Csor.00g073500 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g073500
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr02: 4188037 .. 4188980 (+)
RNA-Seq Expression	Csor.00g073500
Synteny	Csor.00g073500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAGCCGCGGCGAAATGATAATCTGAGCCCATTTCAAGCGTGGAGGAGCGCCGTCGAGTGCATGTTCAATGTAAACCTTTTCCTAATTTATTTTTCCCACTCTAAAATTTGTATTTATTTAATATATGATTCTCCGTTCATGATACGAGGAGAACAAAACATTCCTTGTAAAGGTGTGAAAACTTTTCACTGTATCTTAGTAGACACTAAGCTCAAAAGTGAAAGGTCAAAACGTTCCTTATAAGGGTGTGAAAGTCTATCCCTACCTCCTTATAAGTATGTGGATAAGACGAGGGAAAGCTCAAAGACGACAATATTGATTAACGGTAGACTTAAAAGTATTACATCTTACTCTTAATTAGTTAATATGAGACTGCTCGTCACAGTAATCCTCGACAATGAACAAATTACCCCATTTTTTATACCGATGAAATTGAATTCTAGAGTAAAGATAGAGTCTTGAAAACGAAGTCTTGTTCGAGTTTAATGAGATCGTGACCTCGGGGTGTGTAGAAATCAATAGCGTGCACGGAGCAGCAGCAAATATGGCTGAACATAACGATAGAGGTGGCCGAAGAAGACATGAGAGGTTACTGTAGAGGAGGGTGTTTGGAGCACACGATGGACGTGCTAGACTGCATCGACGACGTGAAGAGGGACTTTTGGTTCGCTAATAACTTCGATACACGGACCCTTCGTAGCTTCCTCAATGAACGATGCTCCAATTCAACAGGTACTCGACCCTAATGACCAATCTTCCGTACCGCTCTCTTACTCTCTCTATACTATTTTACAACCCCGAAATGTGCAGGCTTTTCATACAAGGATGTGCCCACCACCACCAGCGGCGGCGGCGCAATTCAAGTCCCAAACAACATGGTTTTGTCCGTCATCATTCCCGTTTTGGCCTCAATTTTATCGTATAATTATTATTTTTAA

mRNA sequence

ATGACGGAGCCGCGGCGAAATGATAATCTGAGCCCATTTCAAGCGTGGAGGAGCGCCGTCGAGTGCATGTTCAATAAATCAATAGCGTGCACGGAGCAGCAGCAAATATGGCTGAACATAACGATAGAGGTGGCCGAAGAAGACATGAGAGGTTACTGTAGAGGAGGGTGTTTGGAGCACACGATGGACGTGCTAGACTGCATCGACGACGTGAAGAGGGACTTTTGGTTCGCTAATAACTTCGATACACGGACCCTTCGTAGCTTCCTCAATGAACGATGCTCCAATTCAACAGGCTTTTCATACAAGGATGTGCCCACCACCACCAGCGGCGGCGGCGCAATTCAAGTCCCAAACAACATGGTTTTGTCCGTCATCATTCCCGTTTTGGCCTCAATTTTATCGTATAATTATTATTTTTAA

Coding sequence (CDS)

ATGACGGAGCCGCGGCGAAATGATAATCTGAGCCCATTTCAAGCGTGGAGGAGCGCCGTCGAGTGCATGTTCAATAAATCAATAGCGTGCACGGAGCAGCAGCAAATATGGCTGAACATAACGATAGAGGTGGCCGAAGAAGACATGAGAGGTTACTGTAGAGGAGGGTGTTTGGAGCACACGATGGACGTGCTAGACTGCATCGACGACGTGAAGAGGGACTTTTGGTTCGCTAATAACTTCGATACACGGACCCTTCGTAGCTTCCTCAATGAACGATGCTCCAATTCAACAGGCTTTTCATACAAGGATGTGCCCACCACCACCAGCGGCGGCGGCGCAATTCAAGTCCCAAACAACATGGTTTTGTCCGTCATCATTCCCGTTTTGGCCTCAATTTTATCGTATAATTATTATTTTTAA

Protein sequence

MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEHTMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNNMVLSVIIPVLASILSYNYYF

Homology

[Close]

BLAST of Csor.00g073500 vs. NCBI nr
Match: KAG6605365.1 (hypothetical protein SDJN03_02682, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (751), Expect = 2.38e-100
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60
           MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH
Sbjct: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60

Query: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN 120
           TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN
Sbjct: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN 120

