Csor.00g067660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTTTTCCCGGCAATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTACTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG ATGGTGGTTTTCCCGGCAATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTACTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG ATGGTGGTTTTCCCGGCAATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTACTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG MVVFPAMSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN Homology
BLAST of Csor.00g067660 vs. ExPASy Swiss-Prot
Match: Q9LUA1 (CLAVATA3/ESR (CLE)-related protein 27 OS=Arabidopsis thaliana OX=3702 GN=CLE27 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.4e-04 Identity = 27/81 (33.33%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of Csor.00g067660 vs. NCBI nr
Match: KAG6579278.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (542), Expect = 1.00e-69 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Csor.00g067660 vs. NCBI nr
Match: KAG7016789.1 (hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201 bits (512), Expect = 3.14e-65 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g067660 vs. NCBI nr
Match: KAG6601785.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032500.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103 bits (258), Expect = 1.35e-26 Identity = 59/94 (62.77%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Csor.00g067660 vs. NCBI nr
Match: KAA0063931.1 (putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 4.80e-24 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Csor.00g067660 vs. NCBI nr
Match: KAB1221059.1 (CLAVATA3/ESR (CLE)-related protein 43 [Morella rubra]) HSP 1 Score: 70.5 bits (171), Expect = 2.45e-13 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Csor.00g067660 vs. ExPASy TrEMBL
Match: A0A5A7VDX3 (Putative Clavata3/esr-related 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00690 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.32e-24 Identity = 55/95 (57.89%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Csor.00g067660 vs. ExPASy TrEMBL
Match: A0A6A1W705 (CLAVATA3/ESR (CLE)-related protein 43 OS=Morella rubra OX=262757 GN=CJ030_MR3G018956 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.19e-13 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Csor.00g067660 vs. ExPASy TrEMBL
Match: A0A0A0KR66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.50e-11 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of Csor.00g067660 vs. ExPASy TrEMBL
Match: A0A2N9G6I6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22693 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.03e-09 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Csor.00g067660 vs. ExPASy TrEMBL
Match: A0A061E6F8 (Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.73e-09 Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of Csor.00g067660 vs. TAIR 10
Match: AT3G25905.1 (CLAVATA3/ESR-RELATED 27 ) HSP 1 Score: 44.7 bits (104), Expect = 5.2e-05 Identity = 27/81 (33.33%), Postives = 40/81 (49.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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