Csor.00g072990 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g072990
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	VQ domain-containing protein
Location	Csor_Chr02: 3791534 .. 3792181 (-)
RNA-Seq Expression	Csor.00g072990
Synteny	Csor.00g072990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTAAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

mRNA sequence

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTAAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

Coding sequence (CDS)

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTAAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

Protein sequence

MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF

Homology

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BLAST of Csor.00g072990 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 94/236 (39.83%), Postives = 134/236 (56.78%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTP--RKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLP 60
           M+P    AGG+P+    +K+++Q+ GPRP  L V+++S KIKKPP HP P P   +P  P
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQP--P 60

Query: 61  PAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAA---SSTDGDLSPAARFATI 120
           P   +  +P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR A+ 
Sbjct: 61  PYIPR--EPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIE 180
           E ASPR  +E   R+  ++++  M+  E     G  PGILSP+PA L   S+G FSP   
Sbjct: 121 ENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFSP--- 180

Query: 181 PQSFTYSLIHELSPHWPS-PSALF-PAPLVSPISSP------------NIFNHLFD 215
                  + H+     P+ P  LF PA  +SP  SP            + F+H++D
Sbjct: 181 -------MYHQGGMFSPAIPLGLFSPAGFMSPFRSPGFTSLVASPTFADFFSHIWD 220

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BLAST of Csor.00g072990 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-12
Identity = 74/195 (37.95%), Postives = 96/195 (49.23%), Query Frame = 0


Query: 24  GPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P  +   P P+ IY ++P+++H
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTG-------LSSAASSTD-------------GDLSPAARFATIEKAS 143
              NNFM++VQRLTG        SS++SST              G +SPAARFA  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTEVPVE-------LGQNPGILSPAPASLAPISSGFFS 182
             +E       E  +D        E P +          + GILSP P SL  +S  FFS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

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BLAST of Csor.00g072990 vs. NCBI nr
Match: KAG6605314.1 (Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1064), Expect = 1.32e-145
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215

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BLAST of Csor.00g072990 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 405 bits (1042), Expect = 2.78e-142
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RSERERE--IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Csor.00g072990 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400 bits (1027), Expect = 5.38e-140
Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNP GSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSS +SSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RSERERE--IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Csor.00g072990 vs. NCBI nr
Match: XP_023007245.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 394 bits (1013), Expect = 6.83e-138
Identity = 207/215 (96.28%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSA+SS DGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERE    IDVSDMMDLTEVPVELGQ PGILSPAPASLAPISSGFFSP IEPQSFTYSL
Sbjct: 121 RSERE----IDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

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BLAST of Csor.00g072990 vs. NCBI nr
Match: XP_038901805.1 (protein MKS1-like [Benincasa hispida])

HSP 1 Score: 352 bits (904), Expect = 3.22e-121
Identity = 188/217 (86.64%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPVPPGGRPPLPPG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSS--AASSTDGDLSPAARFATIEKA 120
            +QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS  AA++TDGDLSPAAR ATIEKA
Sbjct: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSSAAAATDGDLSPAARLATIEKA 120

Query: 121 SPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTY 180
           SPRSERERE  I+VSDMMDL EV VELGQ PGILSPAPA+LAPI +G+FSPAIE QS  Y
Sbjct: 121 SPRSERERE--INVSDMMDLAEVSVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAY 180

Query: 181 SLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           SLIHELSPHWPSPSALF APLVSPISSPNIFN+LFDF
Sbjct: 181 SLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 215

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BLAST of Csor.00g072990 vs. ExPASy TrEMBL
Match: A0A6J1G715 (protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 1.35e-142
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RSERERE--IDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

[Close]

BLAST of Csor.00g072990 vs. ExPASy TrEMBL
Match: A0A6J1L2G0 (protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 3.31e-138
Identity = 207/215 (96.28%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSA+SS DGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERE    IDVSDMMDLTEVPVELGQ PGILSPAPASLAPISSGFFSP IEPQSFTYSL
Sbjct: 121 RSERE----IDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

[Close]

BLAST of Csor.00g072990 vs. ExPASy TrEMBL
Match: A0A5A7TBE4 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00750 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 9.43e-120
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAV-TDGDLSPAARLATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  I+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL
Sbjct: 121 RSERERE--INVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
            HELSPHWPSPSALF  PL+SPISSPNIFN+LFDF
Sbjct: 181 FHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of Csor.00g072990 vs. ExPASy TrEMBL
Match: A0A1S3CD17 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 9.43e-120
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAV-TDGDLSPAARLATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  I+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL
Sbjct: 121 RSERERE--INVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215
            HELSPHWPSPSALF  PL+SPISSPNIFN+LFDF
Sbjct: 181 FHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of Csor.00g072990 vs. ExPASy TrEMBL
Match: A0A0A0LK21 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 1.49e-116
Identity = 181/214 (84.58%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+P  GRPPLPP 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAV-TDGDLSPAARLATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RSERERE  I+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL
Sbjct: 121 RSERERE--INVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 214
            HELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 FHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of Csor.00g072990 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 94/236 (39.83%), Postives = 134/236 (56.78%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTP--RKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLP 60
           M+P    AGG+P+    +K+++Q+ GPRP  L V+++S KIKKPP HP P P   +P  P
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQP--P 60

