYRQFGFDEQIVQ 180

Query: 181 KTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED--VNA 240
           KTPP VRNSMPVQ DERVVSRHFQESKSTQQGERIVSRYFQHSEIEQA+HNEDED  VN 
Sbjct: 181 KTPPSVRNSMPVQRDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQAAHNEDEDEDVNV 240

Query: 241 TDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQN 300
           TDQPIKRS VGEYRKRRRKDVA SSDNSKAYQRSIRKSSRSVKKSG DKRVRIVSRYFQN
Sbjct: 241 TDQPIKRSRVGEYRKRRRKDVASSSDNSKAYQRSIRKSSRSVKKSGKDKRVRIVSRYFQN 300

Query: 301 SEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKR 360
           SEKNPEVEIEVSPSLQNSKT QQGER+VSRFFQKSEEQEVVNNQQEV Q PSQCAKSVKR
Sbjct: 301 SEKNPEVEIEVSPSLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAKSVKR 360

Query: 361 IRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPW 420
           IRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYDPW
Sbjct: 361 IRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYDPW 420

Query: 421 RVLVICMLLNRTTGQ 432
           RVLVICMLLNRTTGQ
Sbjct: 421 RVLVICMLLNRTTGQ 428

[Close]

BLAST of Csor.00g074410 vs. NCBI nr
Match: XP_022969561.1 (methyl-CpG-binding domain protein 4-like protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 647 bits (1668), Expect = 3.58e-231
Identity = 344/370 (92.97%), Postives = 351/370 (94.86%), Query Frame = 0


Query: 65  MAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEVSPKT 124
           MA NSPISTLEVLQTSEANHQKTAA HEIPILCIE LQDDPKREISTLT+EDVQEVSPKT
Sbjct: 1   MALNSPISTLEVLQTSEANHQKTAAGHEIPILCIEYLQDDPKREISTLTVEDVQEVSPKT 60

Query: 125 PTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQKTPPP 184
           PTSERERV AHEPPILTLEDLQNAKSDHQPA+KPPLARRVLRF RQFGFDEQIVQKTPP 
Sbjct: 61  PTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFCRQFGFDEQIVQKTPPS 120

Query: 185 VRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED--VNATDQPI 244
           VRNSMPVQ DERVVSRHFQESKS QQGERIVSRYFQHSEIE+A+HNEDED  VN TDQP 
Sbjct: 121 VRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDDDVNVTDQPF 180

Query: 245 KRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEKNP 304
           KRS VG+YRKRRRKDVA SSDNSKAYQRSIRKSSRS+KKSGTDKRVRIVSRYFQNSEKNP
Sbjct: 181 KRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRSIKKSGTDKRVRIVSRYFQNSEKNP 240

Query: 305 EVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRKPA 364
           EVEIEVSPSLQNSKTNQQ ERVVSRFFQKSEE EVVNNQQEV Q PSQCAKSVKRIRKPA
Sbjct: 241 EVEIEVSPSLQNSKTNQQEERVVSRFFQKSEEHEVVNNQQEVIQLPSQCAKSVKRIRKPA 300

Query: 365 KERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVI 424
           KERKVRDKVSA+PRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYDPWRVLVI
Sbjct: 301 KERKVRDKVSAKPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYDPWRVLVI 360

Query: 425 CMLLNRTTGQ 432
           CMLLNRTTGQ
Sbjct: 361 CMLLNRTTGQ 370

[Close]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL
Match: A0A6J1EZJ4 (methyl-CpG-binding domain protein 4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437878 PE=4 SV=1)

HSP 1 Score: 754 bits (1946), Expect = 2.82e-271
Identity = 399/437 (91.30%), Postives = 412/437 (94.28%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSS-FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ 60
           MTATTIMNPN SPPSSS FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ
Sbjct: 1   MTATTIMNPNLSPPSSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ 60

Query: 61  KRSSLMAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQE 120
           KR++LMAQNSPISTLEVLQTSE+NHQKTAA  EIPILCIEDLQD+PKR  STLT+EDVQE
Sbjct: 61  KRTTLMAQNSPISTLEVLQTSESNHQKTAAGQEIPILCIEDLQDNPKRGSSTLTVEDVQE 120

Query: 121 VSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQ 180
           VSPKTPTSERERV  HEPPILTLED+QNAKSDHQPA++PPLARRVLRFYRQFGFDEQIVQ
Sbjct: 121 VSPKTPTSERERVLVHEPPILTLEDIQNAKSDHQPAIEPPLARRVLRFYRQFGFDEQIVQ 180

