Csor.00g067530 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g067530
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	F-box protein SKIP28
Location	Csor_Chr15: 6167974 .. 6169567 (+)
RNA-Seq Expression	Csor.00g067530
Synteny	Csor.00g067530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGAACAAGAAATTCCCAAATCAGGTGGCCGTCTGCGGCAGTTCCTCTCCCGGCGTTCGAATCGCGGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTATTTGAGCTTCTTTCCATGGGCGCCGTCTGCGTATCGCTAAGAGACGCAGTGGAACACGATGTGTTGCCATGGCTTCATCTCGTCGTCGATCGGCCCTTGAGCTCCCGGCTAAACGATTACATTCTGGGGCGAATTGCCCGAAAGGCCGATGGCCGCCTTCGAACCTTGGCTTTGATCAACTGCTTCAAGATTTCAGATTCTGCACTTCACCAAGTCGTTGAGAACAATCCCCTTCTCACCAAGGTATTTACATCTTCCTTTGAATGCTTGTGTTGATTGCTTAATCTAATCAATAATTTCTCCGTTTTTAGTTATAATATGTTAGGAATCTGTACGACAGTATGATATTGTTTAGATATTGTCCACTTTCAAGGTAAGCTACTTTGCTTTAAGCTTCTCAAAAAGGTCTTATTACTCCTGGAGATGTATTCTTTACTTCTAAATCCATGATCATTCCTTAACTTAGCTAACGTGGGACTCTATTCCAAACAATCTTCAACAATTCTCCCCTCAAACAAAGTACAAAGTACATTAAAGAGTCAGTCTCCCCTTAATCCAGGTCCGACTTCTTCTCTGGAGCCCTTGAACAATGTACACCCTTTGTTCGACGCTTAACTTTTGATGCTCACAATTTTTTGTTGGACATTTGAGGATTCTATTGACATAGCTAAGTTTAGGGCATGACTTTAATACCATGTTAAAAGTCACGATTCTTCACAATTGTACGAAACTTTTTGGAAAAACTTAAAGCAAATCCACGAGAGTCTATGCTCAAAGTGGATAATATCATACAACTATGGCGAGTCGTGATTCCTATCATTCCCTTTGCATCAAATTAAAACCTTAAAACAGAACATCTCAAGTATTTTCCTTGTTGATTCAGCTTTATGTACCTGGTTGCACGAGTTTGACTCCGGAGGGAGTGATTCGGGCAGTGGAGACTCTATCACAACATTCTCACAATTTGAATAGCCTAATGATTGGTGGCATTTACAACATAGAGAATGAACACCTTGAAGTCCTCAAGTACCATCTTCTCAAAAACCGATCGGAGCAGCAGCAACAGCAACAGCAACAACGTCGTCTGTACCACCACGAGCACATTGAGGCATCAAAGTTGTTGAGGAACGAATACGTGGCGATGATTGATGTAGAAATGTGCCCAAAATGCGAGGAGATAGGGAGAGTTTATGACTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGCAGAAATCTGGGGCAGAGTGCCGAGGTTGCAGTGGCTGCGTGCCAAGGTGCGAAGAATGTGGGGGATGCGTAGATGGTGATGAAACAGAGGAGGCTGTATGTGCGGGTATCTTGTGCACAAGTTGTTGGCTTCAGCTTCCCAAATGCAACCATTGTAATAGGCCATATTGCACGCGACACTGTCAGAATGTTGTAAGTAGCACTGCTGCTGGGTTTGTTTGTGAAGTTTGCATTGAAACTTAG

mRNA sequence

ATGTCTGAGAACAAGAAATTCCCAAATCAGGTGGCCGTCTGCGGCAGTTCCTCTCCCGGCGTTCGAATCGCGGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTATTTGAGCTTCTTTCCATGGGCGCCGTCTGCGTATCGCTAAGAGACGCAGTGGAACACGATGTGTTGCCATGGCTTCATCTCGTCGTCGATCGGCCCTTGAGCTCCCGGCTAAACGATTACATTCTGGGGCGAATTGCCCGAAAGGCCGATGGCCGCCTTCGAACCTTGGCTTTGATCAACTGCTTCAAGATTTCAGATTCTGCACTTCACCAAGTCGTTGAGAACAATCCCCTTCTCACCAAGCTTTATGTACCTGGTTGCACGAGTTTGACTCCGGAGGGAGTGATTCGGGCAGTGGAGACTCTATCACAACATTCTCACAATTTGAATAGCCTAATGATTGGTGGCATTTACAACATAGAGAATGAACACCTTGAAGTCCTCAAGTACCATCTTCTCAAAAACCGATCGGAGCAGCAGCAACAGCAACAGCAACAACGTCGTCTGTACCACCACGAGCACATTGAGGCATCAAAGTTGTTGAGGAACGAATACGTGGCGATGATTGATGTAGAAATGTGCCCAAAATGCGAGGAGATAGGGAGAGTTTATGACTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGCAGAAATCTGGGGCAGAGTGCCGAGGTTGCAGTGGCTGCGTGCCAAGGTGCGAAGAATGTGGGGGATGCGTAGATGGTGATGAAACAGAGGAGGCTGTATGTGCGGGTATCTTGTGCACAAGTTGTTGGCTTCAGCTTCCCAAATGCAACCATTGTAATAGGCCATATTGCACGCGACACTGTCAGAATGTTGTAAGTAGCACTGCTGCTGGGTTTGTTTGTGAAGTTTGCATTGAAACTTAG

Coding sequence (CDS)

ATGTCTGAGAACAAGAAATTCCCAAATCAGGTGGCCGTCTGCGGCAGTTCCTCTCCCGGCGTTCGAATCGCGGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTATTTGAGCTTCTTTCCATGGGCGCCGTCTGCGTATCGCTAAGAGACGCAGTGGAACACGATGTGTTGCCATGGCTTCATCTCGTCGTCGATCGGCCCTTGAGCTCCCGGCTAAACGATTACATTCTGGGGCGAATTGCCCGAAAGGCCGATGGCCGCCTTCGAACCTTGGCTTTGATCAACTGCTTCAAGATTTCAGATTCTGCACTTCACCAAGTCGTTGAGAACAATCCCCTTCTCACCAAGCTTTATGTACCTGGTTGCACGAGTTTGACTCCGGAGGGAGTGATTCGGGCAGTGGAGACTCTATCACAACATTCTCACAATTTGAATAGCCTAATGATTGGTGGCATTTACAACATAGAGAATGAACACCTTGAAGTCCTCAAGTACCATCTTCTCAAAAACCGATCGGAGCAGCAGCAACAGCAACAGCAACAACGTCGTCTGTACCACCACGAGCACATTGAGGCATCAAAGTTGTTGAGGAACGAATACGTGGCGATGATTGATGTAGAAATGTGCCCAAAATGCGAGGAGATAGGGAGAGTTTATGACTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGCAGAAATCTGGGGCAGAGTGCCGAGGTTGCAGTGGCTGCGTGCCAAGGTGCGAAGAATGTGGGGGATGCGTAGATGGTGATGAAACAGAGGAGGCTGTATGTGCGGGTATCTTGTGCACAAGTTGTTGGCTTCAGCTTCCCAAATGCAACCATTGTAATAGGCCATATTGCACGCGACACTGTCAGAATGTTGTAAGTAGCACTGCTGCTGGGTTTGTTTGTGAAGTTTGCATTGAAACTTAG

Protein sequence

MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEHDVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQNVVSSTAAGFVCEVCIET

Homology

[Close]

BLAST of Csor.00g067530 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-56
Identity = 121/297 (40.74%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 29  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVEHDVLPWLHLVVDRPLSSRLNDYILGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  LV++ PLSSRL D IL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHS 148
            K+ G+L+TL L  C  +++  L +VV+ NPL+TK+ VPGC+ LTPEG++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLRNEYV 208
           H L +L I G+     +HL  L  +L                                  
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYLSSE------------------------------- 196

Query: 209 AMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE 268
             ID+E+CPKC+E+  +  CSRE C  KQ      +CRGC  C+PRC EC  C+ G +TE
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQR-----KCRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 --EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VVSSTAAGFVCEVC 315
             EA C    +LC  CWL LPKC  CN+PYCT H           +++   F CE C
Sbjct: 257 SQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRPSFECEAC 277

[Close]

BLAST of Csor.00g067530 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.6e-34
Identity = 87/258 (33.72%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 29  HEALFLVLSYLPLFELLSMGAVCVSLRDAVEHDVLPWLHLVVDRPLSSRLNDYILGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W H+ + RPL+ ++ +  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L +VV  N  + K+ VPGCT +T +G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLRNEYV 208
             +  L + G++ +  +H + L    L N   + +Q  Q+ R YH         +  +  
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELID--LLNIDNKVKQTIQKPRFYH----RGEACVSCDDD 380

Query: 209 AMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE 268
             +D+EMCPKC+    VYDC  E CK K  +K   ECR CS C+ RC  CG C+   E E
Sbjct: 381 RALDIEMCPKCQNFKLVYDCPAEDCKGK--KKGSEECRACSLCIQRCYHCGRCIIDTEYE 440

Query: 269 EAVCAGILCTSCWLQLPK 286
           E  C  +LC  C    PK
Sbjct: 441 EMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Csor.00g067530 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-27
Identity = 89/257 (34.63%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 26  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEHDVLPWLHL-VVDRPLSSRLNDYILG 85
           G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  + + D  L  R+ D  L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 86  RIARKADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETL- 145
           ++ R+A G +R L L  C  I+D  L QV+ +NP LTKL V GC  L+  G++  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 146 SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLR 205
           S +   + SL+ GG      E  + L  +LL     +   Q++++R Y      +   L 
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKEL--NLLLGGDAKVGLQERKKRFY--TSCRSEFYLE 304

Query: 206 NEYVAMIDVEMCPKCEEIGRVYDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVD 265
           ++ V   D+E+CP CE+   V+DC  + C +K Q   S + CR C  C+ RC ECG C++
Sbjct: 305 DDRVT--DLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLN 364

Query: 266 GDETEEAVCAGILCTSC 280
            D   +  C    C  C
Sbjct: 365 -DCENKPFCFAFSCVVC 374

[Close]

BLAST of Csor.00g067530 vs. NCBI nr
Match: KAG6579265.1 (F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648 bits (1672), Expect = 7.13e-235
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS
Sbjct: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           VVSSTAAGFVCEVCIET
Sbjct: 301 VVSSTAAGFVCEVCIET 317

[Close]

BLAST of Csor.00g067530 vs. NCBI nr
Match: XP_022939676.1 (F-box protein SKIP28 [Cucurbita moschata])

HSP 1 Score: 630 bits (1624), Expect = 1.43e-227
Identity = 309/317 (97.48%), Postives = 313/317 (98.74%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSEN KFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV H
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALH+VVENNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS Q
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS-Q 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQRRLYHHEHIEASKLLRN+YVAMIDVEMCPKC+EIGRVYDCSRERCKIKQEQKS
Sbjct: 181 QQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKS 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           V SS+AAGFVCEVCIET
Sbjct: 301 VGSSSAAGFVCEVCIET 316

[Close]

BLAST of Csor.00g067530 vs. NCBI nr
Match: XP_023551551.1 (F-box protein SKIP28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612 bits (1579), Expect = 1.04e-220
Identity = 301/317 (94.95%), Postives = 310/317 (97.79%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFE+LSMGAVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFEILSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHL VDRPLSSRLNDYIL RIARKADGRLRTLALINCFKISDSALH+VVENNPLL
Sbjct: 61  DVLPWLHLAVDRPLSSRLNDYILERIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKN S+Q
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNGSQQ 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQRRLYH ++IEA KLLRNEY+AMIDVEMCPKC+EIG+VYDCSRERCKIKQEQ S
Sbjct: 181 QQQQQQQRRLYH-KYIEAWKLLRNEYMAMIDVEMCPKCQEIGKVYDCSRERCKIKQEQNS 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRH QN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHRQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           VVSS+AAGFVCEVCIET
Sbjct: 301 VVSSSAAGFVCEVCIET 316

[Close]

BLAST of Csor.00g067530 vs. NCBI nr
Match: XP_022973574.1 (F-box protein SKIP28 [Cucurbita maxima])

HSP 1 Score: 607 bits (1564), Expect = 2.08e-218
Identity = 296/317 (93.38%), Postives = 308/317 (97.16%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSENKKFPNQVAVCGSSSPGV IAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVGIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALH+VV+NNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVQNNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKY+LLKNRS+Q
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYYLLKNRSQQ 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQ+R  +H+ IEASKLLRNE VAMIDVEMCPKC+E+GRVYDCSRERCKIKQEQK 
Sbjct: 181 QQQQQQQQRRLYHKDIEASKLLRNECVAMIDVEMCPKCQEMGRVYDCSRERCKIKQEQKF 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVC G+LCTSCWLQLPKCNHCN+PYCTRH QN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCVGVLCTSCWLQLPKCNHCNKPYCTRHRQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           V SS+AAGFVCEVCIET
Sbjct: 301 VASSSAAGFVCEVCIET 317

[Close]

BLAST of Csor.00g067530 vs. NCBI nr
Match: KAG7016781.1 (F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 603 bits (1554), Expect = 4.44e-217
Identity = 299/317 (94.32%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TK            GVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNR +Q
Sbjct: 121 TK------------GVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRLQQ 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQ+ RLYHHEHIEASKLLRNEYVAMIDVEMCPKC+EIGRVYDCSRERCKIKQEQKS
Sbjct: 181 QQQQQQKCRLYHHEHIEASKLLRNEYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKS 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           VVSS+AAGFVCEVCIET
Sbjct: 301 VVSSSAAGFVCEVCIET 305

[Close]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL
Match: A0A6J1FGL5 (F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 6.92e-228
Identity = 309/317 (97.48%), Postives = 313/317 (98.74%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSEN KFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAV H
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALH+VVENNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS Q
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRS-Q 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQRRLYHHEHIEASKLLRN+YVAMIDVEMCPKC+EIGRVYDCSRERCKIKQEQKS
Sbjct: 181 QQQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKS 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           V SS+AAGFVCEVCIET
Sbjct: 301 VGSSSAAGFVCEVCIET 316

[Close]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL
Match: A0A6J1IEZ1 (F-box protein SKIP28 OS=Cucurbita maxima OX=3661 GN=LOC111472110 PE=4 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.01e-218
Identity = 296/317 (93.38%), Postives = 308/317 (97.16%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSENKKFPNQVAVCGSSSPGV IAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVGIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALH+VV+NNPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVQNNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKY+LLKNRS+Q
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYYLLKNRSQQ 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           QQQQQQQ+R  +H+ IEASKLLRNE VAMIDVEMCPKC+E+GRVYDCSRERCKIKQEQK 
Sbjct: 181 QQQQQQQQRRLYHKDIEASKLLRNECVAMIDVEMCPKCQEMGRVYDCSRERCKIKQEQKF 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
           GAECRGCSGCVPRCEECGGCVDGDETEEAVC G+LCTSCWLQLPKCNHCN+PYCTRH QN
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCVGVLCTSCWLQLPKCNHCNKPYCTRHRQN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           V SS+AAGFVCEVCIET
Sbjct: 301 VASSSAAGFVCEVCIET 317