Query: 61  PAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAA---SSTDGDLSPAARFATI 120
           P   +  +P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR A+ 
Sbjct: 61  PYIPR--EPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIE 180
           E ASPR  +E   R+  ++++  M+  E     G  PGILSP+PA L   S+G FSP   
Sbjct: 121 ENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFSP--- 180

Query: 181 PQSFTYSLIHELSPHWPS-PSALF-PAPLVSPISSP------------NIFNHLFD 215
                  + H+     P+ P  LF PA  +SP  SP            + F+H++D
Sbjct: 181 -------MYHQGGMFSPAIPLGLFSPAGFMSPFRSPGFTSLVASPTFADFFSHIWD 220

[Close]

BLAST of Csor.00g072990 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15
Identity = 87/244 (35.66%), Postives = 116/244 (47.54%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PPHPQP PP      P  +   P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVI 64

Query: 74  IYDISPKVLHVAENNFMSVVQRLTG-------LSSAASSTD-------------GDLSPA 133
           IY +SP+++H   NNFM++VQRLTG        SS +SST              G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISPA 124

Query: 134 ARFATIEKASPRSE-----------------REREREIDVSDMMDLTEVPVELGQNPGIL 193
           ARFA  EKA+  +E                        +        E P     + GIL
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQGFERP--SFHHAGIL 184

Query: 194 SPAPASLAPISSGFFSP--AIEPQSFTYSLIHELSPHWPSPSALFPAPLVSPISSPNIFN 215
           SP P SL  +S  FFS     +PQ F+ S  ++ +    S     P+ + SP SS ++FN
Sbjct: 185 SPGPNSLPSVSPDFFSTIGPTDPQGFS-SFFNDFNSILQSS----PSKIQSP-SSMDLFN 238

[Close]

BLAST of Csor.00g072990 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-13
Identity = 74/195 (37.95%), Postives = 96/195 (49.23%), Query Frame = 0


Query: 24  GPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P  +   P P+ IY ++P+++H
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTG-------LSSAASSTD-------------GDLSPAARFATIEKAS 143
              NNFM++VQRLTG        SS++SST              G +SPAARFA  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTEVPVE-------LGQNPGILSPAPASLAPISSGFFS 182
             +E       E  +D        E P +          + GILSP P SL  +S  FFS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

[Close]

BLAST of Csor.00g072990 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 25  PRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLHVAENN 84
           P PP L+VN++S  IKK PP P     + +P           P+IIY  +P+++H    +
Sbjct: 41  PSPPTLKVNKDSHVIKK-PPSPSSFSSAAKP---------RHPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLSSAASSTDG 105
           FM++VQ+LTG++ +     G
Sbjct: 101 FMALVQKLTGMTHSDEDLGG 110

The following BLAST results are available for this feature:

BLAST of Csor.00g072990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	2.2e-26	39.83	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	2.4e-12	37.95	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of Csor.00g072990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605314.1	1.32e-145	100.00	Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Prot...	[more]
XP_022947651.1	2.78e-142	99.07	protein MKS1-like [Cucurbita moschata]	[more]
XP_023533977.1	5.38e-140	97.67	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007245.1	6.83e-138	96.28	protein MKS1-like [Cucurbita maxima]	[more]
XP_038901805.1	3.22e-121	86.64	protein MKS1-like [Benincasa hispida]	[more]

BLAST of Csor.00g072990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G715	1.35e-142	99.07	protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1	[more]
A0A6J1L2G0	3.31e-138	96.28	protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1	[more]
A0A5A7TBE4	9.43e-120	85.58	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00...	[more]
A0A1S3CD17	9.43e-120	85.58	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
A0A0A0LK21	1.49e-116	84.58	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=...	[more]

BLAST of Csor.00g072990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	1.6e-27	39.83	MAP kinase substrate 1	[more]
AT1G21326.1	2.4e-15	35.66	VQ motif-containing protein	[more]
AT1G21320.1	1.7e-13	37.95	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	1.1e-04	35.00	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 7.0E-10 score: 38.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR33143:SF50	PROTEIN MKS1	coord: 10..214
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 10..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g072990.m01	Csor.00g072990.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus