Csor.00g068050 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAGTAAGTTGACATGAAAACTGATAAAGCTTTGTATTATTTGTTCACAAACAGCTTACAATATTAGGATGTTCATAGAGCTCTTACCAATTAACGGTTTGTTCATGATCTTCAGATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTATAGTCTTGAAATCTCTTCACCTTCGTAGTCATACATCATCTCGCAATGCTGGATTTTATGTGACATCCTATATTGGTTAGAGAGGAAAACGAAACATTCTTTATAAGAATGTGGAAACCTCTCCCAGTTAGATGCTCTTTTAAAAACCTTGAGGGGAAATCCGGAATGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGTGCTTGGGCTGTTACAAATGGTATCAAAGCCAAACACCAGGCAGTGTGCTAGCGAGCTCCGAAGAGGGGGGATTATGAGATCCACATCAATCGGAGAAAGGAAGGGAAAACCCAAGAGGACTTAAAAGAGAGTCCCAAGGCTTTAGTACTATATATAAATGGCTTCAAAATGTTTATCCTCTTGTTATTTGGTTGGTAGGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGTAGGTAACTACTGCCCAAAGTTTTCGACATATGTGTGTGTAGGTGCTTGTCTGATTATTTGGCTGTTTACTTGGAACACAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGGTAAGTTAGTAATGGATTTGTTTATTGGCATAGGACAAAAGTGTAACAACCCTAGATTTCTACTAACCTAAAGCCGTTACCGTCATCATAATCTATACTCTTATGCGGAATTAAACATTTAATACTTCATCATAAAACACTACCATGGACTTATGTGTTCGAAAACATCTTTAAAACAACATAACGAAATGCTAAATGAAATAAACAAACAATAAAAGTAAAAACACCCTATGCTAACCTAAAGTCTAAGAAATAAAATACCACTATTCTATGCATATGTCATGGTCTTGACTTGCGATGTCGTTGTCAGCTAAACAGGGATGCATTGCCTTTATCTGATATAAAAGTAGCACACTGCTTGAGTATTTTAAGTGACCCCACTATTGGTATCAGGAAATGCAAACACATGCAACTCATTATTAAGGACTTATCGTGAAAACCATCATAGGGGTGACCTCCAGTTCGGACAAAATTGGATGTGTAGTACTTTTCTACACACGACCCACATGTGCGAGTGTGGATCCCTAAGTGTTTCGCACCCCCCTAGACCCATCATAGTCAAGCTAGCATTTGTAGCGATGTTCGGAGATCTGCAGACCTCGAGTGTCATGCGAGGCATGATCATCATCATCATAGTGTACACGTCTGTACTTATCATCATCATAGTGTACACGTCCGTATTCATCATTATAAATGGGGAAGTATCCCGATGTATGTAACAGTGGGCTTGCTGGGTTGGAGAACGAATCCCACATCGGTTGAGGTGGAGAACGAATCATTCTTTACATGGGTGTGGAAATGTTTCCCTAGCAGACACGTTTTACAAACCTTGAGGGAAAGTCCAAAAAAGGACAATATCGAATAGGAGTGGGGTTGCTGTTACAAAAGGGCTAGTTTTCTGAGTTACCAACTCACATAAGGCTTAAAACTTGCTACCATGGGCTATGAGGTGTTTTACTTTGAGTTGGTTTTGTATGCTTATTTGAACTTAGATTTTCTCATGTCTCGAACTATATTGCAGTGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAACATTTTGCTCATGCCTTTGCATGATTAATTGGTCAATATTGATATTGATACGTTTGATTACGAAAGTCAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGA ATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGTGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGA ATGATTCGGCTTCTTACTGAAACTCTGATGGGTATCATCTATAATAAATCGAACTCTAGTAGAGCCCTTGAAGGTCTGCATGGTGTTACTGTGGTGCCTGGTTCACAACAATTCGCCTTGGAAAAGGCTTCACGAGATGGGGATTTTTCTTCATTGAGTTGTGGGAGTTCATCAGCTTTAAGTGTGAATCAATGGGTATGGGAGCAGAGACCATCCTGTTTGAGACCTGTTGGGGGTTGTATACAAGGTGATCGGAATATGGCGGAGAGGGTGGCTAACGTGCTTACCTCACTTCCTTTTATTGCTCTTGGAATTCAGGCACCAAGGAAGAATTTCCCAACGAGGCTATATGCTAATTCATTGATTGGAGTAGGAGTTGCTTCAAGTTTATATCATTCTTCCAGAGGAAAATTGAGACAATACCTAAGATGGGCCGACTACACAATGATCGCTACAGCCACGGTGTGTCTGACAGGAGCTTTAAGAAACGACAACCCGAGGATGTTGATGGCTGCATCTGCATTTCTATTGCCTTTGAGGCCCTTTACGGTTTCAGCACTTCACACTGGGATGATGGAGGTAATGTTTGCAAAAAGAGCTTTGAAGGATCCAGATTTGAGGATGGCTCACAACGTGCATAAAGTGTCGACGCTGTTAGGTGGTGTTCTTTTCGTTGCTGATGATGCTTTGCCCCAAACTCCATTCATTCATGCAGCTTGGCATCTTGCTGCTGCTGTTGGTGTTGGAACCTGCAATAAGCTTCTTGAGTGA MIRLLTETLMGIIYNKSNSSRALEGLHGVTVVPGSQQFALEKASRDGDFSSLSCGSSSALSVNQWVWEQRPSCLRPVGGCIQGDRNMAERVANVLTSLPFIALGIQAPRKNFPTRLYANSLIGVGVASSLYHSSRGKLRQYLRWADYTMIATATVCLTGALRNDNPRMLMAASAFLLPLRPFTVSALHTGMMEVMFAKRALKDPDLRMAHNVHKVSTLLGGVLFVADDALPQTPFIHAAWHLAAAVGVGTCNKLLE Homology
BLAST of Csor.00g068050 vs. NCBI nr
Match: KAG6579250.1 (hypothetical protein SDJN03_23698, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 514 bits (1325), Expect = 5.00e-184 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of Csor.00g068050 vs. NCBI nr
Match: XP_022938939.1 (uncharacterized protein LOC111445000 [Cucurbita moschata]) HSP 1 Score: 506 bits (1302), Expect = 1.55e-180 Identity = 253/256 (98.83%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of Csor.00g068050 vs. NCBI nr
Match: XP_023549509.1 (uncharacterized protein LOC111807990 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505 bits (1300), Expect = 3.12e-180 Identity = 252/256 (98.44%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of Csor.00g068050 vs. NCBI nr
Match: XP_022993088.1 (uncharacterized protein LOC111489209 [Cucurbita maxima]) HSP 1 Score: 501 bits (1291), Expect = 7.36e-179 Identity = 250/256 (97.66%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of Csor.00g068050 vs. NCBI nr
Match: XP_022959909.1 (uncharacterized protein LOC111460821 [Cucurbita moschata] >KAG6601879.1 hypothetical protein SDJN03_07112, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447 bits (1151), Expect = 1.79e-157 Identity = 227/260 (87.31%), Postives = 242/260 (93.08%), Query Frame = 0
BLAST of Csor.00g068050 vs. ExPASy TrEMBL
Match: A0A6J1FFK6 (uncharacterized protein LOC111445000 OS=Cucurbita moschata OX=3662 GN=LOC111445000 PE=4 SV=1) HSP 1 Score: 506 bits (1302), Expect = 7.49e-181 Identity = 253/256 (98.83%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of Csor.00g068050 vs. ExPASy TrEMBL
Match: A0A6J1K156 (uncharacterized protein LOC111489209 OS=Cucurbita maxima OX=3661 GN=LOC111489209 PE=4 SV=1) HSP 1 Score: 501 bits (1291), Expect = 3.56e-179 Identity = 250/256 (97.66%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of Csor.00g068050 vs. ExPASy TrEMBL
Match: A0A6J1H9F5 (uncharacterized protein LOC111460821 OS=Cucurbita moschata OX=3662 GN=LOC111460821 PE=4 SV=1) HSP 1 Score: 447 bits (1151), Expect = 8.67e-158 Identity = 227/260 (87.31%), Postives = 242/260 (93.08%), Query Frame = 0
BLAST of Csor.00g068050 vs. ExPASy TrEMBL
Match: A0A6J1JJG8 (uncharacterized protein LOC111487494 OS=Cucurbita maxima OX=3661 GN=LOC111487494 PE=4 SV=1) HSP 1 Score: 445 bits (1145), Expect = 7.12e-157 Identity = 226/260 (86.92%), Postives = 241/260 (92.69%), Query Frame = 0
BLAST of Csor.00g068050 vs. ExPASy TrEMBL
Match: A0A5D3E3V3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00310 PE=4 SV=1) HSP 1 Score: 443 bits (1139), Expect = 5.84e-156 Identity = 223/261 (85.44%), Postives = 242/261 (92.72%), Query Frame = 0
BLAST of Csor.00g068050 vs. TAIR 10
Match: AT1G23110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-89 Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of Csor.00g068050 vs. TAIR 10
Match: AT1G23110.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-89 Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of Csor.00g068050 vs. TAIR 10
Match: AT1G23110.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-89 Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of Csor.00g068050 vs. TAIR 10
Match: AT1G23110.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1). ) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-89 Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of Csor.00g068050 vs. TAIR 10
Match: AT1G23110.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70900.1). ) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-89 Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|