Csor.00g071690 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g071690
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr02: 2725314 .. 2726287 (-)
RNA-Seq Expression	Csor.00g071690
Synteny	Csor.00g071690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATGCAAGCAACCAAGGTATCTCTCGTACTTTTTTAAAAATTATCGTGTTTCAATCCTTTTATTCATTGCATGGCTTTGGTATTTCAGTTTTTTCGGTTTGAATCCGTCACCTCATACATGTTAAATATGAGTATAAGTGTTAAAAATGAAGAGCTCTACCATCATATTAAGAATGAGAAACATAAGTGGAATCAATATTCAACCCATCAATATATCAAATATAAAATTCTAGTAAAGCTACTAGATATTGTCTTTTTTGGGCTTTCACTTCACGCTTTAAGAGCCTTTCACACACATCTAAAGGGTGTTTCATTCTCTTCTCCAACCAACGTGGGATATCACGATCCACCCTCCTTCGAGGTTCATCGTAATTACTGGCACACCGCCTCGTGTCTACCTCCTTCGAGGAACAACTACCTCGCTGGCACCAAATTCACCCCCCTTCGTAACCCAGCGTCCTTACTGACACACCGCTTCGTGTCTACCCCCTTCGGGGAACAACCTCCTCGCTGTTACATAGTCCGGTGTCTAGCTCTGATACCATTTATAACGGTCTAAGCCCCTTGCTAGTAGATATTGTCTTCTTTGGACTTTCCCTTTCGGACTTCCTCTCAAGGCTTTAAAATGCGTCTACTAGGAAAGGGTGTTTCGTTCTTCTCTTCAACCAACATCGGATATTACATTACAACTATATAACATACATTTAATATATTCGAATAATAAGTGAAATGGATTTGCAGGAAGTAGAACGTAGAAATGCGCAAGGTGAGTTAATGGAGAAAAAAGTAGAGACAGTAGAGTACCGATCGTCAGCAGGGCAAGGGTTAGAAAAGAAGAACGTGCAGGTTGTCCACCAGGTTCATTCTACGCCGCAAAATTTCGCCACTAGCGGCGGCGTGCTGGCTGGAGCCGCCGCAGCGGTTGCAAACACCCTCCAGTCTGCAAAGGAAGCCATCTCTCGCAAATAA

mRNA sequence

ATGAACATGCAAGCAACCAAGGAAGTAGAACGTAGAAATGCGCAAGGTGAGTTAATGGAGAAAAAAGTAGAGACAGTAGAGTACCGATCGTCAGCAGGGCAAGGGTTAGAAAAGAAGAACGTGCAGGTTGTCCACCAGGTTCATTCTACGCCGCAAAATTTCGCCACTAGCGGCGGCGTGCTGGCTGGAGCCGCCGCAGCGGTTGCAAACACCCTCCAGTCTGCAAAGGAAGCCATCTCTCGCAAATAA

Coding sequence (CDS)

ATGAACATGCAAGCAACCAAGGAAGTAGAACGTAGAAATGCGCAAGGTGAGTTAATGGAGAAAAAAGTAGAGACAGTAGAGTACCGATCGTCAGCAGGGCAAGGGTTAGAAAAGAAGAACGTGCAGGTTGTCCACCAGGTTCATTCTACGCCGCAAAATTTCGCCACTAGCGGCGGCGTGCTGGCTGGAGCCGCCGCAGCGGTTGCAAACACCCTCCAGTCTGCAAAGGAAGCCATCTCTCGCAAATAA

Protein sequence

MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLAGAAAAVANTLQSAKEAISRK

Homology

[Close]

BLAST of Csor.00g071690 vs. NCBI nr
Match: XP_022947813.1 (uncharacterized protein LOC111451572 [Cucurbita moschata] >XP_023007040.1 uncharacterized protein LOC111499649 [Cucurbita maxima] >XP_023532058.1 uncharacterized protein LOC111794336 [Cucurbita pepo subsp. pepo] >KAG6605184.1 hypothetical protein SDJN03_02501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149 bits (375), Expect = 7.72e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60
          MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Csor.00g071690 vs. NCBI nr
Match: KAG7035166.1 (hypothetical protein SDJN02_01961, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (364), Expect = 4.02e-43
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 3  MQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLA 62
          MQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLA
Sbjct: 6  MQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLA 65

Query: 63 GAAAAVANTLQSAKEAISRK 82
          GAAAAVANTLQSAKEAISRK
Sbjct: 66 GAAAAVANTLQSAKEAISRK 85

[Close]

BLAST of Csor.00g071690 vs. NCBI nr
Match: XP_031737171.1 (uncharacterized protein LOC105434696 [Cucumis sativus])

HSP 1 Score: 122 bits (306), Expect = 2.52e-34
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60
          MNMQA KEVERRNAQG++ EK+VETV+YRSS GQGLEK+NVQVVH  HS+ +NFATSGGV
Sbjct: 1  MNMQANKEVERRNAQGQV-EKRVETVDYRSSVGQGLEKRNVQVVHLPHSSTENFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 81

[Close]

BLAST of Csor.00g071690 vs. NCBI nr
Match: XP_016902934.1 (PREDICTED: uncharacterized protein LOC103501120 [Cucumis melo])

HSP 1 Score: 121 bits (304), Expect = 5.39e-34
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGE-LMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGG 60
          MNMQA KEVERRNAQG+  +EK+VETV+YRSS GQGLEK+NVQVVH  HS+ +NFATSGG
Sbjct: 1  MNMQANKEVERRNAQGQGQVEKRVETVDYRSSVGQGLEKRNVQVVHVPHSSSENFATSGG 60

Query: 61 VLAGAAAAVANTLQSAKEAISRK 82
          VLAGAAAAVANTLQSAKEAISRK
Sbjct: 61 VLAGAAAAVANTLQSAKEAISRK 83

[Close]

BLAST of Csor.00g071690 vs. NCBI nr
Match: XP_038902745.1 (uncharacterized protein LOC120089373 [Benincasa hispida])

HSP 1 Score: 120 bits (301), Expect = 1.46e-33
Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60
          MNMQA KEVE RNAQG+ MEK+VETV+YRSSAGQGLEK+NVQV+HQ H   +NFATSGGV
Sbjct: 1  MNMQANKEVELRNAQGQ-MEKRVETVDYRSSAGQGLEKRNVQVIHQSHPPAENFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISR 81
          LAGAAAAVANTLQSAKEAISR
Sbjct: 61 LAGAAAAVANTLQSAKEAISR 80

[Close]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL
Match: A0A6J1L1V6 (uncharacterized protein LOC111499649 OS=Cucurbita maxima OX=3661 GN=LOC111499649 PE=4 SV=1)

HSP 1 Score: 149 bits (375), Expect = 3.74e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60
          MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL
Match: A0A6J1G7N3 (uncharacterized protein LOC111451572 OS=Cucurbita moschata OX=3662 GN=LOC111451572 PE=4 SV=1)

HSP 1 Score: 149 bits (375), Expect = 3.74e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60
          MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL
Match: A0A1S4E3Y2 (uncharacterized protein LOC103501120 OS=Cucumis melo OX=3656 GN=LOC103501120 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 2.61e-34
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MNMQATKEVERRNAQGE-LMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGG 60
          MNMQA KEVERRNAQG+  +EK+VETV+YRSS GQGLEK+NVQVVH  HS+ +NFATSGG
Sbjct: 1  MNMQANKEVERRNAQGQGQVEKRVETVDYRSSVGQGLEKRNVQVVHVPHSSSENFATSGG 60

Query: 61 VLAGAAAAVANTLQSAKEAISRK 82
          VLAGAAAAVANTLQSAKEAISRK
Sbjct: 61 VLAGAAAAVANTLQSAKEAISRK 83

[Close]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL
Match: A0A0A0LNC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427870 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 2.62e-30
Identity = 63/75 (84.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 8  EVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLAGAAAA 67
          EVERRNAQG++ EK+VETV+YRSS GQGLEK+NVQVVH  HS+ +NFATSGGVLAGAAAA
Sbjct: 13 EVERRNAQGQV-EKRVETVDYRSSVGQGLEKRNVQVVHLPHSSTENFATSGGVLAGAAAA 72

Query: 68 VANTLQSAKEAISRK 82
          VANTLQSAKEAISRK
Sbjct: 73 VANTLQSAKEAISRK 86

[Close]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL
Match: A0A5A7VM80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00210 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 4.21e-30
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 8  EVERRNAQGE-LMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLAGAAA 67
          EVERRNAQG+  +EK+VETV+YRSS GQGLEK+NVQVVH  HS+ +NFATSGGVLAGAAA
Sbjct: 3  EVERRNAQGQGQVEKRVETVDYRSSVGQGLEKRNVQVVHVPHSSSENFATSGGVLAGAAA 62

Query: 68 AVANTLQSAKEAISRK 82
          AVANTLQSAKEAISRK
Sbjct: 63 AVANTLQSAKEAISRK 78

[Close]

BLAST of Csor.00g071690 vs. TAIR 10
Match: AT5G67265.1 (unknown protein. )

HSP 1 Score: 71.6 bits (174), Expect = 3.2e-13
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 1  MNMQATKEV--ERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSG 60
          MN+++TKE+  E+R   G   +  VET E RSSAG+G E++NVQVVHQ H       TSG
Sbjct: 1  MNLKSTKEMETEKRKEDGSSSKVVVETTEQRSSAGKGTEQRNVQVVHQSHP-----KTSG 60

Query: 61 GVLAGAAAAVANTLQSAKEAISR 82
           VL GAAAAV +TLQSAKE IS+
Sbjct: 61 DVLVGAAAAVESTLQSAKEVISK 78

The following BLAST results are available for this feature:

BLAST of Csor.00g071690 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g071690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947813.1	7.72e-45	100.00	uncharacterized protein LOC111451572 [Cucurbita moschata] >XP_023007040.1 unchar...	[more]
KAG7035166.1	4.02e-43	100.00	hypothetical protein SDJN02_01961, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_031737171.1	2.52e-34	84.15	uncharacterized protein LOC105434696 [Cucumis sativus]	[more]
XP_016902934.1	5.39e-34	83.13	PREDICTED: uncharacterized protein LOC103501120 [Cucumis melo]	[more]
XP_038902745.1	1.46e-33	83.95	uncharacterized protein LOC120089373 [Benincasa hispida]	[more]

BLAST of Csor.00g071690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1V6	3.74e-45	100.00	uncharacterized protein LOC111499649 OS=Cucurbita maxima OX=3661 GN=LOC111499649...	[more]
A0A6J1G7N3	3.74e-45	100.00	uncharacterized protein LOC111451572 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A1S4E3Y2	2.61e-34	83.13	uncharacterized protein LOC103501120 OS=Cucumis melo OX=3656 GN=LOC103501120 PE=...	[more]
A0A0A0LNC0	2.62e-30	84.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427870 PE=4 SV=1	[more]
A0A5A7VM80	4.21e-30	82.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g071690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67265.1	3.2e-13	56.63	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g071690.m01	Csor.00g071690.m01	mRNA