[Close]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL
Match: A0A5A7TYB5 (F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00470 PE=4 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 9.25e-162
Identity = 228/317 (71.92%), Postives = 262/317 (82.65%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSEN++ PN  AV           AGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI+CFKISDS LH+VVENNPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTP GV+RAV+T SQHSHNL +LMIGGIYNIEN HLEVL+ HLL+NRS+ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           +QQ+ +Q    +HEH++   LL N+++ +IDV++CPKC +I  VYDCSRERCKIKQ +  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
            A+CRGC  C+PRCEECGGCVD DE EEA+C GI+C+SCWLQLPKCNHCNRPYC RH  N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 300

Query: 301 VVSSTAAGFVCEVCIET 317
           V SSTA GFVCE+C+ET
Sbjct: 301 VSSSTA-GFVCEICLET 307

[Close]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL
Match: A0A0A0KSU6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 7.48e-161
Identity = 226/317 (71.29%), Postives = 264/317 (83.28%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSEN++ PN  +V           AGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEH
Sbjct: 30  MSENQEPPNPASVA---------EAGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEH 89

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALINCFKISDS LH+VVENNPLL
Sbjct: 90  DVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLL 149

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTPEGV+RAV+TLSQ SHNL +LMIGGIYNIEN+HLEVL+ HLL+NRS  
Sbjct: 150 TKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN 209

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           +QQ+ +Q    +HEH++  +LL ++++ +IDV++CPKC +I  VYDCSRERCKIKQ +  
Sbjct: 210 KQQEWRQVHHLYHEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENL 269

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
            A+CRGC  C+PRCEECGGCVD DE EEA+C+ ILC+SCW QLPKCNHCNRPYC RH  N
Sbjct: 270 LADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN 329

Query: 301 VVSSTAAGFVCEVCIET 317
           V SSTA GFVCE+C+ET
Sbjct: 330 VSSSTA-GFVCEICLET 336

[Close]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL
Match: A0A1S4E4Z1 (F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 1.40e-152
Identity = 215/301 (71.43%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60
           MSEN++ PN  AV           AGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120
           DVLPWLH+VVD  LSSRL+DY LGRIARKA GRLRTLALI+CFKISDS LH+VVENNPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQ 180
           TKLYVPGCTSLTP GV+RAV+T SQHSHNL +LMIGGIYNIEN HLEVL+ HLL+NRS+ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQQQQRRLYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKS 240
           +QQ+ +Q    +HEH++   LL N+++ +IDV++CPKC +I  VYDCSRERCKIKQ +  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300
            A+CRGC  C+PRCEECGGCVD DE EEA+C GI+C+SCWLQLPKCNHCNRPYC RH  N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 292

[Close]

BLAST of Csor.00g067530 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-57
Identity = 121/297 (40.74%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 29  HEALFLVLSYL-PLFELLSMGAVCVSLRDAVEHDVLPWLHLVVDRPLSSRLNDYILGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  LV++ PLSSRL D IL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETLSQHS 148
            K+ G+L+TL L  C  +++  L +VV+ NPL+TK+ VPGC+ LTPEG++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLRNEYV 208
           H L +L I G+     +HL  L  +L                                  
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYLSSE------------------------------- 196

Query: 209 AMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE 268
             ID+E+CPKC+E+  +  CSRE C  KQ      +CRGC  C+PRC EC  C+ G +TE
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQR-----KCRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 --EAVCAG--ILCTSCWLQLPKCNHCNRPYCTRHCQN------VVSSTAAGFVCEVC 315
             EA C    +LC  CWL LPKC  CN+PYCT H           +++   F CE C
Sbjct: 257 SQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRPSFECEAC 277

[Close]

BLAST of Csor.00g067530 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 146.4 bits (368), Expect = 4.0e-35
Identity = 87/258 (33.72%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 29  HEALFLVLSYLPLFELLSMGAVCVSLRDAVEHDVLPWLHLVVDRPLSSRLNDYILGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W H+ + RPL+ ++ +  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L +VV  N  + K+ VPGCT +T +G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLRNEYV 208
             +  L + G++ +  +H + L    L N   + +Q  Q+ R YH         +  +  
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELID--LLNIDNKVKQTIQKPRFYH----RGEACVSCDDD 380

Query: 209 AMIDVEMCPKCEEIGRVYDCSRERCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETE 268
             +D+EMCPKC+    VYDC  E CK K  +K   ECR CS C+ RC  CG C+   E E
Sbjct: 381 RALDIEMCPKCQNFKLVYDCPAEDCKGK--KKGSEECRACSLCIQRCYHCGRCIIDTEYE 440

Query: 269 EAVCAGILCTSCWLQLPK 286
           E  C  +LC  C    PK
Sbjct: 441 EMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Csor.00g067530 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-28
Identity = 89/257 (34.63%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 26  GPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEHDVLPWLHL-VVDRPLSSRLNDYILG 85
           G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  + + D  L  R+ D  L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 86  RIARKADGRLRTLALINCFKISDSALHQVVENNPLLTKLYVPGCTSLTPEGVIRAVETL- 145
           ++ R+A G +R L L  C  I+D  L QV+ +NP LTKL V GC  L+  G++  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 146 SQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSEQQQQQQQQRRLYHHEHIEASKLLR 205
           S +   + SL+ GG      E  + L  +LL     +   Q++++R Y      +   L 
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKEL--NLLLGGDAKVGLQERKKRFY--TSCRSEFYLE 304

Query: 206 NEYVAMIDVEMCPKCEEIGRVYDCSRERCKIK-QEQKSGAECRGCSGCVPRCEECGGCVD 265
           ++ V   D+E+CP CE+   V+DC  + C +K Q   S + CR C  C+ RC ECG C++
Sbjct: 305 DDRVT--DLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLN 364

Query: 266 GDETEEAVCAGILCTSC 280
            D   +  C    C  C
Sbjct: 365 -DCENKPFCFAFSCVVC 374

The following BLAST results are available for this feature:

BLAST of Csor.00g067530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU90	2.4e-56	40.74	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9LU91	5.6e-34	33.72	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	5.1e-27	34.63	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]

BLAST of Csor.00g067530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579265.1	7.13e-235	100.00	F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939676.1	1.43e-227	97.48	F-box protein SKIP28 [Cucurbita moschata]	[more]
XP_023551551.1	1.04e-220	94.95	F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973574.1	2.08e-218	93.38	F-box protein SKIP28 [Cucurbita maxima]	[more]
KAG7016781.1	4.44e-217	94.32	F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g067530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGL5	6.92e-228	97.48	F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1	[more]
A0A6J1IEZ1	1.01e-218	93.38	F-box protein SKIP28 OS=Cucurbita maxima OX=3661 GN=LOC111472110 PE=4 SV=1	[more]
A0A5A7TYB5	9.25e-162	71.92	F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KSU6	7.48e-161	71.29	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 ...	[more]
A0A1S4E4Z1	1.40e-152	71.43	F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=...	[more]

BLAST of Csor.00g067530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01620.1	1.7e-57	40.74	RNI-like superfamily protein	[more]
AT3G26000.1	4.0e-35	33.72	Ribonuclease inhibitor	[more]
AT3G27290.1	3.6e-28	34.63	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 28..65 e-value: 8.3E-4 score: 19.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 26..230 e-value: 1.1E-12 score: 49.5
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 24..314
None	No IPR available	PANTHER	PTHR13382:SF16	F-BOX PROTEIN SKIP28	coord: 24..314
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 88..176
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 244..255
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 28..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g067530.m01	Csor.00g067530.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding