Csor.00g072460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g072460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Csor_Chr02: 3316745 .. 3318128 (-)
RNA-Seq Expression	Csor.00g072460
Synteny	Csor.00g072460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAACGAAAACTTGTAAGCAACCTAATCCAATCCACATTCTCTCTGATCTCTTCATTTTCTTATCAATTTCTTTTTTTTGCAGGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAACGCCACTCTCACCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCGTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAATCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTGCGTAAGGATCACACCAGAGCCTTCGATCGCCGCCCGCCGATTCTGCTTCCGAAGAGCGAGAACGAAGATGATGAGGACGACTCTGTTGTTGTGTTAAACGACGCCGTTTCGAGGAAGAGGAAAAGAGAAAAAGATCACGAAGCTGCTTTTTGTTCCCTACGCGAGATGAAGAAGATGATGAGGACGAACATGAAGATAAAGCATCAACGATTCACTACACCTCAACGATTCAGCGATGATGAAGAAGAAGACGAAGACGAAGACGAAGAAGAAGAAGACGAAGAAGACGACGAAGAAGAAGATTACTCGTGGAGACAGAGGAAGTACAGAGGATCAGGTTCGTTTGCAAAAACTCTATAAATTTCAATTTCAATTTCAATTTCAGCAAGCGGTACCAAAATTGGATGAATTCTCACCGATTTCAGCGCGTAATCAAGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGAGCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGGTAAGAAGAAAACAGCGAAATGAAATGATTCTCAATTGAAACAGTGATTGAACAATGATTTCTGAAATGCGTAGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCTAACTGA

mRNA sequence

ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAACGAAAACTTGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAACGCCACTCTCACCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCGTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAATCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTGCGTAAGGATCACACCAGAGCCTTCGATCGCCGCCCGCCGATTCTGCTTCCGAAGAGCGAGAACGAAGATGATGAGGACGACTCTGTTGTTGTGTTAAACGACGCCGTTTCGAGGAAGAGGAAAAGAGAAAAAGATCACGAAGCTGCTTTTTGTTCCCTACGCGAGATGAAGAAGATGATGAGGACGAACATGAAGATAAAGCATCAACGATTCACTACACCTCAACGATTCAGCGATGATGAAGAAGAAGACGAAGACGAAGACGAAGAAGAAGAAGACGAAGAAGACGACGAAGAAGAAGATTACTCGTGGAGACAGAGGAAGTACAGAGGATCAGCGCGTAATCAAGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGAGCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCTAACTGA

Coding sequence (CDS)

ATGGCTTTCTTCACTTCACCGATTCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATCGAACGAAAACTTGATCTTCCAAACAAGTTTGTTATCAACAATCGCGCTTCTTTGCTACACAACAACGCCACTCTCACCCTTCCGGACGGCGCAAACTGGGAGGTCGAACTCAAGAAATCGGATGGCAAAGTATCGTTCGCAAGAGGCTGGCCGGAGTTCGTGGAGTTTTACAATGTGAAAGCTGGATATTTCGTGGTTTTCAGATTGGAAGGAAATCGGTGCTTCAATGTTCTCATTTTCGACTTGAGTGCTACGGAAATCGATTATCCGATCAAGCCGAGGATCTTCCGCCGGCTGCGTAAGGATCACACCAGAGCCTTCGATCGCCGCCCGCCGATTCTGCTTCCGAAGAGCGAGAACGAAGATGATGAGGACGACTCTGTTGTTGTGTTAAACGACGCCGTTTCGAGGAAGAGGAAAAGAGAAAAAGATCACGAAGCTGCTTTTTGTTCCCTACGCGAGATGAAGAAGATGATGAGGACGAACATGAAGATAAAGCATCAACGATTCACTACACCTCAACGATTCAGCGATGATGAAGAAGAAGACGAAGACGAAGACGAAGAAGAAGAAGACGAAGAAGACGACGAAGAAGAAGATTACTCGTGGAGACAGAGGAAGTACAGAGGATCAGCGCGTAATCAAGAAGACGGCGGCCGATTCAGTCCAGAATCGATGAGACCTATGCATCCTCCAAGGACGCCGAAGCCATTAACGGAGAATCAAGAGCGAGTTCTGAGAATAGCGAGTTCGTTCAAATTGAGGACGAAGAATCCTTCATTCATGGTAACGATGAGGCCTTCCTACATCCAAACAGGAAATTACCTGAGTTTGCCGAGAAGCTTTGCGGAGAGGTACCTGCAAGAATCGACGGACGTGAAGCTGGAAGTGGCGGACGGGAGGATTTGGAGCGTGTGGTGCGGTGTACGGTGGGCGTTTACGAGGCGGCGGACGGAGTTGAAATGCGGTTGGAAGAGATTCGCTGTGGATAATCAGTTGAAGGAAGGGGACGTGTGTGTGTTCGAATTGATGAACAGAATCCCCAAAGTGTTCTTCAAAGTCACTATTTTCCGGCGACCGGCTAACTGA