Query: 181 KTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED----V 240
           KTPP VRNSMPVQ DERVVSRHFQESKS QQGERIVSRYFQHSEIE+A+HNEDED    V
Sbjct: 181 KTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDEDEDV 240

Query: 241 NATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYF 300
           N TDQPIKRS VG+YRKRRRKDVA SSDNSKAYQRSIRKSSR VK+SGTDKRVR VSRYF
Sbjct: 241 NVTDQPIKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRFVKESGTDKRVRFVSRYF 300

Query: 301 QNSEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSV 360
           QNSEKNPEVEIEVSP LQNSKT QQGER+VSRFFQKSEEQEVVNNQQEV Q PSQCAKSV
Sbjct: 301 QNSEKNPEVEIEVSPPLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAKSV 360

Query: 361 KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYD 420
           KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYD
Sbjct: 361 KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYD 420

Query: 421 PWRVLVICMLLNRTTGQ 432
           PWRVLVICMLLNRTTGQ
Sbjct: 421 PWRVLVICMLLNRTTGQ 437

[Close]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL
Match: A0A6J1HY54 (methyl-CpG-binding domain protein 4-like protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468538 PE=4 SV=1)

HSP 1 Score: 647 bits (1668), Expect = 1.73e-231
Identity = 344/370 (92.97%), Postives = 351/370 (94.86%), Query Frame = 0


Query: 65  MAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEVSPKT 124
           MA NSPISTLEVLQTSEANHQKTAA HEIPILCIE LQDDPKREISTLT+EDVQEVSPKT
Sbjct: 1   MALNSPISTLEVLQTSEANHQKTAAGHEIPILCIEYLQDDPKREISTLTVEDVQEVSPKT 60

Query: 125 PTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQKTPPP 184
           PTSERERV AHEPPILTLEDLQNAKSDHQPA+KPPLARRVLRF RQFGFDEQIVQKTPP 
Sbjct: 61  PTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFCRQFGFDEQIVQKTPPS 120

Query: 185 VRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED--VNATDQPI 244
           VRNSMPVQ DERVVSRHFQESKS QQGERIVSRYFQHSEIE+A+HNEDED  VN TDQP 
Sbjct: 121 VRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDDDVNVTDQPF 180

Query: 245 KRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEKNP 304
           KRS VG+YRKRRRKDVA SSDNSKAYQRSIRKSSRS+KKSGTDKRVRIVSRYFQNSEKNP
Sbjct: 181 KRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRSIKKSGTDKRVRIVSRYFQNSEKNP 240

Query: 305 EVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRKPA 364
           EVEIEVSPSLQNSKTNQQ ERVVSRFFQKSEE EVVNNQQEV Q PSQCAKSVKRIRKPA
Sbjct: 241 EVEIEVSPSLQNSKTNQQEERVVSRFFQKSEEHEVVNNQQEVIQLPSQCAKSVKRIRKPA 300

Query: 365 KERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVI 424
           KERKVRDKVSA+PRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYDPWRVLVI
Sbjct: 301 KERKVRDKVSAKPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYDPWRVLVI 360

Query: 425 CMLLNRTTGQ 432
           CMLLNRTTGQ
Sbjct: 361 CMLLNRTTGQ 370

[Close]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL
Match: A0A6J1HWM5 (methyl-CpG-binding domain protein 4-like protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468538 PE=4 SV=1)

HSP 1 Score: 647 bits (1668), Expect = 4.89e-230
Identity = 344/370 (92.97%), Postives = 351/370 (94.86%), Query Frame = 0


Query: 65  MAQNSPISTLEVLQTSEANHQKTAAWHEIPILCIEDLQDDPKREISTLTIEDVQEVSPKT 124
           MA NSPISTLEVLQTSEANHQKTAA HEIPILCIE LQDDPKREISTLT+EDVQEVSPKT
Sbjct: 1   MALNSPISTLEVLQTSEANHQKTAAGHEIPILCIEYLQDDPKREISTLTVEDVQEVSPKT 60

Query: 125 PTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQKTPPP 184
           PTSERERV AHEPPILTLEDLQNAKSDHQPA+KPPLARRVLRF RQFGFDEQIVQKTPP 
Sbjct: 61  PTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFCRQFGFDEQIVQKTPPS 120

Query: 185 VRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDED--VNATDQPI 244
           VRNSMPVQ DERVVSRHFQESKS QQGERIVSRYFQHSEIE+A+HNEDED  VN TDQP 
Sbjct: 121 VRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDDDVNVTDQPF 180

Query: 245 KRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEKNP 304
           KRS VG+YRKRRRKDVA SSDNSKAYQRSIRKSSRS+KKSGTDKRVRIVSRYFQNSEKNP
Sbjct: 181 KRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRSIKKSGTDKRVRIVSRYFQNSEKNP 240

Query: 305 EVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRKPA 364
           EVEIEVSPSLQNSKTNQQ ERVVSRFFQKSEE EVVNNQQEV Q PSQCAKSVKRIRKPA
Sbjct: 241 EVEIEVSPSLQNSKTNQQEERVVSRFFQKSEEHEVVNNQQEVIQLPSQCAKSVKRIRKPA 300

Query: 365 KERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVI 424
           KERKVRDKVSA+PRTTLSADELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYDPWRVLVI
Sbjct: 301 KERKVRDKVSAKPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYDPWRVLVI 360

Query: 425 CMLLNRTTGQ 432
           CMLLNRTTGQ
Sbjct: 361 CMLLNRTTGQ 370

[Close]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL
Match: A0A1S3CCU6 (methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo OX=3656 GN=LOC103499353 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 3.82e-137
Identity = 260/439 (59.23%), Postives = 303/439 (69.02%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSS-FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTP-EDFT 60
           M ATT +NPN +PPSSS +P  LFS+F F+G S SRFRFPPSK    S  QNP P +D T
Sbjct: 1   MAATTSINPNLTPPSSSSYPHDLFSEFVFRGTSRSRFRFPPSK----SAHQNPNPYQDST 60

Query: 61  QKRSSLMAQNSPISTLEVLQTSEAN--HQKTAAWHEIPILCIEDLQDDPKREISTLTIED 120
           Q        +SPISTL  LQTSE N  H K+ A                           
Sbjct: 61  Q--------HSPISTLYDLQTSEPNNHHNKSLA--------------------------- 120

Query: 121 VQEVSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQ 180
                  +P+SE     A EPPILTLEDLQN K   Q   KP LARRVL FYR+FGFD++
Sbjct: 121 -------SPSSE-----ADEPPILTLEDLQNGKLPLQSPKKPSLARRVLSFYREFGFDKK 180

Query: 181 IVQKTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDE--D 240
           ++Q T   V NS PVQ   RVVSR+FQ S+STQQ ERIVSRYF+ S  E+A+H EDE  D
Sbjct: 181 LLQATSHSVLNSEPVQEGTRVVSRYFQNSRSTQQRERIVSRYFKKSVKERAAHYEDENDD 240

Query: 241 VNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRY 300
            N T+QP KRS      KRRRKDV PSS NSK    S+ K+SRSV+KS TD R RIVS Y
Sbjct: 241 GNLTEQPSKRSS-----KRRRKDVDPSSVNSKTNHHSMGKTSRSVQKSRTDTRARIVSGY 300

Query: 301 FQNSEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKS 360
           FQ SEK+ E++ EVSPSLQNSK+NQQ E++VSRFF KS +Q+ VNNQ+E T+Q +QCAKS
Sbjct: 301 FQYSEKSLEMDREVSPSLQNSKSNQQEEKMVSRFFLKSGKQQAVNNQEEATEQLNQCAKS 360

Query: 361 VKRIRKPAKERKVRDKVSA-RPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHA 420
           VKR+RKP  ERK ++K S+ +PRTTL+A ELFLEAYRRKSPDDTWKPPPSG RLLQ DHA
Sbjct: 361 VKRVRKPVNERKQKNKTSSTKPRTTLTAAELFLEAYRRKSPDDTWKPPPSGTRLLQHDHA 383

Query: 421 YDPWRVLVICMLLNRTTGQ 432
           YDPWRVLVICMLLNRT+G+
Sbjct: 421 YDPWRVLVICMLLNRTSGR 383

[Close]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL
Match: A0A5D3CU57 (Methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00130 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 3.95e-137
Identity = 260/439 (59.23%), Postives = 303/439 (69.02%), Query Frame = 0


Query: 1   MTATTIMNPNPSPPSSS-FPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTP-EDFT 60
           M ATT +NPN +PPSSS +P  LFS+F F+G S SRFRFPPSK    S  QNP P +D T
Sbjct: 1   MAATTSINPNLTPPSSSSYPHDLFSEFVFRGTSRSRFRFPPSK----SAHQNPNPYQDST 60

Query: 61  QKRSSLMAQNSPISTLEVLQTSEAN--HQKTAAWHEIPILCIEDLQDDPKREISTLTIED 120
           Q        +SPISTL  LQTSE N  H K+ A                           
Sbjct: 61  Q--------HSPISTLYDLQTSEPNNHHNKSLA--------------------------- 120

Query: 121 VQEVSPKTPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQ 180
                  +P+SE     A EPPILTLEDLQN K   Q   KP LARRVL FYR+FGFD++
Sbjct: 121 -------SPSSE-----ADEPPILTLEDLQNGKLPLQSPKKPSLARRVLSFYREFGFDKK 180

Query: 181 IVQKTPPPVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDE--D 240
           ++Q T   V NS PVQ   RVVSR+FQ S+STQQ ERIVSRYF+ S  E+A+H EDE  D
Sbjct: 181 LLQATSHSVLNSEPVQEGTRVVSRYFQNSRSTQQRERIVSRYFKKSVKERAAHYEDENDD 240

Query: 241 VNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRY 300
            N T+QP KRS      KRRRKDV PSS NSK    S+ K+SRSV+KS TD R RIVS Y
Sbjct: 241 GNLTEQPSKRSS-----KRRRKDVDPSSVNSKTNHHSMGKTSRSVQKSRTDTRARIVSGY 300

Query: 301 FQNSEKNPEVEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKS 360
           FQ SEK+ E++ EVSPSLQNSK+NQQ E++VSRFF KS +Q+ VNNQ+E T+Q +QCAKS
Sbjct: 301 FQYSEKSLEMDREVSPSLQNSKSNQQEEKMVSRFFLKSGKQQAVNNQEEATEQLNQCAKS 360

Query: 361 VKRIRKPAKERKVRDKVSA-RPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHA 420
           VKR+RKP  ERK ++K S+ +PRTTL+A ELFLEAYRRKSPDDTWKPPPSG RLLQ DHA
Sbjct: 361 VKRVRKPVNERKQKNKTSSTKPRTTLTAAELFLEAYRRKSPDDTWKPPPSGTRLLQHDHA 383

Query: 421 YDPWRVLVICMLLNRTTGQ 432
           YDPWRVLVICMLLNRT+G+
Sbjct: 421 YDPWRVLVICMLLNRTSGR 383

[Close]

BLAST of Csor.00g074410 vs. TAIR 10
Match: AT3G07930.3 (DNA glycosylase superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 75/232 (32.33%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 231 EDEDVNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIR--KSSRSVKKSGTDK-- 290
           +D+D + +D  I+R    E+    R+ V+P    S   Q+S     S     K G  K  
Sbjct: 123 DDDDDSVSDSHIERQECSEFHVEVRR-VSPYFQGSTVSQQSKEGCDSDSVCSKEGCSKVQ 182

Query: 291 -RVRIVSRYFQNSEKNPEVEIEVSPSLQNSKTNQQGE-------RVVSRFFQKSEEQEVV 350
            +V  VS YFQ S  + + + ++  S Q+ +  ++G        R VS +FQ+S      
Sbjct: 183 AKVPRVSPYFQASTIS-QCDSDIVSSSQSGRNYRKGSSKRQVKVRRVSPYFQES------ 242

Query: 351 NNQQEVTQQPSQCAKSVKRIRK-------------------PAKERKVRDKVSARPRTTL 410
                V++QP+Q  K ++   K                     K R VR      P   L
Sbjct: 243 ----TVSEQPNQAPKGLRNYFKVVKVSRYFHADGIQVNESQKEKSRNVRKTPIVSP--VL 302

Query: 411 SADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTTG 432
           S  +   + Y RK+PD+TW PP S   LLQ+DH +DPWRVLVICMLLN+T+G
Sbjct: 303 SLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSG 340

[Close]

BLAST of Csor.00g074410 vs. TAIR 10
Match: AT3G07930.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 75/232 (32.33%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 231 EDEDVNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIR--KSSRSVKKSGTDK-- 290
           +D+D + +D  I+R    E+    R+ V+P    S   Q+S     S     K G  K  
Sbjct: 123 DDDDDSVSDSHIERQECSEFHVEVRR-VSPYFQGSTVSQQSKEGCDSDSVCSKEGCSKVQ 182

Query: 291 -RVRIVSRYFQNSEKNPEVEIEVSPSLQNSKTNQQGE-------RVVSRFFQKSEEQEVV 350
            +V  VS YFQ S  + + + ++  S Q+ +  ++G        R VS +FQ+S      
Sbjct: 183 AKVPRVSPYFQASTIS-QCDSDIVSSSQSGRNYRKGSSKRQVKVRRVSPYFQES------ 242

Query: 351 NNQQEVTQQPSQCAKSVKRIRK-------------------PAKERKVRDKVSARPRTTL 410
                V++QP+Q  K ++   K                     K R VR      P   L
Sbjct: 243 ----TVSEQPNQAPKGLRNYFKVVKVSRYFHADGIQVNESQKEKSRNVRKTPIVSP--VL 302

Query: 411 SADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTTG 432
           S  +   + Y RK+PD+TW PP S   LLQ+DH +DPWRVLVICMLLN+T+G
Sbjct: 303 SLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSG 340

[Close]

BLAST of Csor.00g074410 vs. TAIR 10
Match: AT3G07930.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 7.7e-13
Identity = 74/231 (32.03%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 231 EDEDVNATDQPIKRSGVGEYRKRRRKDVAPSSDNSKAYQRSIR--KSSRSVKKSGTDK-- 290
           +D+D + +D  I+R    E+    R+ V+P    S   Q+S     S     K G  K  
Sbjct: 123 DDDDDSVSDSHIERQECSEFHVEVRR-VSPYFQGSTVSQQSKEGCDSDSVCSKEGCSKVQ 182

Query: 291 -RVRIVSRYFQNSEKNPEVEIEVSPSLQNSKTNQQGE-------RVVSRFFQKSEEQEVV 350
            +V  VS YFQ S  + + + ++  S Q+ +  ++G        R VS +FQ+S      
Sbjct: 183 AKVPRVSPYFQASTIS-QCDSDIVSSSQSGRNYRKGSSKRQVKVRRVSPYFQES------ 242

Query: 351 NNQQEVTQQPSQCAKSVKRIRK-------------------PAKERKVRDKVSARPRTTL 410
                V++QP+Q  K ++   K                     K R VR      P   L
Sbjct: 243 ----TVSEQPNQAPKGLRNYFKVVKVSRYFHADGIQVNESQKEKSRNVRKTPIVSP--VL 302

Query: 411 SADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTT 431
           S  +   + Y RK+PD+TW PP S   LLQ+DH +DPWRVLVICMLLN+T+
Sbjct: 303 SLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTS 339

The following BLAST results are available for this feature:

BLAST of Csor.00g074410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGK1	1.7e-12	32.33	Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Csor.00g074410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588518.1	5.95e-304	100.00	Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperm...	[more]
KAG7022375.1	8.52e-302	100.00	Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022931728.1	5.83e-271	91.30	methyl-CpG-binding domain protein 4-like protein [Cucurbita moschata]	[more]
XP_023529473.1	1.40e-262	90.57	methyl-CpG-binding domain protein 4-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022969561.1	3.58e-231	92.97	methyl-CpG-binding domain protein 4-like protein isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g074410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZJ4	2.82e-271	91.30	methyl-CpG-binding domain protein 4-like protein OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1HY54	1.73e-231	92.97	methyl-CpG-binding domain protein 4-like protein isoform X2 OS=Cucurbita maxima ...	[more]
A0A6J1HWM5	4.89e-230	92.97	methyl-CpG-binding domain protein 4-like protein isoform X1 OS=Cucurbita maxima ...	[more]
A0A1S3CCU6	3.82e-137	59.23	methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3CU57	3.95e-137	59.23	Methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Csor.00g074410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07930.3	1.2e-13	32.33	DNA glycosylase superfamily protein	[more]
AT3G07930.2	1.2e-13	32.33	DNA glycosylase superfamily protein	[more]
AT3G07930.1	7.7e-13	32.03	DNA glycosylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 387..433 e-value: 1.1E-7 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..63
None	No IPR available	PANTHER	PTHR15074:SF0	METHYL-CPG-BINDING DOMAIN PROTEIN 4-RELATED	coord: 178..432
IPR045138	Methyl-CpG binding protein MeCP2/MBD4	PANTHER	PTHR15074	METHYL-CPG-BINDING PROTEIN	coord: 178..432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g074410.m01	Csor.00g074410.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding