Csor.00g071350 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTTGAGAGGTGCGTTGTGGCTTGGCGGTTGTTTAGGTTCGCAAATAATACAGATGGCAAAAGAAAGAAACTGACTCAGTCCTTTTTTTCTTTTCTTTTCTTTTTATTTTTTTTTAAGAAGTTTTCATTATATAGTTAAATGGGTAGCGTTACTGGATATTAAATTTTCGCCCATATAATTTTATATAAAATTTGAATAAAAAGAGATTATAACTAAATTTTCCAATAAAATAAAAAAGAGGGTCGAGGCTCTGCGCTCTTTCTTTCTGTGTCGGAAGATGCCGGAGAGAGAAGGGAATGCGTCGAGGCAGCAGACAACAAGACTACAACTCAATTTTGACTTTTCCCTCCACGAGATGAGTCTAGTGCATTGGACCGTCTGCTCGTCAAGTGCATCCCTTGCTCTTGCTCGTTTCTAGTAGCCGATCGAGTTTCTTCTACCAACAGTACATTGAAACCGAAAAACTGGACCGATGATTAGATTCTATCCTTAAAAAAAACTTCGATTCCAGACCAAACCGAGATAATTGGACTGATGCAATTAACATCATTAGATTCTATCCCAAAATTTTTTTTTTTGATTTCGGACAAAACCGAGAAAATTGGACTGACGCAATTGACATTATTAGATTCTATCCTTAAAAAAAAACTTCGATTCCAGACCAAATCGAGTAATTGACATCATTAGATTCTAAAAAAACTTCGATTCCGGGCCAAATCGAGAAAACTGGACCGATGTAATTGCAAAAAAAACTTCCATTCCAAACCAAACCGAGAAAACTGGACGGATGTAGGGTGGGCGGCATTTATAAATTCTCGACCTAACCTACTCTTTCTTGAAACTAATTGCAAAATTTAGTAATGGATGAGTAGCAAGTTCATACGATTGCTACTACTACGAGTTCAAACCTCATTTCTTAACTGAAATCTCTTTCAATTACTTCCACAATCTCGCCAATCAAATCCCATTTCTTCAGTTTCGCAGCTCACTTCATCGCTTTCTCTCCTCGGGTAATTCTTCTTTCTTTACACTTCCATTTCTTTATGATCAACAAACTTTCTTTCTTTCTTTCGTTCGTTCGTTCTTGTCTGGTTTAGAATTTTGTTGTGGATTTATCTTTCTCTTTACTGTATGTTTGTTGATGCTAGAATGATGGGGAAATCATCGGTAACTGATTATTAAGCCTATGCAGATGATTGTTAATGCTGTTCTTCATCTTTTCTGAGATATTACCATTACAAATTTTAGTTCAAATGTGAACGAAAAGATGAGTGGCAAACGCCATTACTGAGATCCTGGAGTGTTTTTGTTAATATCGTATTCGCGAATCTTGTTTAATCCTTGTGATACTTCCAGTTGTGGAATAAAGCAAAATCTATCGCTAAATGAAAACTGAAAACTATGGCTGGATTGTTCAACAAAATCATCTGTTTTGCTTGTTTTGGATTTGTTTTTCCCTTTAAAATTATCTTTTAATTTTCTGAACATTTTCTTCTAGAAATCATTTTTTGAGTTTTGATGGTCTAGATTTCTCATCATTATCTTTGTGTGTTTTCTTTTTGCAGACCGATGACCATCAAGGTTGAGCTTCAGAAGGTATAGTGTTGGACTGCTCTAGGAATTGCTTGGCTTTGCTAGATTCTATCAGAGTATAAGCAGAATTCTTGCTAGGATCCTGGGGAATTTTTGGGGCCTTTAAACAATATCTCAAAGATAGCATTGATGCCTAATATTTACGACGCTTTGATAGTTAAAGGTCAAGATACTGCCGGTCAAGAAATTAATGTGATTTGTGAAGTATAGTAATTATTAAGAAATAATCGGGTTAGAGCTGTAGCAACTGATGGTATAATGAGAGGATTGGAAGTGGTTAACACGAGAACTCCTCTAAGTGTTCCAGTCGGCGGAGTGACTCTCGGCCAAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTGGGTTTTGTAGATACTCGCACACCATCTTCTATTCATAGATCCACCCCTGCTTTTAATACATAATTATCTATTTTTGAAACAAAAAATTAAAGTAATAGATCTTTTAGCCCCGTATTGACTTGGAGGAAAAATAGGACTATTCGGAGGGCCTGGAGTGGGTAAAACAGTAGACCACCTTATTTGAATTTTTATTGACTTCAAATTTACTTTATTCAGAATCATTTCAGATTTGTATTGTAGCAAGTTGATTTTTATGTTGTGTTTCTTTGTATATGAATCAGATTCTTATTATATTCTTTTCAAGGCGTGTACAGATTGGAATTCTTGGGCTTCAGCTAATATGGATTTTCCTACACTTTATTGTTAGTTCATTCTACTTTTTGGTTAGTATTGCCATGACACTCGAAAGCTATTTGATCTCTTGTGGATTCCTACGCAAGTACAATCATCTGGATATCGACAGGGTCCAATATCTTGCCATTGTTGTTGAAAGTGATGAAGCTTATAATACCTTAAAAATTATTGAACTTCTGCAATGGTTAGAATCCATGGGCATTAGAAGTGTTTGTTTGTATGATGCTGAAGGTAATGATTTTGGGTCCATCCTAGAATTCTGAGCTCCCTTTTACTGTTGCCAAATTCTTATGAATGTCTTTCCAATGAATTATATGCTTATTTGAATGTATTTATGCTCAAGGGGTGCTTAAACAATCCAAGGATATCATTTTGAAGAAAGTAAAGAATGCATCGTTATTTCAGGTACATGCAACTGTAATAAAGATTGATTTAAACCTACAGGTTCAGTAAGTGATGATGTAGGCCCACATCTAGCAGATATTGACCTCTTTGGACTTTCTCTTTCGAGCTTTCCCTTAAAGTTTTTAAAATGCGTCTGCTTGGGGGAGATTTCCACACTCTTATAAAGAATGTTCCGTTCTCCTCCCCAACCGATGTTAGACTTTGAGGGGAAGCCCAGAAGGGAAAGCCCTTAGGAGTTGAATGTCAATAATAAGATGCATTATTCGTCTAACTTGGTCGTTGGTCGTTGCATTCAGGAGACCGATGAACCTCTCCAACTAAACTGTAAGGGCTTTACTCTGGAGTTCATTTCAGCGTCGGATGGAAAGGAAGCCGTGGCGAGAGCAGCTAGTTTTCTTCTCAAAGACAAGTGGAGAAAAACCAACATGAGTGGAGATTCCAATCAGTGCTTTTCTGAATCTCAGATGACTGAGGCTCTAAAAGCAGTTGGTTTGTATTCTTGCTTATACTTGGAAAGTTTCAGAGTAATATTTACCTAAATGTAAATTAACCGTCCGGGTACTCTGTCATTAGGTTGTGGAGGGCCTGATCCTGACCTCATTTTAGTATACGGACCTTCAAGATGTCACTTAGGGTTTCCTGCTTGGAGAATCCGCTACACAGAGATTATGTGAGTCTTTTTGTTTATTATATTTTTTTCGATAATTAATCACATTTTTTATTTGTATGGATGCTCCACGTGTACAAACACCCAAACATCCTCTATATCCTTGCTTTAAACGTGTAACAACTCAAGCCTACCGCTAGCAGATATTGTCTACTTTAGGCCGTTACGTATAGCCATCAGTCATACGGTTTTAAAACGCGTTTACTAGGGAGAGGTTTCCACACCTTTACAAGGAATACTTCGTTCTCATCTCTAACCAATGTGGGATCTCACAAGAAGAGAAATCTCCTTTCTTTCTATCAACAGCTTGTAACGAAGGGTAGGGACTGATGCAACCCCAACTTCTTTGTGCTCTTCACTAGGAAGTGTCCACAATGGAATTGAATTAGAATGGCCATCATGCTTCATAAGATTTCAACAAAGACTAACCATGTATGCTTAAAAGGCCAAGTGGATTTAAGAAATGCCTCTCAGCTTTGAACTCCTGCAGCAATAGAATGTTAGGTTGCAAGTCCCTCAAAAAGCTCTCAACTCCACCCATTTTCGCTAAAGCCCTTAGCTTGCATGTTAATGTTCACATGTATGGGAATTTATCACAATTCATCCTATAACATAAATTTTCAGTTCCCTCTGACTTCTTGAGCTTGATCTATTTGTCTACTTCTCTTCTTCTTCTTTCCTTTTCTTTTTCTCTTTTTCCTAGTGTTTTTGGCCTTTTTCTGCCAATCTCTGCAGACGAGGTTTGAACTTTGAGAAAATTTAACGATGACTACTTTTCCACCTGCTTCTCCTCAAAAGAGACCAATTTCTTTCTTGCTTCTCCTCAAAAGGGACCAATTTCTTTCTTGTGAGACTTTTTAATTCAGGACCTCCTCCCAAATATCTTATCCGCGATTCGCTTTATAGATAGGCATTTTTATTGAGAATACTTAAGGTCCGTTTGTTTTTGTTTTGAAATCCCCAAGCTCTTACAAATCAAATTTGGGTACTACGGAGAAAAGCTAGCTGGATAAACAAGATAGGGATCGCCTGCCAACAATGCTACCTTGGAGAGGATATAAACCTAAGCACTTTAATATAAGAATGGAAACTTATATTCAAAAGCTTTTTCAATATATGAACAACTAACATGAATGAGTCAGCTTCAACACCACCGTTACTCTTAATCATAAACAGACTTGCACTGACCTCAATAGACATCAAAGGATGAACCTGGTCTGTCTGTCTATTTGGGACTTCTGGTAGCTACTTCTCAAATCCCTCTGCAAATGAGTTTTTTCTTTATTACTCCAACACGTCCTATGCTAGGAGTAGATACGACCCATCCACTGTATGATCATTCTGTGCTTTGGTTCTTCTCATTCCTCCAGTAGTAGAATAAATACTTTCTTCCAAAAGAGTAATGTTGTTTGTTATATTGAACATTTTTTGTTATTGTATGAGTGATATACTTACAGAAGATAAACTTTGATTTTTCCTTTAGTGGTCTAGTAAGCTTATTATGATGCTGTGTGGAATCTTCACTTCTGAAATAATTAATTTATGCATCTAAAACAACACAAATATGTATTAATATGCTTATTCCAACTTCACCAAAAAAAAAAAATCCACACATTTTTGTAATCATTTTTGGGGTTGAAGAGATTATATGATCTTTGATTTATATTTTGTTGCAGACACATGGGACCATTAAAGTCCAAGAAGTATGGTTCCCTGGTAAAAGCCATTTACAAGTTTACCATGGTGCGGCAAAACTACGGTGAGTAACTTGCTATTGCCTTAATAAGTTCTAGTGAAATCATGTGAGACCTGATAGCAGAAGTAGCCCTTTCAGTTCTAAACTTTTACTATTTTAGATATCAGCTTTGTCTCGTATTGGAATTTTTGAAAGTCATTTGGCTAGCTTAGCCATTGTGTAAACAAGGTTCTTACGCTTGGGTCTTGAATTTTAGAAGTGCTCTCGCTTACGATGGTGAGTTAAACGCTCAAATTTCAAAATTTTCTGTAATGGTCTAAGCCCACCCTTAGCAGATACTGTCCTCTTTGGATTTTCACTCCTGAGCTTTCCTTCAAGGTTTTTAAAACTTGTCTGCTAGGGAAAGATTTTCATACTCTTATAAAGAATGTTTTGTTCTTCTCCCCAACCGATGTGAGACCCCTAATCCACTCCCCCTTCAGAGCCCAGCGTCTTTGCTGGCACACCGCCTTGTGTCCACCCTCCTTTAGGGCTCAACCTCCTCGCTAGCACATCACCCGGTGTCTGGCTCTGATATCATTTGTAATAGCCTAGACCCACCACTAGCAAATATTGTCCTCTTTGGACATTCCCTTTCGAGCTTCCCCTTAAGATTTTTAAAACGCATTTCTTAGGGAGAGGTTTCCACACTCTTATTGTTTCTTAATACCTTAATCACTTGAATCGTTCTGAAATTGTGATCTTTCTCTTGTTTTTTTATACATCTGTTTCAATAGGTAAATGA ATGACCTTGAGAGGTGCGTTGTGGCTTGGCGGTTGTTTAGTTTCGCAGCTCACTTCATCGCTTTCTCTCCTCGGACCGATGACCATCAAGGTTGAGCTTCAGAAGATTGGAATTCTTGGGCTTCAGCTAATATGGATTTTCCTACACTTTATTGTTAGTTCATTCTACTTTTTGGTTAGTATTGCCATGACACTCGAAAGCTATTTGATCTCTTGTGGATTCCTACGCAAGTACAATCATCTGGATATCGACAGGGTCCAATATCTTGCCATTGTTGTTGAAAGTGATGAAGCTTATAATACCTTAAAAATTATTGAACTTCTGCAATGGTTAGAATCCATGGGCATTAGAAGTGTTTGTTTGTATGATGCTGAAGGGGTGCTTAAACAATCCAAGGATATCATTTTGAAGAAAGTAAAGAATGCATCGTTATTTCAGGAGACCGATGAACCTCTCCAACTAAACTGTAAGGGCTTTACTCTGGAGTTCATTTCAGCGTCGGATGGAAAGGAAGCCGTGGCGAGAGCAGCTAGTTTTCTTCTCAAAGACAAGTGGAGAAAAACCAACATGAGTGGAGATTCCAATCAGTGCTTTTCTGAATCTCAGATGACTGAGGCTCTAAAAGCAGTTGGTTGTGGAGGGCCTGATCCTGACCTCATTTTAGTATACGGACCTTCAAGATGTCACTTAGGGTTTCCTGCTTGGAGAATCCGCTACACAGAGATTATACACATGGGACCATTAAAGTCCAAGAAGTATGGTTCCCTGGTAAAAGCCATTTACAAGTTTACCATGGTGCGGCAAAACTACGGTAAATGA ATGACCTTGAGAGGTGCGTTGTGGCTTGGCGGTTGTTTAGTTTCGCAGCTCACTTCATCGCTTTCTCTCCTCGGACCGATGACCATCAAGGTTGAGCTTCAGAAGATTGGAATTCTTGGGCTTCAGCTAATATGGATTTTCCTACACTTTATTGTTAGTTCATTCTACTTTTTGGTTAGTATTGCCATGACACTCGAAAGCTATTTGATCTCTTGTGGATTCCTACGCAAGTACAATCATCTGGATATCGACAGGGTCCAATATCTTGCCATTGTTGTTGAAAGTGATGAAGCTTATAATACCTTAAAAATTATTGAACTTCTGCAATGGTTAGAATCCATGGGCATTAGAAGTGTTTGTTTGTATGATGCTGAAGGGGTGCTTAAACAATCCAAGGATATCATTTTGAAGAAAGTAAAGAATGCATCGTTATTTCAGGAGACCGATGAACCTCTCCAACTAAACTGTAAGGGCTTTACTCTGGAGTTCATTTCAGCGTCGGATGGAAAGGAAGCCGTGGCGAGAGCAGCTAGTTTTCTTCTCAAAGACAAGTGGAGAAAAACCAACATGAGTGGAGATTCCAATCAGTGCTTTTCTGAATCTCAGATGACTGAGGCTCTAAAAGCAGTTGGTTGTGGAGGGCCTGATCCTGACCTCATTTTAGTATACGGACCTTCAAGATGTCACTTAGGGTTTCCTGCTTGGAGAATCCGCTACACAGAGATTATACACATGGGACCATTAAAGTCCAAGAAGTATGGTTCCCTGGTAAAAGCCATTTACAAGTTTACCATGGTGCGGCAAAACTACGGTAAATGA MTLRGALWLGGCLVSQLTSSLSLLGPMTIKVELQKIGILGLQLIWIFLHFIVSSFYFLVSIAMTLESYLISCGFLRKYNHLDIDRVQYLAIVVESDEAYNTLKIIELLQWLESMGIRSVCLYDAEGVLKQSKDIILKKVKNASLFQETDEPLQLNCKGFTLEFISASDGKEAVARAASFLLKDKWRKTNMSGDSNQCFSESQMTEALKAVGCGGPDPDLILVYGPSRCHLGFPAWRIRYTEIIHMGPLKSKKYGSLVKAIYKFTMVRQNYGK Homology
BLAST of Csor.00g071350 vs. ExPASy Swiss-Prot
Match: Q96E22 (Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Homo sapiens OX=9606 GN=NUS1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-12 Identity = 51/205 (24.88%), Postives = 92/205 (44.88%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy Swiss-Prot
Match: Q99LJ8 (Dehydrodolichyl diphosphate synthase complex subunit Nus1 OS=Mus musculus OX=10090 GN=Nus1 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.7e-10 Identity = 54/201 (26.87%), Postives = 89/201 (44.28%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy Swiss-Prot
Match: Q9Y7K8 (Dehydrodolichyl diphosphate synthase complex subunit nus1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nus1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09 Identity = 47/203 (23.15%), Postives = 86/203 (42.36%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy Swiss-Prot
Match: Q12063 (Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NUS1 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 4.0e-04 Identity = 21/59 (35.59%), Postives = 30/59 (50.85%), Query Frame = 0
BLAST of Csor.00g071350 vs. NCBI nr
Match: KAG6605150.1 (Dehydrodolichyl diphosphate synthase complex subunit NUS1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 540 bits (1390), Expect = 2.12e-193 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Csor.00g071350 vs. NCBI nr
Match: XP_022947211.1 (dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 487 bits (1254), Expect = 4.41e-173 Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Csor.00g071350 vs. NCBI nr
Match: XP_023533531.1 (dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481 bits (1238), Expect = 1.21e-170 Identity = 241/246 (97.97%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Csor.00g071350 vs. NCBI nr
Match: XP_022947212.1 (dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 481 bits (1237), Expect = 1.66e-170 Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Csor.00g071350 vs. NCBI nr
Match: XP_023007520.1 (dehydrodolichyl diphosphate synthase complex subunit nus1-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 480 bits (1236), Expect = 2.44e-170 Identity = 239/246 (97.15%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy TrEMBL
Match: A0A6J1G5S6 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucurbita moschata OX=3662 GN=LOC111451147 PE=3 SV=1) HSP 1 Score: 487 bits (1254), Expect = 2.14e-173 Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy TrEMBL
Match: A0A6J1G5U4 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucurbita moschata OX=3662 GN=LOC111451147 PE=3 SV=1) HSP 1 Score: 481 bits (1237), Expect = 8.04e-171 Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy TrEMBL
Match: A0A6J1L369 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucurbita maxima OX=3661 GN=LOC111499983 PE=3 SV=1) HSP 1 Score: 480 bits (1236), Expect = 1.18e-170 Identity = 239/246 (97.15%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy TrEMBL
Match: A0A6J1L7W1 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucurbita maxima OX=3661 GN=LOC111499983 PE=3 SV=1) HSP 1 Score: 479 bits (1232), Expect = 7.74e-170 Identity = 238/246 (96.75%), Postives = 245/246 (99.59%), Query Frame = 0
BLAST of Csor.00g071350 vs. ExPASy TrEMBL
Match: A0A6J1L559 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucurbita maxima OX=3661 GN=LOC111499983 PE=3 SV=1) HSP 1 Score: 472 bits (1215), Expect = 2.91e-167 Identity = 237/246 (96.34%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Csor.00g071350 vs. TAIR 10
Match: AT1G11755.1 (Undecaprenyl pyrophosphate synthetase family protein ) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-59 Identity = 113/238 (47.48%), Postives = 169/238 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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