Protein sequence

MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN

Homology

[Close]

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.7e-27
Identity = 115/374 (30.75%), Postives = 176/374 (47.06%), Query Frame = 0


Query: 7   PIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKVS 66
           P P F K+I   T+ E++L +P+KFV   +   L     LT+PDG  W V L+K+D K+ 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDE-LSVAVALTVPDGHVWRVGLRKADNKIW 61

Query: 67  FARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRLRKDHTR 126
           F  GW EFV+ Y+++ GY ++FR EGN  F+V IF+LS +EI+Y     +      D   
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLM------DSAH 121

Query: 127 AFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMMRTNMKI 186
              +R  +     E+ +DE D+ V+   +V      E    A         + + T    
Sbjct: 122 NHFKRARLF----EDLEDE-DAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVK 181

Query: 187 KHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGGRFSPES 246
             +   TP+       + ++ D EE +     ++D   R + Y  ++             
Sbjct: 182 AEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESAS------------- 241

Query: 247 MRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAER 306
                  R      E +ER +  A +F+    NP F V +RPSY+  G  + LP  FAE+
Sbjct: 242 ------ARKRTVTAEERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEK 301

Query: 307 YLQE-STDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELM 366
           YL   S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+
Sbjct: 302 YLSGISGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL 336

Query: 367 NRIPKVFFKVTIFR 380
            R      KVT FR
Sbjct: 362 -RTRDFVLKVTAFR 336

[Close]

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 3.2e-15
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 8   IPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKVSF 67
           +  F KIIL   +IE+ + +P +FV       L +N TL  P G    + +K+   +V F
Sbjct: 31  VKKFIKIILLSRIIEKMMKVPARFV--RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWF 90

Query: 68  ARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRLRKDHTRA 127
            +GW EF E +++  G+F+ F  EG+ CF V+IFD+SA+EI+YP+          D T  
Sbjct: 91  EKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL----------DDTD- 150

Query: 128 FDRRPPILLPKSEN----EDDEDDSVVVLNDAVSRKRKRE 164
            D R  ++    +     E  +DD  VV  D + +K+K++
Sbjct: 151 -DNREEVMDDDEQGFTGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-13
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFV-KLQGSKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF++SA E  YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-13
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFV-KLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF+ SA E +YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot
Match: Q8S2E6 (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0723500 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.1e-07
Identity = 104/397 (26.20%), Postives = 163/397 (41.06%), Query Frame = 0


Query: 9   PHFFKIILHHTLIERKLDLPNKFV------INNRASLLHN---NATLTLPDGANWEVELK 68
           PHFFK+++     +++L +P  F        + +A  L      ATL  P G  W V ++
Sbjct: 19  PHFFKVLVGD--FKQRLKIPPNFCKHIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIR 78

Query: 69  KSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRR 128
           ++     F  GWP+FV+   ++   FVVFR +GN  F  ++FD +A E     +  +   
Sbjct: 79  RTAEGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFDRTACE-----REDLMGG 138

