Csor.00g072170 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g072170
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein SHORT-ROOT
Location	Csor_Chr02: 3079436 .. 3081766 (+)
RNA-Seq Expression	Csor.00g072170
Synteny	Csor.00g072170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACCTTGTTCAGGCTTGTCTCCAACCTTCATCAACCTTCTGATCAATCTTACAACTCAAGCACCAGCTCCAAGAATTCTGTTGATCTTCAAAATCATTGCTTCCTCAACCCATCTCCACCTGAACAATGCTTCACCAGCTCCATCATGGTGGATCAACAACATTTCTCTGCCTCCTCTTCTTCCAACAACCATCGTCCTGATAACGACCATGTTCATCAACATCACGAGTATATAAGTAAGGAATACTATTTTTATTGGTATGAGACCATTTAAGAAAAGATGTTCAAAATAGACGATATTGTATTGTTTGTTTATTCGTATTTTTATTAGGTACTGTCAATTCGACTGATCGATGGTTCGCCCCTTTAGACGTGAACTTGGAATTCTCTAATGGTTGGGCTTCTACGTTGATCGTCCAAACTGCCATTGCCATTGTTGATAACAACGCTTCTCGAATCCAACAACTCATGTGGATGCTTAACGAGCTCGGTTCGCCCTATGGCGATATTGATCAAAAATTGGCTTTTTACTTTCTTCGAGCTATGTTTAGTCATGTCACGAACTCTGGTGAACGGTGCTACCGAACCTTGGCAATGGTGTCGGAGAAACGGTCTTGTTTCGCGTCGATGAGAAGAATGGTGTTGAAGTTTCAAGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGTTATCATGGAGGCTTTTGAAGGAGAGAAGAAGTTGCATATAATTGATATTAGTAACTCCTTTTGTACTCAATGGCCAACTTTCCTCGAAGCTCTAGCATCTCGGTCAGACGAAACTCCACACCTTAGGCTCACGACGCTAGTCGCAGCCAGATCGGATAAGGTTTGAAATTTATAAATTTATGTTATATTTGTTGGAAGAGAGTTCCACGTTAGCTAATTAAGGAAATGATCATGAGTTTATAAAGTAAGAAATACATCTACATTGGTACGAGTCATTTTCAAAAACCAAAAGTTCAGATCTTATGCTTAAAGTGGACACTCAGGAAAGTCTTCCTTTCCTAATAAGGTGTATACAAGTTTAGTTGGAAATTTCTAAGTTAATTGTTGGGTCAATAATTCAAGTTTTTAGGTTGGGTTGTCTGAGATCGTTCTTATTTTTTAATTATTTAAAAAATATATATACTTTCAAATATCAAACCTTTACGAAAGAGATTGCATTTTGATTTTTGTTCTTATTTTTAAATTATTTTAAAAAATTATACTTTCAAATATCAAACATTTACAGATTAGCCATAGTAGTACTTTCAAATATCAAACATTTATAAATCACGGTTAGTAATTTGAGTTTTTAGATTGGATTGTCGGATTTTTCTTATTTTTTAATTATTTAAAAAAATTATACTTTCAAATATCATTACCCTAGTTTTGAGTTGTGAGGTTGTTCTTATTTTTGCTCTTATTTTTTAAATTATTCTTTCAAATATCAAACATTTACAAGGGAATTTACAAGGGAAAGGTAAGTAATTTGAGTTTGTAATTTTATAAATTTTATAATTTTGTTTTAGAAATGGTTAAGAAATATATAGATAAAATAAAATAAATTCTTAAGTATTGTATTGTAAATGGATTTGCAGAAGGTGATGAGAGAAATTAGCAGAAGAATGGAGAAATTCGCGAGGCTTATGGGGGTTCCCTTCAAATTCAAAGCAATATATTACTCCGGCGACATTTCACAGCTAAATTTCACGGAGTTAGGGGTTAATGACGACGAAGCCCTTGCAATTAACTGCGTCGGCGCCTTCCGCTCCGTCACGCCGGTCGAAAACCGCCGCGATTTTCTGATTTCACTGTTCGGAGCTTTGCGGCCGAGGATAATCACTGTGGTGGAGGAGCAGGCAGATCTCGATAGCGACGGCGTTGACTTTGTCAAAGACGTTCAAGAATGTTTACGGTGGTTTAGGGTTTACTTTGATTCCTTGGACGGAAGTTTCCCTTCCACAAGTGATGAAAAGTTGATGCTCGAACGCGCCGCTGGACGCGCTATCGTGGACTTGCTTGCACGCGCGCCAGCGGAGTGTGTTGAGAGGCGCGAGACGGCTGCGCGTTGGGCTCGTCGTTTGCATGAGGGCGGTTTCAAACCGGTGTCGTTTAGTGAGGATGTAAACGACGACGTACGTGCGCTTTTGAGGAGGTATAGGGATGGGTGGACGGTGTTGGATGACGGCGAGGACGCCGATGCCGGAATTTTCTTGGCTTGGAAGGGGCAGGCGGTGGTCTGGGCCGCCGCATGGACGCCTGAACCACTGGACGGAGAGAAGAGTCGCCAGAGTAGTTGTTCACATTGA

mRNA sequence

ATGGATACCTTGTTCAGGCTTGTCTCCAACCTTCATCAACCTTCTGATCAATCTTACAACTCAAGCACCAGCTCCAAGAATTCTGTTGATCTTCAAAATCATTGCTTCCTCAACCCATCTCCACCTGAACAATGCTTCACCAGCTCCATCATGGTGGATCAACAACATTTCTCTGCCTCCTCTTCTTCCAACAACCATCGTACTGTCAATTCGACTGATCGATGGTTCGCCCCTTTAGACGTGAACTTGGAATTCTCTAATGGTTGGGCTTCTACGTTGATCGTCCAAACTGCCATTGCCATTGTTGATAACAACGCTTCTCGAATCCAACAACTCATGTGGATGCTTAACGAGCTCGGTTCGCCCTATGGCGATATTGATCAAAAATTGGCTTTTTACTTTCTTCGAGCTATGTTTAGTCATGTCACGAACTCTGGTGAACGGTGCTACCGAACCTTGGCAATGGTGTCGGAGAAACGGTCTTGTTTCGCGTCGATGAGAAGAATGGTGTTGAAGTTTCAAGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGTTATCATGGAGGCTTTTGAAGGAGAGAAGAAGTTGCATATAATTGATATTAGTAACTCCTTTTGTACTCAATGGCCAACTTTCCTCGAAGCTCTAGCATCTCGGTCAGACGAAACTCCACACCTTAGGCTCACGACGCTAGTCGCAGCCAGATCGGATAAGAAGGTGATGAGAGAAATTAGCAGAAGAATGGAGAAATTCGCGAGGCTTATGGGGGTTCCCTTCAAATTCAAAGCAATATATTACTCCGGCGACATTTCACAGCTAAATTTCACGGAGTTAGGGGTTAATGACGACGAAGCCCTTGCAATTAACTGCGTCGGCGCCTTCCGCTCCGTCACGCCGGTCGAAAACCGCCGCGATTTTCTGATTTCACTGTTCGGAGCTTTGCGGCCGAGGATAATCACTGTGGTGGAGGAGCAGGCAGATCTCGATAGCGACGGCGTTGACTTTGTCAAAGACGTTCAAGAATGTTTACGGTGGTTTAGGGTTTACTTTGATTCCTTGGACGGAAGTTTCCCTTCCACAAGTGATGAAAAGTTGATGCTCGAACGCGCCGCTGGACGCGCTATCGTGGACTTGCTTGCACGCGCGCCAGCGGAGTGTGTTGAGAGGCGCGAGACGGCTGCGCGTTGGGCTCGTCGTTTGCATGAGGGCGGTTTCAAACCGGTGTCGTTTAGTGAGGATGTAAACGACGACGTACGTGCGCTTTTGAGGAGGTATAGGGATGGGTGGACGGTGTTGGATGACGGCGAGGACGCCGATGCCGGAATTTTCTTGGCTTGGAAGGGGCAGGCGGTGGTCTGGGCCGCCGCATGGACGCCTGAACCACTGGACGGAGAGAAGAGTCGCCAGAGTAGTTGTTCACATTGA

Coding sequence (CDS)

ATGGATACCTTGTTCAGGCTTGTCTCCAACCTTCATCAACCTTCTGATCAATCTTACAACTCAAGCACCAGCTCCAAGAATTCTGTTGATCTTCAAAATCATTGCTTCCTCAACCCATCTCCACCTGAACAATGCTTCACCAGCTCCATCATGGTGGATCAACAACATTTCTCTGCCTCCTCTTCTTCCAACAACCATCGTACTGTCAATTCGACTGATCGATGGTTCGCCCCTTTAGACGTGAACTTGGAATTCTCTAATGGTTGGGCTTCTACGTTGATCGTCCAAACTGCCATTGCCATTGTTGATAACAACGCTTCTCGAATCCAACAACTCATGTGGATGCTTAACGAGCTCGGTTCGCCCTATGGCGATATTGATCAAAAATTGGCTTTTTACTTTCTTCGAGCTATGTTTAGTCATGTCACGAACTCTGGTGAACGGTGCTACCGAACCTTGGCAATGGTGTCGGAGAAACGGTCTTGTTTCGCGTCGATGAGAAGAATGGTGTTGAAGTTTCAAGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGTTATCATGGAGGCTTTTGAAGGAGAGAAGAAGTTGCATATAATTGATATTAGTAACTCCTTTTGTACTCAATGGCCAACTTTCCTCGAAGCTCTAGCATCTCGGTCAGACGAAACTCCACACCTTAGGCTCACGACGCTAGTCGCAGCCAGATCGGATAAGAAGGTGATGAGAGAAATTAGCAGAAGAATGGAGAAATTCGCGAGGCTTATGGGGGTTCCCTTCAAATTCAAAGCAATATATTACTCCGGCGACATTTCACAGCTAAATTTCACGGAGTTAGGGGTTAATGACGACGAAGCCCTTGCAATTAACTGCGTCGGCGCCTTCCGCTCCGTCACGCCGGTCGAAAACCGCCGCGATTTTCTGATTTCACTGTTCGGAGCTTTGCGGCCGAGGATAATCACTGTGGTGGAGGAGCAGGCAGATCTCGATAGCGACGGCGTTGACTTTGTCAAAGACGTTCAAGAATGTTTACGGTGGTTTAGGGTTTACTTTGATTCCTTGGACGGAAGTTTCCCTTCCACAAGTGATGAAAAGTTGATGCTCGAACGCGCCGCTGGACGCGCTATCGTGGACTTGCTTGCACGCGCGCCAGCGGAGTGTGTTGAGAGGCGCGAGACGGCTGCGCGTTGGGCTCGTCGTTTGCATGAGGGCGGTTTCAAACCGGTGTCGTTTAGTGAGGATGTAAACGACGACGTACGTGCGCTTTTGAGGAGGTATAGGGATGGGTGGACGGTGTTGGATGACGGCGAGGACGCCGATGCCGGAATTTTCTTGGCTTGGAAGGGGCAGGCGGTGGTCTGGGCCGCCGCATGGACGCCTGAACCACTGGACGGAGAGAAGAGTCGCCAGAGTAGTTGTTCACATTGA

Protein sequence

MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH

Homology

[Close]

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot
Match: Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.0e-128
Identity = 254/533 (47.65%), Postives = 337/533 (63.23%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQ---------PSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIM 60
           MDTLFRLVS   Q          S  S  S+T++ +     ++ F      E+CF  +  
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECF--NFF 60

Query: 61  VDQQHFSASSSSNNHRTVNSTDRWFAPLDVNLEF----------------------SNG- 120
           +D++  S+SSS +NH   N+ + +++P     ++                      S+G 
Sbjct: 61  MDEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGH 120

Query: 121 -----------------------WASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGD 180
                                  WA +++++ A A  D + +R QQ++W LNEL SPYGD
Sbjct: 121 HNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGD 180

Query: 181 IDQKLAFYFLRAMFSHVTNSGERCYRTL--AMVSEKRSCFASMRRMVLKFQEVSPWMTFG 240
            +QKLA YFL+A+F+ +T SGERCYRT+  A  +EK   F S R+ VLKFQEVSPW TFG
Sbjct: 181 TEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFG 240

Query: 241 HVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR--- 300
           HVA+NG I+EA +GE K+HI+DIS++FCTQWPT LEALA+RSD+TPHLRLTT+V A    
Sbjct: 241 HVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFV 300

Query: 301 ----SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCV 360
               +  ++M+EI  RMEKFARLMGVPFKF  I++ GD+S+ +  EL V  DE LAINCV
Sbjct: 301 NDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCV 360

Query: 361 GAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADL---DSDGVD--FVKDVQECLRWF 420
           GA   +    + RD +IS F  LRPRI+TVVEE+ADL   +  G D  F++   ECLRWF
Sbjct: 361 GAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWF 420

Query: 421 RVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFK 465
           RV F+S + SFP TS+E+LMLERAAGRAIVDL+A  P++  ERRETA +W+RR+   GF 
Sbjct: 421 RVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFG 480

[Close]

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot
Match: A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 8.9e-116
Identity = 233/509 (45.78%), Postives = 322/509 (63.26%), Query Frame = 0


Query: 16  DQSYNSSTSSK---NSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSSNNHRTVNST 75
           D+ ++SS+SS+   +   +Q        P     T +        S++++   H    + 
Sbjct: 99  DEDFSSSSSSRHFHHGAPVQQ----QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAA 158

Query: 76  DRWFAPLDVNLEFSN---------------------GWASTLIVQTAIAIVDNNASRIQQ 135
           D  F P D+NL+FS+                      WAS L+++ A ++   ++ R+QQ
Sbjct: 159 DLSFPP-DLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQ 218

Query: 136 LMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVL 195
           LMWMLNEL SPYGD++QKLA YFL+ +F+ +T SG+R  RTLA  S++ + F S RR  L
Sbjct: 219 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTAL 278

Query: 196 KFQEVSPWMTFGHVASNGVIMEAF--------EGEKKLHIIDISNSFCTQWPTFLEALAS 255
           +FQE+SPW +FGHVA+NG I+E+F           ++ HI+D+SN+FCTQWPT LEALA+
Sbjct: 279 RFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALAT 338

Query: 256 RS-DETPHLRLTTLVAARSD------KKVMREISRRMEKFARLMGVPFKFKAIYYSGDIS 315
           RS DETPHL +TT+V+A         ++VMREI +RMEKFARLMGVPF+F+A+++SGD++
Sbjct: 339 RSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLA 398

Query: 316 QLNFTELGVND---DEALAINCVGAFRSVTPVE-NRRDFLISLFGALRPRIITVVEEQAD 375
           +L+   L + +     ALA+NCV + R V P    RRD   +    L PR++TVVEE+AD
Sbjct: 399 ELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEAD 458

Query: 376 LDSDGVD--------------FVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGR 435
           L +   D              F+K   E LR+F  Y DSL+ SFP TS+E+L LER AGR
Sbjct: 459 LVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGR 518

Query: 436 AIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLD 465
           AIVDL++   +E +ERRETAA WARR+   GF PV+FSEDV DDVR+LLRRYR+GW++ +
Sbjct: 519 AIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMRE 578

[Close]

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot
Match: Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 417.9 bits (1073), Expect = 1.5e-115
Identity = 234/508 (46.06%), Postives = 321/508 (63.19%), Query Frame = 0


Query: 16  DQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSS--NNHRTVNSTD 75
           D+ ++SS+SS++     +   +    P    T +        S SS++    H    + D
Sbjct: 99  DEDFSSSSSSRH---FHHGARVQQQQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAAD 158

Query: 76  RWFAPLDVNLEFSN---------------------GWASTLIVQTAIAIVDNNASRIQQL 135
             F P D+NL+FS+                      WAS L+++ A ++   ++ R+QQL
Sbjct: 159 LSFPP-DLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQL 218

Query: 136 MWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLK 195
           MWMLNEL SPYGD++QKLA YFL+ +F+ +T SG R  RTLA  S++ + F S RR  L+
Sbjct: 219 MWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALR 278

Query: 196 FQEVSPWMTFGHVASNGVIMEAF--------EGEKKLHIIDISNSFCTQWPTFLEALASR 255
           FQE+SPW +FGHVA+NG I+E+F           ++ HI+D+SN+FCTQWPT LEALA+R
Sbjct: 279 FQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATR 338

Query: 256 S-DETPHLRLTTLVAARSD------KKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQ 315
           S DETPHL +TT+V+A         ++VMREI +RMEKFARLMGVPF+F+A+++SGD+++
Sbjct: 339 SADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAE 398

Query: 316 LNFTELGVND---DEALAINCVGAFRSVTPVE-NRRDFLISLFGALRPRIITVVEEQADL 375
           L+   L + +     ALA+NCV + R V P    RRD   +    L PR++TVVEE+ADL
Sbjct: 399 LDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADL 458

Query: 376 DSDGVD--------------FVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRA 435
            +   D              F+K   E LR+F  Y DSL+ SFP TS+E+L LER AGRA
Sbjct: 459 VASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRA 518

Query: 436 IVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDD 465
           IVDL++   +E +ERRETAA WARR+   GF PV+FSEDV DDVR+LLRRYR+GW++ + 
Sbjct: 519 IVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMREA 578

[Close]

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot
Match: Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 5.4e-113
Identity = 231/515 (44.85%), Postives = 309/515 (60.00%), Query Frame = 0


Query: 16  DQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSSNNHRTVNSTDRW 75
           D+ ++SS+SS+            P PP    T            +SS+  H    + D  
Sbjct: 104 DEDFSSSSSSRQFHSGTGAPSSAPVPPPPSAT------------TSSAGGHGLFEAADFS 163

Query: 76  FAPLDVNLEF----------------------SNGWASTLIVQTAIAIVDNNASRIQQLM 135
           F  +D++L+F                      S  WA+ L+++ A A+   ++ R+QQLM
Sbjct: 164 FPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLM 223

Query: 136 WMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKF 195
           WMLNEL SPYGD+DQKLA YFL+ +F+ +T SG R  RTLA  S++ + F S RR  LKF
Sbjct: 224 WMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKF 283

Query: 196 QEVSPWMTFGHVASNGVIMEAF-------------------EGEKKLHIIDISNSFCTQW 255
           QE+SPW  FGHVA+NG I+E+F                       +LHI+D+SN+FCTQW
Sbjct: 284 QELSPWTPFGHVAANGAILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQW 343

Query: 256 PTFLEALASR-SDETPHLRLTTLV----AARSDKKVMREISRRMEKFARLMGVPFKFKAI 315
           PT LEALA+R SD+TPHL +TT+V     + + ++VMREI +R+EKFARLMGVPF F+A+
Sbjct: 344 PTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAV 403

Query: 316 YYSGDISQLNFTELGVND---DEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITV 375
           ++SGD++ L+   L + +     ALA+NCV A R V      RD  ++    L PR++TV
Sbjct: 404 HHSGDLADLDLAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTV 463

Query: 376 VEEQADLDSDGVD----------FVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAA 435
           VEE+ADL +   D          FVK   E LR+F  Y DSL+ SFP TS+E+L LERA 
Sbjct: 464 VEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAV 523

Query: 436 GRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTV 465
           GRAIVDL++   ++  ERRETAA WARR+   GF P +FSEDV DDVR+LLRRY++GW++
Sbjct: 524 GRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSM 583

[Close]

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot
Match: A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-112
Identity = 230/515 (44.66%), Postives = 309/515 (60.00%), Query Frame = 0


Query: 16  DQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSASSSSNNHRTVNSTDRW 75
           D+ ++SS+SS+            P PP    T            +SS+  H    + D  
Sbjct: 104 DEDFSSSSSSRQFHSGTGAPSSAPVPPPPSAT------------TSSAGGHGLFEAADFS 163

Query: 76  FAPLDVNLEF----------------------SNGWASTLIVQTAIAIVDNNASRIQQLM 135
           F  +D++L+F                      S  WA+ L+++ A A+   ++ R+QQLM
Sbjct: 164 FPQVDISLDFGGSPAVPSSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLM 223

Query: 136 WMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKF 195
           WMLNEL SPYGD+DQKLA YFL+ +F+ +T SG R  RTLA  S++ + F S RR  LKF
Sbjct: 224 WMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKF 283

Query: 196 QEVSPWMTFGHVASNGVIMEAF-------------------EGEKKLHIIDISNSFCTQW 255
           QE+SPW  FGHVA+NG I+E+F                       +LHI+D+SN+FCTQW
Sbjct: 284 QELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQW 343

Query: 256 PTFLEALASR-SDETPHLRLTTLV----AARSDKKVMREISRRMEKFARLMGVPFKFKAI 315
           PT LEALA+R SD+TPHL +TT+V     + + ++VMREI +R+EKFARLMGVPF F+A+
Sbjct: 344 PTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAV 403

Query: 316 YYSGDISQLNFTELGVND---DEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITV 375
           +++GD++ L+   L + +     ALA+NCV A R V      RD  ++    L PR++TV
Sbjct: 404 HHAGDLADLDLAALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTV 463

Query: 376 VEEQADLDSDGVD----------FVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAA 435
           VEE+ADL +   D          FVK   E LR+F  Y DSL+ SFP TS+E+L LERA 
Sbjct: 464 VEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAV 523

Query: 436 GRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTV 465
           GRAIVDL++   ++  ERRETAA WARR+   GF P +FSEDV DDVR+LLRRY++GW++
Sbjct: 524 GRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSM 583

[Close]

BLAST of Csor.00g072170 vs. NCBI nr
Match: KAG6605232.1 (Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 963 bits (2489), Expect = 0.0
Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS
Sbjct: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60

Query: 61  SSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG 120
           SSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG
Sbjct: 61  SSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG 120

Query: 121 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM 180
           SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM
Sbjct: 121 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM 180

Query: 181 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR 240
           TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR
Sbjct: 181 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR 240

Query: 241 SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 300
           SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR
Sbjct: 241 SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 300

Query: 301 SVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 360
           SVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG
Sbjct: 301 SVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 360

Query: 361 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 420
           SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN
Sbjct: 361 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 420

Query: 421 DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 479
           DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH
Sbjct: 421 DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 479

[Close]

BLAST of Csor.00g072170 vs. NCBI nr
Match: KAG7035198.1 (Protein SHORT-ROOT [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 945 bits (2443), Expect = 0.0
Identity = 477/493 (96.75%), Postives = 478/493 (96.96%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS
Sbjct: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60

Query: 61  SSSNNHR--------------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120
           SSS NHR              TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA
Sbjct: 61  SSS-NHRPDNDHVHQHHEYISTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120

Query: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180
           SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM
Sbjct: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180

Query: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240
           RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD
Sbjct: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240

Query: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300
           ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSG+ISQLNFTELGVN
Sbjct: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGEISQLNFTELGVN 300

Query: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360
           DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE
Sbjct: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360

Query: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420
           CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH
Sbjct: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420

Query: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 479
           EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP
Sbjct: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 480

[Close]

BLAST of Csor.00g072170 vs. NCBI nr
Match: XP_022947719.1 (protein SHORT-ROOT-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 934 bits (2413), Expect = 0.0
Identity = 472/493 (95.74%), Postives = 474/493 (96.15%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFL PSPPEQCFTSS MVDQQHFSAS
Sbjct: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLIPSPPEQCFTSSFMVDQQHFSAS 60

Query: 61  SSSNNHR--------------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120
           SSS NHR              T+NSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA
Sbjct: 61  SSS-NHRPDNDHVHQDHEYISTINSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120

Query: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180
           SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM
Sbjct: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180

Query: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240
           RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD
Sbjct: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240

Query: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300
           ETPHLRLTTLVAARSDKKVMREISRR+EKFARLMGVPFKFKAIYYSGDISQLNFTELGVN
Sbjct: 241 ETPHLRLTTLVAARSDKKVMREISRRIEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300

Query: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360
           DDEALAINCVGAFRSVTPVENRRDFLIS FGALRPRIITVVEEQADLDSDGVDFVKDVQE
Sbjct: 301 DDEALAINCVGAFRSVTPVENRRDFLISRFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360

Query: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420
           CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH
Sbjct: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420

Query: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 479
           EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP
Sbjct: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 480

[Close]

BLAST of Csor.00g072170 vs. NCBI nr
Match: XP_023006995.1 (protein SHORT-ROOT-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 921 bits (2380), Expect = 0.0
Identity = 465/493 (94.32%), Postives = 472/493 (95.74%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNL QPSDQSYNSSTSSKNSVDLQNHCFLNP PPEQCFTSS MVDQ HFSAS
Sbjct: 23  MDTLFRLVSNL-QPSDQSYNSSTSSKNSVDLQNHCFLNPPPPEQCFTSSFMVDQPHFSAS 82

Query: 61  SSSNNHR--------------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120
           SSS NHR              T+NSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA
Sbjct: 83  SSS-NHRPDKDHVHQDHEYISTINSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 142

Query: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180
           S+IQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCY+TLAMVSEKRSCFASM
Sbjct: 143 SQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYQTLAMVSEKRSCFASM 202

Query: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240
           RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD
Sbjct: 203 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 262

Query: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300
           ETPHLRLTTLV ARSDKK+MREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN
Sbjct: 263 ETPHLRLTTLVVARSDKKMMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 322

Query: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360
           DDEALAINCVGAFRSVTPV+NRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE
Sbjct: 323 DDEALAINCVGAFRSVTPVDNRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 382

Query: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420
           CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH
Sbjct: 383 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 442

Query: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 479
           EGGFKPVSFSEDVNDDVRALLR+Y+DGWTVLDDGE ADAGIFLAWKGQAVVWAAAWTPEP
Sbjct: 443 EGGFKPVSFSEDVNDDVRALLRKYKDGWTVLDDGEGADAGIFLAWKGQAVVWAAAWTPEP 502

[Close]

BLAST of Csor.00g072170 vs. NCBI nr
Match: XP_023533110.1 (protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 916 bits (2367), Expect = 0.0
Identity = 466/491 (94.91%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNL QPSDQSYNSSTSSKNSVDLQNHCFLNP PPEQCFTSS MVDQQHFSAS
Sbjct: 1   MDTLFRLVSNL-QPSDQSYNSSTSSKNSVDLQNHCFLNPPPPEQCFTSSFMVDQQHFSAS 60

Query: 61  SSSNN-------HR------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNAS 120
           SSSN+       HR      TVNSTDRWFAPLDVNLEFSNGWASTLIVQ AIAIVDNNAS
Sbjct: 61  SSSNHRLDNDHVHRDHEYISTVNSTDRWFAPLDVNLEFSNGWASTLIVQIAIAIVDNNAS 120

Query: 121 RIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMR 180
           RIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMR
Sbjct: 121 RIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMR 180

Query: 181 RMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDE 240
           RMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDE
Sbjct: 181 RMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDE 240

Query: 241 TPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVND 300
           TPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVND
Sbjct: 241 TPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVND 300

Query: 301 DEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQEC 360
           DEALAINC GAFRSVTPV+NRRDFLISLFGALRPRIITVVEE ADLDSDGVDFVKDVQEC
Sbjct: 301 DEALAINCAGAFRSVTPVDNRRDFLISLFGALRPRIITVVEEPADLDSDGVDFVKDVQEC 360

Query: 361 LRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHE 420
           LRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHE
Sbjct: 361 LRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHE 420

Query: 421 GGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPL 478
           GGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAW PE +
Sbjct: 421 GGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWAPESV 480

[Close]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL
Match: A0A6J1G7N4 (protein SHORT-ROOT-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451501 PE=3 SV=1)

HSP 1 Score: 934 bits (2413), Expect = 0.0
Identity = 472/493 (95.74%), Postives = 474/493 (96.15%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFL PSPPEQCFTSS MVDQQHFSAS
Sbjct: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLIPSPPEQCFTSSFMVDQQHFSAS 60

Query: 61  SSSNNHR--------------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120
           SSS NHR              T+NSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA
Sbjct: 61  SSS-NHRPDNDHVHQDHEYISTINSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120

Query: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180
           SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM
Sbjct: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180

Query: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240
           RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD
Sbjct: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240

Query: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300
           ETPHLRLTTLVAARSDKKVMREISRR+EKFARLMGVPFKFKAIYYSGDISQLNFTELGVN
Sbjct: 241 ETPHLRLTTLVAARSDKKVMREISRRIEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300

Query: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360
           DDEALAINCVGAFRSVTPVENRRDFLIS FGALRPRIITVVEEQADLDSDGVDFVKDVQE
Sbjct: 301 DDEALAINCVGAFRSVTPVENRRDFLISRFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360

Query: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420
           CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH
Sbjct: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420

Query: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 479
           EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP
Sbjct: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 480

[Close]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL
Match: A0A6J1L1R5 (protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 PE=3 SV=1)

HSP 1 Score: 921 bits (2380), Expect = 0.0
Identity = 465/493 (94.32%), Postives = 472/493 (95.74%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNL QPSDQSYNSSTSSKNSVDLQNHCFLNP PPEQCFTSS MVDQ HFSAS
Sbjct: 23  MDTLFRLVSNL-QPSDQSYNSSTSSKNSVDLQNHCFLNPPPPEQCFTSSFMVDQPHFSAS 82

Query: 61  SSSNNHR--------------TVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 120
           SSS NHR              T+NSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA
Sbjct: 83  SSS-NHRPDKDHVHQDHEYISTINSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNA 142

Query: 121 SRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASM 180
           S+IQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCY+TLAMVSEKRSCFASM
Sbjct: 143 SQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYQTLAMVSEKRSCFASM 202

Query: 181 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 240
           RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD
Sbjct: 203 RRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSD 262

Query: 241 ETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 300
           ETPHLRLTTLV ARSDKK+MREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN
Sbjct: 263 ETPHLRLTTLVVARSDKKMMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVN 322

Query: 301 DDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 360
           DDEALAINCVGAFRSVTPV+NRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE
Sbjct: 323 DDEALAINCVGAFRSVTPVDNRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQE 382

Query: 361 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 420
           CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH
Sbjct: 383 CLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLH 442

Query: 421 EGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEP 479
           EGGFKPVSFSEDVNDDVRALLR+Y+DGWTVLDDGE ADAGIFLAWKGQAVVWAAAWTPEP
Sbjct: 443 EGGFKPVSFSEDVNDDVRALLRKYKDGWTVLDDGEGADAGIFLAWKGQAVVWAAAWTPEP 502

[Close]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL
Match: A0A6J1G7P9 (protein SHORT-ROOT-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451501 PE=3 SV=1)

HSP 1 Score: 910 bits (2353), Expect = 0.0
Identity = 458/479 (95.62%), Postives = 464/479 (96.87%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFL PSPPEQCFTSS MVDQQHFSAS
Sbjct: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLIPSPPEQCFTSSFMVDQQHFSAS 60

Query: 61  SSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG 120
           SSSN+    +   +    ++VNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG
Sbjct: 61  SSSNHRPDNDHVHQDHEYINVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG 120

Query: 121 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM 180
           SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM
Sbjct: 121 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM 180

Query: 181 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR 240
           TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR
Sbjct: 181 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR 240

Query: 241 SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 300
           SDKKVMREISRR+EKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR
Sbjct: 241 SDKKVMREISRRIEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 300

Query: 301 SVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 360
           SVTPVENRRDFLIS FGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG
Sbjct: 301 SVTPVENRRDFLISRFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 360

Query: 361 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 420
           SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN
Sbjct: 361 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 420

Query: 421 DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 479
           DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSS SH
Sbjct: 421 DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSSSH 479

[Close]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL
Match: A0A6J1KZB8 (protein SHORT-ROOT-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499621 PE=3 SV=1)

HSP 1 Score: 898 bits (2321), Expect = 0.0
Identity = 451/479 (94.15%), Postives = 462/479 (96.45%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIMVDQQHFSAS 60
           MDTLFRLVSNL QPSDQSYNSSTSSKNSVDLQNHCFLNP PPEQCFTSS MVDQ HFSAS
Sbjct: 23  MDTLFRLVSNL-QPSDQSYNSSTSSKNSVDLQNHCFLNPPPPEQCFTSSFMVDQPHFSAS 82

Query: 61  SSSNNHRTVNSTDRWFAPLDVNLEFSNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELG 120
           SSSN+    +   +    ++VNLEFSNGWASTLIVQTAIAIVDNNAS+IQQLMWMLNELG
Sbjct: 83  SSSNHRPDKDHVHQDHEYINVNLEFSNGWASTLIVQTAIAIVDNNASQIQQLMWMLNELG 142

Query: 121 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWM 180
           SPYGDIDQKLAFYFLRAMFSHVTNSGERCY+TLAMVSEKRSCFASMRRMVLKFQEVSPWM
Sbjct: 143 SPYGDIDQKLAFYFLRAMFSHVTNSGERCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWM 202

Query: 181 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR 240
           TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLV AR
Sbjct: 203 TFGHVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVVAR 262

Query: 241 SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 300
           SDKK+MREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR
Sbjct: 263 SDKKMMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFR 322

Query: 301 SVTPVENRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 360
           SVTPV+NRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG
Sbjct: 323 SVTPVDNRRDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDG 382

Query: 361 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 420
           SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN
Sbjct: 383 SFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVN 442

Query: 421 DDVRALLRRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 479
           DDVRALLR+Y+DGWTVLDDGE ADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH
Sbjct: 443 DDVRALLRKYKDGWTVLDDGEGADAGIFLAWKGQAVVWAAAWTPEPLDGEKSRQSSCSH 500

[Close]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL
Match: A0A0A0LLY3 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 5.81e-224
Identity = 334/502 (66.53%), Postives = 399/502 (79.48%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQPSDQ-SYN--SSTSSKNSVDLQNHCFLNPSPPEQ-CFTSSIMVDQQH 60
           MDTL RLV++  + SDQ SYN  SS+SSKNS D  ++ F   +P  Q CF +  M D+ H
Sbjct: 1   MDTLLRLVNDRLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDH 60

Query: 61  FSASSSSNNHR-----------TVNSTDRW--FAPLDV--NLEFSNGWASTLIVQTAIAI 120
           FSASSSS++H            T  ST      AP+D   N + S  WAST+++QTAIAI
Sbjct: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGVVAPVDQDPNFDLSEEWASTILLQTAIAI 120

Query: 121 VDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRTLAMVSEKRS 180
           V+NN  RIQ LMW+LNELGSPYGDIDQKLAFYFL+ MFS VT+SG +CY TLA   EK+S
Sbjct: 121 VNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYGTLAAALEKQS 180

Query: 181 CFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDIS---NSFCTQWPTFL 240
           CF SMRRMVLKF+EVSPWM FG+VASNG +MEA +GEKKLHIIDI+   +SFCTQWPTF+
Sbjct: 181 CFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDIAGSYSSFCTQWPTFI 240

Query: 241 EALASRSDETPHLRLTTLVAARSD------KKVMREISRRMEKFARLMGVPFKFKAIYYS 300
           EALA++SD+TPHL LTTLVAA+S+      KK+M+EISRR+EKFARLMG+PFKFK I++ 
Sbjct: 241 EALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGIPFKFKPIFHY 300

Query: 301 GDISQLNFTELGVNDDEALAINCVGAFRSVTPVENRRDFLISLFGALRPRIITVVEEQAD 360
           GD+S  +FT L +  DEA+A+NC GA RSV P++NRRDFLISLF +LRP+IITVVEE+AD
Sbjct: 301 GDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFRSLRPKIITVVEEEAD 360

Query: 361 LDSDGV--DFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAE 420
           L++ G   DFVK +QECLRWFR+YFDSLDGSFP  +DE+LMLERAAGRA+VDLLAR  AE
Sbjct: 361 LNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERAAGRAVVDLLARGLAE 420

Query: 421 CVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDGEDADAGIFLA 472
            VERRETAARW RR+H+GGFKPVSFSEDVNDDVRALLRRY+DGWTV+D G+ A AG+FLA
Sbjct: 421 SVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMD-GDGAGAGMFLA 480

[Close]

BLAST of Csor.00g072170 vs. TAIR 10
Match: AT4G37650.1 (GRAS family transcription factor )

HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-129
Identity = 254/533 (47.65%), Postives = 337/533 (63.23%), Query Frame = 0


Query: 1   MDTLFRLVSNLHQ---------PSDQSYNSSTSSKNSVDLQNHCFLNPSPPEQCFTSSIM 60
           MDTLFRLVS   Q          S  S  S+T++ +     ++ F      E+CF  +  
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECF--NFF 60

Query: 61  VDQQHFSASSSSNNHRTVNSTDRWFAPLDVNLEF----------------------SNG- 120
           +D++  S+SSS +NH   N+ + +++P     ++                      S+G 
Sbjct: 61  MDEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGH 120

Query: 121 -----------------------WASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGD 180
                                  WA +++++ A A  D + +R QQ++W LNEL SPYGD
Sbjct: 121 HNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGD 180

Query: 181 IDQKLAFYFLRAMFSHVTNSGERCYRTL--AMVSEKRSCFASMRRMVLKFQEVSPWMTFG 240
            +QKLA YFL+A+F+ +T SGERCYRT+  A  +EK   F S R+ VLKFQEVSPW TFG
Sbjct: 181 TEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFG 240

Query: 241 HVASNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVAAR--- 300
           HVA+NG I+EA +GE K+HI+DIS++FCTQWPT LEALA+RSD+TPHLRLTT+V A    
Sbjct: 241 HVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFV 300

Query: 301 ----SDKKVMREISRRMEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCV 360
               +  ++M+EI  RMEKFARLMGVPFKF  I++ GD+S+ +  EL V  DE LAINCV
Sbjct: 301 NDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCV 360

Query: 361 GAFRSVTPVENRRDFLISLFGALRPRIITVVEEQADL---DSDGVD--FVKDVQECLRWF 420
           GA   +    + RD +IS F  LRPRI+TVVEE+ADL   +  G D  F++   ECLRWF
Sbjct: 361 GAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWF 420

Query: 421 RVYFDSLDGSFPSTSDEKLMLERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFK 465
           RV F+S + SFP TS+E+LMLERAAGRAIVDL+A  P++  ERRETA +W+RR+   GF 
Sbjct: 421 RVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFG 480

[Close]

BLAST of Csor.00g072170 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-46
Identity = 111/382 (29.06%), Postives = 194/382 (50.79%), Query Frame = 0


Query: 86  SNGWASTLIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNS 145
           S G    ++V  A A+ +NN    +  M  L  + S  G+  Q+L  Y L  + + +  S
Sbjct: 46  SRGDLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAAS 105

Query: 146 GERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIID 205
           G   Y++L     +   F S    V    EV P+  FG++++NG I EA + E+++HIID
Sbjct: 106 GSSIYKSLQSREPESYEFLS---YVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIID 165

Query: 206 ISNSFCTQWPTFLEALASRSDETPHLRLTTLVAARSDKKVMREISRRMEKFARLMGVPFK 265
                 +QW   ++A A+R    P++R+T +     D  V+  + +R+EK A+   VPF+
Sbjct: 166 FQIGQGSQWIALIQAFAARPGGAPNIRITGV----GDGSVLVTVKKRLEKLAKKFDVPFR 225

Query: 266 FKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSV----TPVENRRDFLISLFGALRP 325
           F A+  S    ++    L V D EAL +N       +      +EN RD L+ +  +L P
Sbjct: 226 FNAV--SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSP 285

Query: 326 RIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLER-AAGRAI 385
           +++T+VE++ + ++    F+    E L ++   F+S+D   P    E++ +E+    R +
Sbjct: 286 KVVTLVEQECNTNTS--PFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDV 345

Query: 386 VDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTVLDDG 445
           V+++A   AE +ER E   +W  R    GF+P   S  ++  +RALLR Y +G+ +    
Sbjct: 346 VNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAI---- 405

Query: 446 EDADAGIFLAWKGQAVVWAAAW 463
           E+ D  ++L W  + +V + AW
Sbjct: 406 EERDGALYLGWMDRILVSSCAW 412

[Close]

BLAST of Csor.00g072170 vs. TAIR 10
Match: AT3G49950.1 (GRAS family transcription factor )

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-46
Identity = 118/388 (30.41%), Postives = 194/388 (50.00%), Query Frame = 0


Query: 93  LIVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYRT 152
           L++  A AI  N+A+   Q++W+LN +  P GD  Q+L   FLRA+ S   +       T
Sbjct: 30  LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89

Query: 153 LAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLHIIDISNSFCT 212
           ++ + +           +  F +++PW  FG +A+N  I+ A EG   +HI+D+S + C 
Sbjct: 90  ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCM 149

Query: 213 QWPTFLEALASRSDETPHLRLTTLVAARSD-----KKVMREISRRMEKFARLMGVPFKFK 272
           Q PT ++A+ASR ++ P L   T+V++             E+  ++  FA    +  +F 
Sbjct: 150 QIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFT 209

Query: 273 AI--YYSGDISQLNFTELGV---NDDEALAINCVGAFRSV--TPVENRRDFLISLF---- 332
            +   YS   S L   +L +   + +EAL +NC    R +   P+ +    L ++F    
Sbjct: 210 IVPSTYSDGFSSL-LQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQL 269

Query: 333 GALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLMLERAA 392
            +L PRI+T++EE  DL S+  + V  ++    +F + FD+ D      S+++   E   
Sbjct: 270 RSLNPRIVTLIEEDVDLTSE--NLVNRLKSAFNYFWIPFDTTD---TFMSEQRRWYEAEI 329

Query: 393 GRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRRYRDGWTV 452
              I +++A+  AE VER ET  RW  R+ E  F  V   ED   DV+A+L  +  GW +
Sbjct: 330 SWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGM 389

Query: 453 LDDGEDADAGIFLAWKGQAVVWAAAWTP 465
               ED D  + L WKG +VV+A  W P
Sbjct: 390 --KKEDDDESLVLTWKGHSVVFATVWVP 409

[Close]

BLAST of Csor.00g072170 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 179.9 bits (455), Expect = 4.9e-45
Identity = 112/395 (28.35%), Postives = 197/395 (49.87%), Query Frame = 0


Query: 87  NGWASTL-----------IVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFL 146
           NGW STL           +V  A A+ +N+      +M  L ++ S  G+  Q+L  Y L
Sbjct: 105 NGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLL 164

Query: 147 RAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAF 206
             + + + +SG   Y+ L    E  S        +L   EV P+  FG++++NG I EA 
Sbjct: 165 EGLVAQLASSGSSIYKALNRCPEPASTELLSYMHIL--YEVCPYFKFGYMSANGAIAEAM 224

Query: 207 EGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLT---TLVAARSDKKVMREISRR 266
           + E ++HIID      +QW T ++A A+R    P +R+T    + +A +    +  +  R
Sbjct: 225 KEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNR 284

Query: 267 MEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSV----TPVENR 326
           + K A+   VPF+F ++  S  +S++    LGV   EALA+N       +       EN 
Sbjct: 285 LAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENH 344

Query: 327 RDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDE 386
           RD L+ +  +L P+++T+VE++++ ++    F     E + ++   F+S+D + P    +
Sbjct: 345 RDRLLRMVKSLSPKVVTLVEQESNTNT--AAFFPRFMETMNYYAAMFESIDVTLPRDHKQ 404

Query: 387 KLMLER-AAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALL 446
           ++ +E+    R +V+++A   A+ VER E   +W  R    GF P   S  VN  +++LL
Sbjct: 405 RINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL 464

Query: 447 RRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAW 463
           R Y D + +    E+ D  ++L W  + +V + AW
Sbjct: 465 RNYSDKYRL----EERDGALYLGWMHRDLVASCAW 489

[Close]

BLAST of Csor.00g072170 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 179.9 bits (455), Expect = 4.9e-45
Identity = 112/395 (28.35%), Postives = 197/395 (49.87%), Query Frame = 0


Query: 87  NGWASTL-----------IVQTAIAIVDNNASRIQQLMWMLNELGSPYGDIDQKLAFYFL 146
           NGW STL           +V  A A+ +N+      +M  L ++ S  G+  Q+L  Y L
Sbjct: 105 NGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLL 164

Query: 147 RAMFSHVTNSGERCYRTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAF 206
             + + + +SG   Y+ L    E  S        +L   EV P+  FG++++NG I EA 
Sbjct: 165 EGLVAQLASSGSSIYKALNRCPEPASTELLSYMHIL--YEVCPYFKFGYMSANGAIAEAM 224

Query: 207 EGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLT---TLVAARSDKKVMREISRR 266
           + E ++HIID      +QW T ++A A+R    P +R+T    + +A +    +  +  R
Sbjct: 225 KEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNR 284

Query: 267 MEKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSV----TPVENR 326
           + K A+   VPF+F ++  S  +S++    LGV   EALA+N       +       EN 
Sbjct: 285 LAKLAKQFNVPFEFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENH 344

Query: 327 RDFLISLFGALRPRIITVVEEQADLDSDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDE 386
           RD L+ +  +L P+++T+VE++++ ++    F     E + ++   F+S+D + P    +
Sbjct: 345 RDRLLRMVKSLSPKVVTLVEQESNTNT--AAFFPRFMETMNYYAAMFESIDVTLPRDHKQ 404

Query: 387 KLMLER-AAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALL 446
           ++ +E+    R +V+++A   A+ VER E   +W  R    GF P   S  VN  +++LL
Sbjct: 405 RINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL 464

Query: 447 RRYRDGWTVLDDGEDADAGIFLAWKGQAVVWAAAW 463
           R Y D + +    E+ D  ++L W  + +V + AW
Sbjct: 465 RNYSDKYRL----EERDGALYLGWMHRDLVASCAW 489

The following BLAST results are available for this feature:

BLAST of Csor.00g072170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZF7	2.0e-128	47.65	Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1	[more]
A2YN56	8.9e-116	45.78	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1	[more]
Q8H2X8	1.5e-115	46.06	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2	[more]
Q75I13	5.4e-113	44.85	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1	[more]
A2XIA8	1.2e-112	44.66	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1	[more]

BLAST of Csor.00g072170 vs. NCBI nr


Match Name	Identity	Description
KAG6605232.1	100.00	Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035198.1	96.75	Protein SHORT-ROOT [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022947719.1	95.74	protein SHORT-ROOT-like isoform X1 [Cucurbita moschata]	[more]
XP_023006995.1	94.32	protein SHORT-ROOT-like isoform X1 [Cucurbita maxima]	[more]
XP_023533110.1	94.91	protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g072170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7N4	0.0	95.74	protein SHORT-ROOT-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451501...	[more]
A0A6J1L1R5	0.0	94.32	protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 P...	[more]
A0A6J1G7P9	0.0	95.62	protein SHORT-ROOT-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451501...	[more]
A0A6J1KZB8	0.0	94.15	protein SHORT-ROOT-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499621 P...	[more]
A0A0A0LLY3	5.81e-224	66.53	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 S...	[more]

BLAST of Csor.00g072170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37650.1	1.4e-129	47.65	GRAS family transcription factor	[more]
AT2G04890.1	1.5e-46	29.06	SCARECROW-like 21	[more]
AT3G49950.1	4.5e-46	30.41	GRAS family transcription factor	[more]
AT5G48150.1	4.9e-45	28.35	GRAS family transcription factor	[more]
AT5G48150.2	4.9e-45	28.35	GRAS family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 92..463 e-value: 1.8E-95 score: 320.1
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 1..463
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 81..463 score: 65.677681
IPR030019	Protein short-root	PANTHER	PTHR31636:SF9	PROTEIN SHORT-ROOT	coord: 1..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g072170.m01	Csor.00g072170.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0048366	leaf development
biological_process	GO:0045930	negative regulation of mitotic cell cycle
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding