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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTTACGACCGCCACCTACCTCGTCATGTCACCCAGAGAACGCGTGAGGGAGACGGCAGAGGTGTTTAAGAGGCGGCTCAGGGGGAGCTCCGTCGAGAACTTGGAAGAATACCCATTACCGCCAGTGAAGAAACAAGCCCAGTTTAGAGGCTATCCAACGAGAGTTGAGGCACCATCTCGGAGAGGAACCATCGCCGGAGTGTGCTCGAGGGGGGATGTTGGGCTAATTTTGGAGTTGAAACACCCAAAGACTCGAACCAAAGAGCTCGAATAA mRNA sequence ATGGTTACGACCGCCACCTACCTCGTCATGTCACCCAGAGAACGCGTGAGGGAGACGGCAGAGGTGTTTAAGAGGCGGCTCAGGGGGAGCTCCGTCGAGAACTTGGAAGAATACCCATTACCGCCAGTGAAGAAACAAGCCCAGTTTAGAGGCTATCCAACGAGAGTTGAGGCACCATCTCGGAGAGGAACCATCGCCGGAGTGTGCTCGAGGGGGGATGTTGGGCTAATTTTGGAGTTGAAACACCCAAAGACTCGAACCAAAGAGCTCGAATAA Coding sequence (CDS) ATGGTTACGACCGCCACCTACCTCGTCATGTCACCCAGAGAACGCGTGAGGGAGACGGCAGAGGTGTTTAAGAGGCGGCTCAGGGGGAGCTCCGTCGAGAACTTGGAAGAATACCCATTACCGCCAGTGAAGAAACAAGCCCAGTTTAGAGGCTATCCAACGAGAGTTGAGGCACCATCTCGGAGAGGAACCATCGCCGGAGTGTGCTCGAGGGGGGATGTTGGGCTAATTTTGGAGTTGAAACACCCAAAGACTCGAACCAAAGAGCTCGAATAA Protein sequence MVTTATYLVMSPRERVRETAEVFKRRLRGSSVENLEEYPLPPVKKQAQFRGYPTRVEAPSRRGTIAGVCSRGDVGLILELKHPKTRTKELE
Homology
BLAST of Csor.00g067970 vs. NCBI nr
Match: KAG6579258.1 (hypothetical protein SDJN03_23706, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179 bits (454), Expect = 1.30e-56 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 Query: 1 MVTTATYLVMSPRERVRETAEVFKRRLRGSSVENLEEYPLPPVKKQAQFRGYPTRVEAPS 60 MVTTATYLVMSPRERVRETAEVFKRRLRGSSVENLEEYPLPPVKKQAQFRGYPTRVEAPS Sbjct: 1 MVTTATYLVMSPRERVRETAEVFKRRLRGSSVENLEEYPLPPVKKQAQFRGYPTRVEAPS 60
Query: 61 RRGTIAGVCSRGDVGLILELKHPKTRTKELE 91 RRGTIAGVCSRGDVGLILELKHPKTRTKELE Sbjct: 61 RRGTIAGVCSRGDVGLILELKHPKTRTKELE 91
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6579258.1 | 1.30e-56 | 100.00 | hypothetical protein SDJN03_23706, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 87..91 |
Relationships
The following mRNA feature(s) are a part of this gene:
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