Query: 121 MVLSVIIPVLASILSYNYYF 140
           MVLSVIIPVLASILSYNYYF
Sbjct: 121 MVLSVIIPVLASILSYNYYF 140

[Close]

BLAST of Csor.00g073500 vs. NCBI nr
Match: XP_022947822.1 (uncharacterized protein LOC111451583 [Cucurbita moschata])

HSP 1 Score: 291 bits (746), Expect = 9.45e-99
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60
           MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH
Sbjct: 57  MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 116

Query: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN 120
           TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGG IQVPNN
Sbjct: 117 TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGPIQVPNN 176

Query: 121 MVLSVIIPVLASILSYNYYF 140
           MVLSVIIPVLASILSYNYYF
Sbjct: 177 MVLSVIIPVLASILSYNYYF 196

[Close]

BLAST of Csor.00g073500 vs. NCBI nr
Match: XP_023006814.1 (uncharacterized protein LOC111499484 [Cucurbita maxima])

HSP 1 Score: 268 bits (685), Expect = 3.07e-90
Identity = 130/143 (90.91%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60
           MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLN+TIEVA+EDMRGYC GGCLEH
Sbjct: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNLTIEVAKEDMRGYCGGGCLEH 60

Query: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGG---AIQV 120
           TMDVLDCIDDVKRDFWFANNFDT TLRSFLNERCSNST FSYKDVPTTT+ GG   A QV
Sbjct: 61  TMDVLDCIDDVKRDFWFANNFDTPTLRSFLNERCSNSTAFSYKDVPTTTTSGGGRGAFQV 120

Query: 121 PNNMVLSVIIPVLASILSYNYYF 140
            NNMVLSVIIPVLASILSYNYY+
Sbjct: 121 LNNMVLSVIIPVLASILSYNYYY 143

[Close]

BLAST of Csor.00g073500 vs. NCBI nr
Match: KAF5446567.1 (hypothetical protein F2P56_032184 [Juglans regia])

HSP 1 Score: 100 bits (250), Expect = 3.88e-24
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 2   TEPRRNDNLSPFQAWRSAVECM-FNKSIACTEQQQIWLNITIEVAEEDMRGYC-RGGCLE 61
           TEPR N NL P Q WRSA  CM +N+S +C ++ Q+     ++V++E++  YC +GGC E
Sbjct: 26  TEPRSNVNLGPIQGWRSAYFCMMYNESASCLKKDQLSDTGVVDVSKEEVEKYCSKGGCRE 85

Query: 62  HTMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKD 104
           H   VL CI DVKRDFWFANN   R L   +++ C+ +   S K+
Sbjct: 86  HIGYVLKCIHDVKRDFWFANNITVRLLNESISDGCAKNEAISTKN 130

[Close]

BLAST of Csor.00g073500 vs. NCBI nr
Match: KAF9670964.1 (hypothetical protein SADUNF_Sadunf13G0123800 [Salix dunnii])

HSP 1 Score: 100 bits (250), Expect = 9.60e-24
Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 2   TEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCR-GGCLEH 61
           ++P +N NLSPF  WRSA ECM N+S  C    QI L+  + V++ ++  YC+ GGC+EH
Sbjct: 39  SQPLKNVNLSPFWQWRSAYECMSNESARCAANYQIKLSGAVVVSQSEVVEYCKQGGCVEH 98

Query: 62  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN 121
              VL CI +VKRDFWFAN      L   +++ C+  +GF+     TT       + P  
Sbjct: 99  VYYVLKCIHNVKRDFWFANKATVLDLNRTISQACATKSGFN-----TTIFTSSGTKTPEK 158

Query: 122 MVLSVIIPVLA 131
           + +S++  +LA
Sbjct: 159 VYMSLLSSLLA 164

[Close]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL
Match: A0A6J1G7H5 (uncharacterized protein LOC111451583 OS=Cucurbita moschata OX=3662 GN=LOC111451583 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 4.58e-99
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60
           MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH
Sbjct: 57  MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 116

Query: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGAIQVPNN 120
           TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGG IQVPNN
Sbjct: 117 TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGGPIQVPNN 176

Query: 121 MVLSVIIPVLASILSYNYYF 140
           MVLSVIIPVLASILSYNYYF
Sbjct: 177 MVLSVIIPVLASILSYNYYF 196

[Close]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL
Match: A0A6J1L378 (uncharacterized protein LOC111499484 OS=Cucurbita maxima OX=3661 GN=LOC111499484 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 1.49e-90
Identity = 130/143 (90.91%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCRGGCLEH 60
           MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLN+TIEVA+EDMRGYC GGCLEH
Sbjct: 1   MTEPRRNDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNLTIEVAKEDMRGYCGGGCLEH 60

Query: 61  TMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTSGGG---AIQV 120
           TMDVLDCIDDVKRDFWFANNFDT TLRSFLNERCSNST FSYKDVPTTT+ GG   A QV
Sbjct: 61  TMDVLDCIDDVKRDFWFANNFDTPTLRSFLNERCSNSTAFSYKDVPTTTTSGGGRGAFQV 120

Query: 121 PNNMVLSVIIPVLASILSYNYYF 140
            NNMVLSVIIPVLASILSYNYY+
Sbjct: 121 LNNMVLSVIIPVLASILSYNYYY 143

[Close]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL
Match: A0A2H5QEA9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_221910 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.53e-22
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 7   NDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCR-GGCLEHTMDVL 66
           N NLSPF+AWRSA EC+F  +  C+ + ++ ++  I V  E+ + YCR GGC EH  +VL
Sbjct: 31  NVNLSPFRAWRSAYECLFYGASPCSAKDKLTMDGAINVPVEETKDYCREGGCGEHIQNVL 90

Query: 67  DCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTS 110
            CI  VKRDFWFAN    + L+  ++  C+ ST  +  D P + +
Sbjct: 91  KCIHQVKRDFWFANKAPVKFLQDAISTGCNTSTEINTTDYPRSNA 135

[Close]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL
Match: G7K0U6 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11433618 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.87e-22
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 3   EPRRNDNLSPFQAWRSAVECMFNKSIAC---TEQQQIWLNITIEVAEEDMRGYCRGGCLE 62
           +PRR+ NLSPF +WRSA  CM N S  C   +    I +N T+ V + D+  +C GGC +
Sbjct: 36  QPRRHVNLSPFDSWRSAYYCMMNHSNTCNLKSNNYTININGTLNVQDSDIHDFCTGGCYD 95

Query: 63  HTMDVLDCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGF---SYKDVPTTTSGGGAIQ 118
           HT+ V  CI DVKRDF FA       +++     C+   GF   +YKD  + TS  G + 
Sbjct: 96  HTLLVFKCIQDVKRDFHFATKAHISFVKNITMNACNELKGFDLLNYKDPNSATSLYGRMY 155

[Close]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL
Match: V4SWX3 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003504mg PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.65e-22
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 7   NDNLSPFQAWRSAVECMFNKSIACTEQQQIWLNITIEVAEEDMRGYCR-GGCLEHTMDVL 66
           N NLSPF+AWRSA EC+F  +  C+ + ++ ++  I V  E+ + YCR GGC EH  +VL
Sbjct: 31  NVNLSPFRAWRSAYECLFYGANPCSAKDKLTMDGAINVPVEETKDYCREGGCGEHIQNVL 90

Query: 67  DCIDDVKRDFWFANNFDTRTLRSFLNERCSNSTGFSYKDVPTTTS 110
            CI  VKRDFWFAN    + L+  ++  C+ ST  +  D P + +
Sbjct: 91  KCIHLVKRDFWFANKAPVKFLQDAISTGCNTSTEINTTDYPISNA 135

The following BLAST results are available for this feature:

BLAST of Csor.00g073500 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g073500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605365.1	2.38e-100	100.00	hypothetical protein SDJN03_02682, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022947822.1	9.45e-99	99.29	uncharacterized protein LOC111451583 [Cucurbita moschata]	[more]
XP_023006814.1	3.07e-90	90.91	uncharacterized protein LOC111499484 [Cucurbita maxima]	[more]
KAF5446567.1	3.88e-24	45.71	hypothetical protein F2P56_032184 [Juglans regia]	[more]
KAF9670964.1	9.60e-24	38.93	hypothetical protein SADUNF_Sadunf13G0123800 [Salix dunnii]	[more]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7H5	4.58e-99	99.29	uncharacterized protein LOC111451583 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1L378	1.49e-90	90.91	uncharacterized protein LOC111499484 OS=Cucurbita maxima OX=3661 GN=LOC111499484...	[more]
A0A2H5QEA9	1.53e-22	42.86	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_221910 PE=4 SV=1	[more]
G7K0U6	5.87e-22	40.16	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11433618 PE=4 SV=1	[more]
V4SWX3	8.65e-22	42.86	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003504mg PE=4 ...	[more]

BLAST of Csor.00g073500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34366	OS07G0289901 PROTEIN-RELATED	coord: 2..126
None	No IPR available	PANTHER	PTHR34366:SF7	SUBFAMILY NOT NAMED	coord: 2..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g073500.m01	Csor.00g073500.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane