Csor.00g072660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTTGTCCTTCTACGTTGCTTCTCGAACACAGCTATAGGTATATTTCTTTATCTAATTAATTCATTACAATAAATTCAAAGGTTCGTTATTCATTAAAACAAATCAAGGAGCATTCTTTTTTAACACTAAAAATGTCACCATATTGAATTCTTAAGTACAAAGTTCGAATCGGGTCGTTTCATTTTTCAATCGAATCGTTGATTTGTTGTTGGCAGAAGCAAGAAGTTTGGGAGTGGGAGTGCCTCAGATTAAGAAGGATGATCATAGTTTGAAAGTAGATGGTGATCTTAATGTTGATGATGAAGAACATTTTATGAGCACTGTTGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTTGTCCTTCTACGTTGCTTCTCGAACACAGCTATAGAAGCAAGAAGTTTGGGAGTGGGAGTGCCTCAGATTAAGAAGGATGATCATAGTTTGAAAGTAGATGGTGATCTTAATGTTGATGATGAAGAACATTTTATGAGCACTGTTGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA ATGGCTCCATGCAAACGCCTCGTCCTCGTCCTCCTCGTCCTCCTTGTCCTTCTACGTTGCTTCTCGAACACAGCTATAGAAGCAAGAAGTTTGGGAGTGGGAGTGCCTCAGATTAAGAAGGATGATCATAGTTTGAAAGTAGATGGTGATCTTAATGTTGATGATGAAGAACATTTTATGAGCACTGTTGATTTGGTGGCTATGGATTATACTCAGGCTTCCAAGAAGCCTCCAATCCACAACTGA MAPCKRLVLVLLVLLVLLRCFSNTAIEARSLGVGVPQIKKDDHSLKVDGDLNVDDEEHFMSTVDLVAMDYTQASKKPPIHN Homology
BLAST of Csor.00g072660 vs. NCBI nr
Match: KAG6605281.1 (hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155 bits (391), Expect = 2.60e-47 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g072660 vs. NCBI nr
Match: KAG6571377.1 (hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.5 bits (210), Expect = 9.04e-20 Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Csor.00g072660 vs. NCBI nr
Match: KAA0045905.1 (Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa] >TYK13684.1 hypothetical protein E5676_scaffold299G002040 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 7.21e-17 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of Csor.00g072660 vs. NCBI nr
Match: KGN62102.1 (hypothetical protein Csa_006036 [Cucumis sativus]) HSP 1 Score: 73.2 bits (178), Expect = 9.18e-15 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Csor.00g072660 vs. NCBI nr
Match: KAA8546932.1 (hypothetical protein F0562_003361 [Nyssa sinensis]) HSP 1 Score: 47.4 bits (111), Expect = 9.32e-05 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0
BLAST of Csor.00g072660 vs. ExPASy TrEMBL
Match: A0A5A7TWX6 (Root meristem growth factor 9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002040 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.49e-17 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of Csor.00g072660 vs. ExPASy TrEMBL
Match: A0A0A0LMV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297260 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.44e-15 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Csor.00g072660 vs. ExPASy TrEMBL
Match: A0A5J5BZ75 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003361 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.51e-05 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0
BLAST of Csor.00g072660 vs. ExPASy TrEMBL
Match: A0A2N9HPW7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42164 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 6.83e-05 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Csor.00g072660 vs. ExPASy TrEMBL
Match: A0A498I047 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_039433 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 8.88e-05 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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