Query: 129 LRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKM 188
              D  R    RP       +    + DSV            +E     A  S  +  ++
Sbjct: 139 GGGDRPRKKRGRPRTAAASRDAARPKKDSV-----------GKEMVTYRASPSGGQPLQI 198

Query: 189 MRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDE-------------EDDEEEDYSWRQ 248
           + ++         TP+  S   + +ED DE    E             E   + D    +
Sbjct: 199 VDSSW--------TPEPGSTAVKNEEDADELPVCELPASSASPPRHVPEGALDADGGAAR 258

Query: 249 RKYRGSARNQEDGGRFS-PESMRPM--HPPRTPKPLTENQERVLRIASSFKLRTKNPSFM 308
           R    +   Q+D    S P S+R    +  R     T  ++R   IA +F  R+  P  +
Sbjct: 259 RGAAKTRSLQDDLALASIPPSIRRYKGYVSRRRAVATAERQRATEIAHAF--RSPLPYCV 318

Query: 309 VTMRPSYIQTGNYLSLPRSFAERYL-QESTDVKLEVADGRIWSVWCGVRWAFTRRRTELK 368
           + M   ++     +  P  F+ ++L +E TDV L    G++WSV           R  L 
Sbjct: 319 IRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSV-----LYIPNTRDRLS 378

Query: 369 CGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFR 380
            GW  FA  N L+EGD CVFEL   +    F+V IFR
Sbjct: 379 RGWCAFARGNCLEEGDYCVFEL---VAAAEFRVHIFR 379

[Close]

BLAST of Csor.00g072460 vs. NCBI nr
Match: KAG6605261.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 755 bits (1950), Expect = 5.17e-275
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK
Sbjct: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL
Sbjct: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGG 240
           RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGG
Sbjct: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGG 240

Query: 241 RFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLP 300
           RFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLP
Sbjct: 241 RFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLP 300

Query: 301 RSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVC 360
           RSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVC
Sbjct: 301 RSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVC 360

Query: 361 VFELMNRIPKVFFKVTIFRRPAN 383
           VFELMNRIPKVFFKVTIFRRPAN
Sbjct: 361 VFELMNRIPKVFFKVTIFRRPAN 383

[Close]

BLAST of Csor.00g072460 vs. NCBI nr
Match: XP_022947008.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 747 bits (1929), Expect = 3.70e-271
Identity = 382/388 (98.45%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 95

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 155

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 156 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 215

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDE-----EEEDEEDDEEEDYSWRQRKYRGSARN 240
           RTNMKIKHQRFTTPQRFSDDEEEDEDEDE     EEEDEEDDEEEDYSWRQRKYRGSARN
Sbjct: 216 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEEDEEDDEEEDYSWRQRKYRGSARN 275

Query: 241 QEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN 300
            EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN
Sbjct: 276 HEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN 335

Query: 301 YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK 360
           YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK
Sbjct: 336 YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK 395

Query: 361 EGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           EGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 EGDVCVFELMNRIPKVFFKVTIFRRPAN 423

[Close]

BLAST of Csor.00g072460 vs. NCBI nr
Match: XP_023007388.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 735 bits (1898), Expect = 2.03e-266
Identity = 375/389 (96.40%), Postives = 381/389 (97.94%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLP+KFVINNRASLLHNNATL+LPDGANWEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPSKFVINNRASLLHNNATLSLPDGANWEVELKK 95

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFV+FYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL
Sbjct: 96  SDGKVSFARGWPEFVQFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 155

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKDH RAFDRRPPILLPKSENEDDED+SVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 156 RKDHNRAFDRRPPILLPKSENEDDEDNSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 215

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDE------EEDYSWRQRKYRGSAR 240
           RTNMKIKHQRFTTPQRFSDDEEEDEDE+EEEEDEED+E      EEDYSWRQRKYRGSAR
Sbjct: 216 RTNMKIKHQRFTTPQRFSDDEEEDEDEEEEEEDEEDEEDEEDEEEEDYSWRQRKYRGSAR 275

Query: 241 NQEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG 300
           N EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG
Sbjct: 276 NHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG 335

Query: 301 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL 360
           NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL
Sbjct: 336 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL 395

Query: 361 KEGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           KEGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 KEGDVCVFELMNRIPKVFFKVTIFRRPAN 424

[Close]

BLAST of Csor.00g072460 vs. NCBI nr
Match: XP_022947007.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 734 bits (1895), Expect = 1.32e-265
Identity = 382/411 (92.94%), Postives = 382/411 (92.94%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKL-----------------------DLPNKFVINNRA 60
           MAFFTSPIPHFFKIILHHTLIERKL                       DLPNKFVINNRA
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLVSNLIQSTFSLIPSFSYQFLFLQDLPNKFVINNRA 95

Query: 61  SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN 120
           SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN
Sbjct: 96  SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN 155

Query: 121 VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS 180
           VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS
Sbjct: 156 VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS 215

Query: 181 RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDE-----EEE 240
           RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDE     EEE
Sbjct: 216 RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEE 275

Query: 241 DEEDDEEEDYSWRQRKYRGSARNQEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS 300
           DEEDDEEEDYSWRQRKYRGSARN EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS
Sbjct: 276 DEEDDEEEDYSWRQRKYRGSARNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS 335

Query: 301 FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW 360
           FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW
Sbjct: 336 FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW 395

Query: 361 AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 446

[Close]

BLAST of Csor.00g072460 vs. NCBI nr
Match: XP_023532571.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726 bits (1875), Expect = 5.19e-263
Identity = 372/384 (96.88%), Postives = 378/384 (98.44%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHN+ATL+LPDGANWEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKK 95

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATE+DYPIKPRIFRRL
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIKPRIFRRL 155

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKD   AFDRRPPILLPKSENED EDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 156 RKDRNIAFDRRPPILLPKSENED-EDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 215

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEE-DEEDDEEEDYSWRQRKYRGSARNQEDG 240
           RTNMKIKHQRFTTPQRFSDD+EEDEDEDEEEE DEEDDEEEDYSWR+RKYRGSARN EDG
Sbjct: 216 RTNMKIKHQRFTTPQRFSDDDEEDEDEDEEEEEDEEDDEEEDYSWRRRKYRGSARNHEDG 275

Query: 241 GRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSL 300
           GRFSPESMRPMHPPRTPKPLTENQ+RVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSL
Sbjct: 276 GRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSL 335

Query: 301 PRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDV 360
           PRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDV
Sbjct: 336 PRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDV 395

Query: 361 CVFELMNRIPKVFFKVTIFRRPAN 383
           CVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 CVFELMNRIPKVFFKVTIFRRPAN 418

[Close]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL
Match: A0A6J1G5F5 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451014 PE=4 SV=1)

HSP 1 Score: 747 bits (1929), Expect = 1.79e-271
Identity = 382/388 (98.45%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 95

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 155

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 156 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 215

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDE-----EEEDEEDDEEEDYSWRQRKYRGSARN 240
           RTNMKIKHQRFTTPQRFSDDEEEDEDEDE     EEEDEEDDEEEDYSWRQRKYRGSARN
Sbjct: 216 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEEDEEDDEEEDYSWRQRKYRGSARN 275

Query: 241 QEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN 300
            EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN
Sbjct: 276 HEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGN 335

Query: 301 YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK 360
           YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK
Sbjct: 336 YLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLK 395

Query: 361 EGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           EGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 EGDVCVFELMNRIPKVFFKVTIFRRPAN 423

[Close]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL
Match: A0A6J1L7I9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111499897 PE=4 SV=1)

HSP 1 Score: 735 bits (1898), Expect = 9.84e-267
Identity = 375/389 (96.40%), Postives = 381/389 (97.94%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           MAFFTSPIPHFFKIILHHTLIERKLDLP+KFVINNRASLLHNNATL+LPDGANWEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPSKFVINNRASLLHNNATLSLPDGANWEVELKK 95

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
           SDGKVSFARGWPEFV+FYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL
Sbjct: 96  SDGKVSFARGWPEFVQFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 155

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 180
           RKDH RAFDRRPPILLPKSENEDDED+SVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM
Sbjct: 156 RKDHNRAFDRRPPILLPKSENEDDEDNSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMM 215

Query: 181 RTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDE------EEDYSWRQRKYRGSAR 240
           RTNMKIKHQRFTTPQRFSDDEEEDEDE+EEEEDEED+E      EEDYSWRQRKYRGSAR
Sbjct: 216 RTNMKIKHQRFTTPQRFSDDEEEDEDEEEEEEDEEDEEDEEDEEEEDYSWRQRKYRGSAR 275

Query: 241 NQEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG 300
           N EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG
Sbjct: 276 NHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTG 335

Query: 301 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL 360
           NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL
Sbjct: 336 NYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQL 395

Query: 361 KEGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           KEGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 KEGDVCVFELMNRIPKVFFKVTIFRRPAN 424

[Close]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL
Match: A0A6J1G597 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451014 PE=4 SV=1)

HSP 1 Score: 734 bits (1895), Expect = 6.41e-266
Identity = 382/411 (92.94%), Postives = 382/411 (92.94%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKL-----------------------DLPNKFVINNRA 60
           MAFFTSPIPHFFKIILHHTLIERKL                       DLPNKFVINNRA
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLVSNLIQSTFSLIPSFSYQFLFLQDLPNKFVINNRA 95

Query: 61  SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN 120
           SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN
Sbjct: 96  SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN 155

Query: 121 VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS 180
           VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS
Sbjct: 156 VLIFDLSATEIDYPIKPRIFRRLRKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVS 215

Query: 181 RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDE-----EEE 240
           RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDE     EEE
Sbjct: 216 RKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEE 275

Query: 241 DEEDDEEEDYSWRQRKYRGSARNQEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS 300
           DEEDDEEEDYSWRQRKYRGSARN EDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS
Sbjct: 276 DEEDDEEEDYSWRQRKYRGSARNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASS 335

Query: 301 FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW 360
           FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW
Sbjct: 336 FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRW 395

Query: 361 AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 383
           AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN
Sbjct: 396 AFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 446

[Close]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL
Match: A0A6J1DVA1 (B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=3673 GN=LOC111024767 PE=4 SV=1)

HSP 1 Score: 503 bits (1296), Expect = 8.29e-176
Identity = 278/387 (71.83%), Postives = 312/387 (80.62%), Query Frame = 0


Query: 2   AFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKS 61
           +FFTS  PHFFKIILH  LIE KL+LP KFV+NN  SLL   A+L LP GA WEVELKKS
Sbjct: 3   SFFTSETPHFFKIILHQNLIEGKLELPKKFVMNNGGSLLQRTASLRLPSGAKWEVELKKS 62

Query: 62  DGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIK-PRIFRRL 121
           DGKV F RGWPEFVEFY+VK GYFVVFR EGN CFNV+IFDLSATE+DYP+   RIF R 
Sbjct: 63  DGKVWFGRGWPEFVEFYSVKLGYFVVFRYEGNCCFNVVIFDLSATEMDYPVPLKRIFNR- 122

Query: 122 RKDHTRAFDRRPPILLPKSENEDDEDD--SVVVLNDAVSRKRKREKDHEA-AFCSLREMK 181
                R FDRR P+L+PK E+E+D+DD  SV +LN  VSRKR RE+D EA  +CSLR+MK
Sbjct: 123 ---RNRGFDRRQPLLVPKIEDEEDDDDDGSVRMLN-GVSRKRMRERDQEAPVYCSLRKMK 182

Query: 182 KMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQE 241
           KMMR  +KIK  RFTTPQRF+DD +E+E+EDEEEE+E  D E +YS RQ  YR S  N  
Sbjct: 183 KMMRQTVKIKR-RFTTPQRFNDDGDEEEEEDEEEEEE--DLEMNYSRRQNNYRAS--NHR 242

Query: 242 DGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYL 301
            GGRFSPESMRP  PPR P+PLTENQER+LR AS+FK  T+NPSFMVTMRPSYIQTGNYL
Sbjct: 243 SGGRFSPESMRPEQPPRIPQPLTENQERLLRRASAFKFATRNPSFMVTMRPSYIQTGNYL 302

Query: 302 SLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEG 361
           SLPRSFAERYL+ES DVKLE ADGRIWSVWCGVRWAFTRRRTELK GWK FAV+N L+EG
Sbjct: 303 SLPRSFAERYLKESVDVKLEAADGRIWSVWCGVRWAFTRRRTELKAGWKNFAVENDLQEG 362

Query: 362 DVCVFELMNR-IPKVFFKVTIFRRPAN 383
           D+CVFEL+NR   KV F+VTIFRRP N
Sbjct: 363 DICVFELINRSTTKVLFRVTIFRRPDN 379

[Close]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL
Match: A0A1S3C614 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497436 PE=4 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 3.22e-154
Identity = 246/384 (64.06%), Postives = 291/384 (75.78%), Query Frame = 0


Query: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60
           M  F SP PHFFKIILH  L ++KLDLPNKFV NN  SLL N+  L+LPDGA W  +L K
Sbjct: 1   MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMK 60

Query: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRL 120
            DGK  F RGWPEFV+FY+++ GYF+VF+L+G  CFNVLIFD SATEIDYP+        
Sbjct: 61  LDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPM-------- 120

Query: 121 RKDHTRAFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHE---AAFCSLREMK 180
                    RRPP+L+PKSE+ED+E+ S+ +L++A  +KRKR +  E   +A+CSLR+MK
Sbjct: 121 ---------RRPPVLIPKSESEDEEE-SIHILHEAALKKRKRMEKKEKETSAYCSLRKMK 180

Query: 181 KMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQE 240
           K M   + +KH+ FTTPQ FSD   EDEDEDE+E     D E +YS RQ  YRGSA N+ 
Sbjct: 181 KNMEIKI-MKHREFTTPQVFSD---EDEDEDEDE-----DLETNYSPRQTNYRGSAYNES 240

Query: 241 DGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYL 300
           + GR SPESMRPM+P + P+ LTENQ  VLR ASSFK RTKNPSFMVTMRPSYIQTGN L
Sbjct: 241 EDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCL 300

Query: 301 SLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEG 360
           SLPR F+ERY++ES DVKLEV DGRIW VWCGVRWAFTRRRTELK GWKRFAVDN+L+EG
Sbjct: 301 SLPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEG 357

Query: 361 DVCVFELMNRIPKVFFKVTIFRRP 381
           D+CVFEL+N+ PKV F VTIFR P
Sbjct: 361 DICVFELINKTPKVHFHVTIFRLP 357

[Close]

BLAST of Csor.00g072460 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 3.4e-28
Identity = 115/374 (30.75%), Postives = 176/374 (47.06%), Query Frame = 0


Query: 7   PIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKVS 66
           P P F K+I   T+ E++L +P+KFV   +   L     LT+PDG  W V L+K+D K+ 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDE-LSVAVALTVPDGHVWRVGLRKADNKIW 61

Query: 67  FARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRLRKDHTR 126
           F  GW EFV+ Y+++ GY ++FR EGN  F+V IF+LS +EI+Y     +      D   
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLM------DSAH 121

Query: 127 AFDRRPPILLPKSENEDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKKMMRTNMKI 186
              +R  +     E+ +DE D+ V+   +V      E    A         + + T    
Sbjct: 122 NHFKRARLF----EDLEDE-DAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVK 181

Query: 187 KHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQEDGGRFSPES 246
             +   TP+       + ++ D EE +     ++D   R + Y  ++             
Sbjct: 182 AEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESAS------------- 241

Query: 247 MRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAER 306
                  R      E +ER +  A +F+    NP F V +RPSY+  G  + LP  FAE+
Sbjct: 242 ------ARKRTVTAEERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEK 301

Query: 307 YLQE-STDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELM 366
           YL   S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+
Sbjct: 302 YLSGISGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL 336

Query: 367 NRIPKVFFKVTIFR 380
            R      KVT FR
Sbjct: 362 -RTRDFVLKVTAFR 336

[Close]

BLAST of Csor.00g072460 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-16
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 8   IPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKVSF 67
           +  F KIIL   +IE+ + +P +FV       L +N TL  P G    + +K+   +V F
Sbjct: 31  VKKFIKIILLSRIIEKMMKVPARFV--RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWF 90

Query: 68  ARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIFRRLRKDHTRA 127
            +GW EF E +++  G+F+ F  EG+ CF V+IFD+SA+EI+YP+          D T  
Sbjct: 91  EKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL----------DDTD- 150

Query: 128 FDRRPPILLPKSEN----EDDEDDSVVVLNDAVSRKRKRE 164
            D R  ++    +     E  +DD  VV  D + +K+K++
Sbjct: 151 -DNREEVMDDDEQGFTGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of Csor.00g072460 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-14
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFV-KLQGSKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF++SA E  YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]

BLAST of Csor.00g072460 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-14
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 6   SPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKKSDGKV 65
           SP+  FFK++L  T+ ++ + +P +FV   + S L    TL  P G    ++LK+   ++
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFV-KLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 66  SFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPI 113
            F  GW EF E ++++ G+F++F  + N  F V+IF+ SA E +YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]

BLAST of Csor.00g072460 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-14
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 261 ENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQE-STDVKLEVA 320
           E +ER +  A +F+    NP F V +RPSY+  G  + LP  FAE+YL   S  +KL++ 
Sbjct: 110 EERERAVNAAKTFE--PTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLG 169

Query: 321 DGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFR 380
           + + W V C     +   R +   GW  F ++N + EGDVCVFEL+ R      +VT FR
Sbjct: 170 E-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEGDVCVFELL-RTRDFVLEVTAFR 221

The following BLAST results are available for this feature:

BLAST of Csor.00g072460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	4.7e-27	30.75	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB4	3.2e-15	33.13	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]
Q84R27	2.3e-13	34.58	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9ZSH7	2.3e-13	34.58	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q8S2E6	7.1e-07	26.20	B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Csor.00g072460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605261.1	5.17e-275	100.00	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_022947008.1	3.70e-271	98.45	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moscha...	[more]
XP_023007388.1	2.03e-266	96.40	B3 domain-containing transcription factor VRN1-like [Cucurbita maxima]	[more]
XP_022947007.1	1.32e-265	92.94	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
XP_023532571.1	5.19e-263	96.88	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g072460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5F5	1.79e-271	98.45	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1L7I9	9.84e-267	96.40	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1G597	6.41e-266	92.94	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1DVA1	8.29e-176	71.83	B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=36...	[more]
A0A1S3C614	3.22e-154	64.06	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Csor.00g072460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	3.4e-28	30.75	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	2.3e-16	33.13	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	1.6e-14	34.58	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	1.6e-14	34.58	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	6.2e-14	38.33	related to vernalization1 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 201..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..263
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 4..379
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 4..379
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 11..104 e-value: 1.5E-16 score: 71.0 coord: 282..381 e-value: 7.2E-13 score: 58.8
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 282..380 e-value: 1.6E-18 score: 66.5 coord: 11..102 e-value: 1.5E-13 score: 50.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 10..104 score: 12.252032
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 282..381 score: 14.000619
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 280..379 e-value: 1.68183E-22 score: 88.924
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 9..102 e-value: 8.77234E-19 score: 78.9089
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 259..381 e-value: 1.3E-31 score: 110.8
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 5..105 e-value: 5.4E-23 score: 82.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 4..104
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 277..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g072460.m01	Csor.00g072460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding