Csor.00g066330 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g066330
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor TCP18-like isoform X1
Location	Csor_Chr13: 10570132 .. 10571135 (+)
RNA-Seq Expression	Csor.00g066330
Synteny	Csor.00g066330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTCTCCACCAAAAATGATGATGATGATGATCATGACCATTCATTTCATCTCCCCATCTCTTTCTTCCCCTTTCCTTCTCCTTTTGAAGTTGATGAACAATATGATGATCAACTTCACAATTTCACTACTAATTCTCAGAAGAATTTTACCATTCCAAGTCCTGACAACATTGTTGCCTCAAACAAGAAGATGGGCATTGGAAATTCAGATCAAAAGAAGCTCAAAATCCCAAGAAAAAGACTGTCCAAAAAGGACAGACATAGCAAAATCACCACAGCTCGAGGGTTAAGAGACCGTAGAATGAGGCTCTCACTGCCAGTAGCTCGTCAGTTCTTTGGGTTACAAGATTTGTTGGGTGTTGACAAAGGTAGCAAAACAGTTGAATGGCTGCTCACTCAAGCCAGCCCTGAAATTTTGAAACTTGCAAAGCAAAGAAATTGCAGCCATATCATTACTACTACTGTTTGTTCTAATTCCAATTCCTCCGAGGCTGACATGGTGTCTGGAATTGATGAAGTTGGCGGCGGAGGAGGAGGACCTAAAAAGATGAACTCTTGTTCTTTGAAGAGGAAAAGAGACAAACAGCCAAGAAGAACCATGTGCAAGGAATTGAGACAAAAGGCCAGGGAACGAGCCAGGGCAAGAACAATGGAGAAGAAAAATCAAATCTTTAAGGATTGTTCAGATCACCATCATCCAAATCACAACAAGATTTCATCTTGTTCTTGGAGCAGCCCCTTTGAAACTTGTGGGGAAGAATCAGGAGGTACTCACAGCTACAATTTCAACCCTTCCATGGAGGTTGAAAACTTGTGTTCCTTTGAGATTATGACAAAATGGAGCCCATCAATTTCCTCTTTAAATTTTCTTCAACCGGTGAGTGTGTATATATATATATATATATATATTAAAGTTTGTAACTTTCTTTGATTTTGACCTAAACCCACTTGATTTTTATGCAGCAGCATGAATTTGAAGACACTGATATCTTTGGATAA

mRNA sequence

ATGTTCTTCTCCACCAAAAATGATGATGATGATGATCATGACCATTCATTTCATCTCCCCATCTCTTTCTTCCCCTTTCCTTCTCCTTTTGAAGTTGATGAACAATATGATGATCAACTTCACAATTTCACTACTAATTCTCAGAAGAATTTTACCATTCCAAGTCCTGACAACATTGTTGCCTCAAACAAGAAGATGGGCATTGGAAATTCAGATCAAAAGAAGCTCAAAATCCCAAGAAAAAGACTGTCCAAAAAGGACAGACATAGCAAAATCACCACAGCTCGAGGGTTAAGAGACCGTAGAATGAGGCTCTCACTGCCAGTAGCTCGTCAGTTCTTTGGGTTACAAGATTTGTTGGGTGTTGACAAAGGTAGCAAAACAGTTGAATGGCTGCTCACTCAAGCCAGCCCTGAAATTTTGAAACTTGCAAAGCAAAGAAATTGCAGCCATATCATTACTACTACTGTTTGTTCTAATTCCAATTCCTCCGAGGCTGACATGGTGTCTGGAATTGATGAAGTTGGCGGCGGAGGAGGAGGACCTAAAAAGATGAACTCTTGTTCTTTGAAGAGGAAAAGAGACAAACAGCCAAGAAGAACCATGTGCAAGGAATTGAGACAAAAGGCCAGGGAACGAGCCAGGGCAAGAACAATGGAGAAGAAAAATCAAATCTTTAAGGATTGTTCAGATCACCATCATCCAAATCACAACAAGATTTCATCTTGTTCTTGGAGCAGCCCCTTTGAAACTTGTGGGGAAGAATCAGGAGGTACTCACAGCTACAATTTCAACCCTTCCATGGAGGTTGAAAACTTGTGTTCCTTTGAGATTATGACAAAATGGAGCCCATCAATTTCCTCTTTAAATTTTCTTCAACCGCAGCATGAATTTGAAGACACTGATATCTTTGGATAA

Coding sequence (CDS)

ATGTTCTTCTCCACCAAAAATGATGATGATGATGATCATGACCATTCATTTCATCTCCCCATCTCTTTCTTCCCCTTTCCTTCTCCTTTTGAAGTTGATGAACAATATGATGATCAACTTCACAATTTCACTACTAATTCTCAGAAGAATTTTACCATTCCAAGTCCTGACAACATTGTTGCCTCAAACAAGAAGATGGGCATTGGAAATTCAGATCAAAAGAAGCTCAAAATCCCAAGAAAAAGACTGTCCAAAAAGGACAGACATAGCAAAATCACCACAGCTCGAGGGTTAAGAGACCGTAGAATGAGGCTCTCACTGCCAGTAGCTCGTCAGTTCTTTGGGTTACAAGATTTGTTGGGTGTTGACAAAGGTAGCAAAACAGTTGAATGGCTGCTCACTCAAGCCAGCCCTGAAATTTTGAAACTTGCAAAGCAAAGAAATTGCAGCCATATCATTACTACTACTGTTTGTTCTAATTCCAATTCCTCCGAGGCTGACATGGTGTCTGGAATTGATGAAGTTGGCGGCGGAGGAGGAGGACCTAAAAAGATGAACTCTTGTTCTTTGAAGAGGAAAAGAGACAAACAGCCAAGAAGAACCATGTGCAAGGAATTGAGACAAAAGGCCAGGGAACGAGCCAGGGCAAGAACAATGGAGAAGAAAAATCAAATCTTTAAGGATTGTTCAGATCACCATCATCCAAATCACAACAAGATTTCATCTTGTTCTTGGAGCAGCCCCTTTGAAACTTGTGGGGAAGAATCAGGAGGTACTCACAGCTACAATTTCAACCCTTCCATGGAGGTTGAAAACTTGTGTTCCTTTGAGATTATGACAAAATGGAGCCCATCAATTTCCTCTTTAAATTTTCTTCAACCGCAGCATGAATTTGAAGACACTGATATCTTTGGATAA

Protein sequence

MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHNKISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEFEDTDIFG

Homology

[Close]

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot
Match: A1YKT1 (Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21
Identity = 95/258 (36.82%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 10  DDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIVASNKKMGIG 69
           +D+H  S H P++      P E  E       N   +SQ+                  I 
Sbjct: 97  NDNHHPSLHFPLNNTIVEQPTEPSETI-----NLIEDSQR------------------IS 156

Query: 70  NSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTV 129
            S   K+K   K+ S+ DRHSKI TA+G RDRRMRLSL VA++ FGLQD+LG DK SKTV
Sbjct: 157 TSQDPKMK-KAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTV 216

Query: 130 EWLLTQASPEILKLA---KQRNC------SHI--ITTTVCSNSNSSEADMVSGIDEVGGG 189
           EWLLTQA PEI+K+A       C      SHI  +  ++ ++S+  E   +  +D+ G  
Sbjct: 217 EWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDRGSN 276

Query: 190 GGGPK----KMNSCSLKRKRDKQPRRT-----MCKELRQKARERARARTMEK-------K 241
               +    K++  S++ KR +   RT     + KE R KARERA+ RTMEK       +
Sbjct: 277 TNTTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGR 329

[Close]

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot
Match: Q93WI2 (Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 9.3e-18
Identity = 68/155 (43.87%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 84  SKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKL 143
           ++KDRHSKI TA G+RDRRMRLSL VAR+FF LQD+LG DK SKTV+WLL  +   I ++
Sbjct: 113 ARKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNTSKSAIQEI 172

Query: 144 AKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKR--------- 203
                 S  +       S+S   D      E  GGGG  K   +C  + K+         
Sbjct: 173 MADDASSECVE----DGSSSLSVDGKHNPAEQLGGGGDQKPKGNCRGEGKKPAKASKAAA 232

Query: 204 -DKQPRRTM-------CKELRQKARERARARTMEK 222
             K PR++         KE R KARERAR RT EK
Sbjct: 233 TPKPPRKSANNAHQVPDKETRAKARERARERTKEK 263

[Close]

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot
Match: Q8LN68 (Transcription factor TB1 OS=Oryza sativa subsp. japonica OX=39947 GN=TB1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.0e-17
Identity = 66/154 (42.86%), Postives = 80/154 (51.95%), Query Frame = 0


Query: 84  SKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKL 143
           ++KDRHSKI+TA G+RDRRMRLSL VAR+FF LQD+LG DK SKTV+WLL  +   I ++
Sbjct: 114 ARKDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREI 173

Query: 144 AKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQPRRTMC 203
                 S        S S   +    S   + GGG G  K         K+  +PRR   
Sbjct: 174 MSDDASSVCEEDGSSSLSVDGKQQQHSNPADRGGGAGDHKGAAHGHSDGKKPAKPRRAAA 233

Query: 204 ----------------KELRQKARERARARTMEK 222
                           KE R KARERAR RT EK
Sbjct: 234 NPKPPRRLANAHPVPDKESRAKARERARERTKEK 267

[Close]

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-16
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 79  PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASP 138
           P K+  KKDRHSKI T++G RDRR+RLS+ +AR+FF LQ++LG DK SKT++WLLT++  
Sbjct: 73  PTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKT 132

Query: 139 EILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP 198
            I +L + +      +T   S+S   + + V  +D          K    + K K     
Sbjct: 133 AIKELVQSK------STKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDS 192

Query: 199 RRTMCKELRQKARERARARTMEK 222
            +   KE R KAR RAR RT EK
Sbjct: 193 HQAAAKESRAKARARARERTKEK 209

[Close]

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-16
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 79  PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASP 138
           P K+  KKDRHSKI T++G RDRR+RLS+ +AR+FF LQ++LG DK SKT++WLLT++  
Sbjct: 81  PTKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKT 140

Query: 139 EILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP 198
            I +L + +      +T   S+S   + + V  +D          K    + K K     
Sbjct: 141 AIKELVQSK------STKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDS 200

Query: 199 RRTMCKELRQKARERARARTMEK 222
            +   KE R KAR RAR RT EK
Sbjct: 201 HQAAAKESRAKARARARERTKEK 217

[Close]

BLAST of Csor.00g066330 vs. NCBI nr
Match: KAG6584372.1 (Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019957.1 Transcription factor TCP18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 607 bits (1566), Expect = 4.05e-219
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIV 60
           MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIV
Sbjct: 1   MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIV 60

Query: 61  ASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120
           ASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL
Sbjct: 61  ASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120

Query: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGG 180
           GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGG
Sbjct: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGG 180

Query: 181 GPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHNKI 240
           GPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHNKI
Sbjct: 181 GPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHNKI 240

Query: 241 SSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEFED 300
           SSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEFED
Sbjct: 241 SSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEFED 300

Query: 301 TDIFG 305
           TDIFG
Sbjct: 301 TDIFG 305

[Close]

BLAST of Csor.00g066330 vs. NCBI nr
Match: XP_022923891.1 (transcription factor TCP18-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 597 bits (1539), Expect = 5.70e-215
Identity = 302/307 (98.37%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKK+GIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKVGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300

Query: 301 EDTDIFG 305
           EDTD+FG
Sbjct: 301 EDTDMFG 307

[Close]

BLAST of Csor.00g066330 vs. NCBI nr
Match: XP_023520103.1 (transcription factor TCP18-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 591 bits (1523), Expect = 1.57e-212
Identity = 299/307 (97.39%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTN QKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNPQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPR+ MCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRKPMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300

Query: 301 EDTDIFG 305
           EDT +FG
Sbjct: 301 EDTQMFG 307

[Close]

BLAST of Csor.00g066330 vs. NCBI nr
Match: XP_022923892.1 (transcription factor TCP18-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 590 bits (1522), Expect = 2.15e-212
Identity = 301/307 (98.05%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKK+GIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKVGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP HEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP-HEF 300

Query: 301 EDTDIFG 305
           EDTD+FG
Sbjct: 301 EDTDMFG 306

[Close]

BLAST of Csor.00g066330 vs. NCBI nr
Match: XP_023520104.1 (transcription factor TCP18-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584 bits (1506), Expect = 5.89e-210
Identity = 298/307 (97.07%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTN QKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNPQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPR+ MCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRKPMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP HEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP-HEF 300

Query: 301 EDTDIFG 305
           EDT +FG
Sbjct: 301 EDTQMFG 306

[Close]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL
Match: A0A6J1E7Y5 (transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 597 bits (1539), Expect = 2.76e-215
Identity = 302/307 (98.37%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKK+GIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKVGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300

Query: 301 EDTDIFG 305
           EDTD+FG
Sbjct: 301 EDTDMFG 307

[Close]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL
Match: A0A6J1E7D2 (transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 590 bits (1522), Expect = 1.04e-212
Identity = 301/307 (98.05%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDH--SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60
           MFFSTKNDDD DHDH  SFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN
Sbjct: 1   MFFSTKNDDDHDHDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDN 60

Query: 61  IVASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120
           IVASNKK+GIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD
Sbjct: 61  IVASNKKVGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQD 120

Query: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180
           LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG
Sbjct: 121 LLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGG 180

Query: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240
           GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN
Sbjct: 181 GGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHHPNHN 240

Query: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQPQHEF 300
           KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP HEF
Sbjct: 241 KISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFLQP-HEF 300

Query: 301 EDTDIFG 305
           EDTD+FG
Sbjct: 301 EDTDMFG 306

[Close]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL
Match: A0A6J1KJS3 (transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495251 PE=4 SV=1)

HSP 1 Score: 550 bits (1416), Expect = 1.66e-196
Identity = 286/313 (91.37%), Postives = 294/313 (93.93%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIV 60
           MFFSTKNDDD  HDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNS++ FT PSPDN++
Sbjct: 1   MFFSTKNDDD--HDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSERIFTTPSPDNVL 60

Query: 61  ASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120
           ASN  MGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL
Sbjct: 61  ASNNNMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120

Query: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNS------SEADMVSGIDE 180
           GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNS      SEADMVSGIDE
Sbjct: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSNSNSNSSEADMVSGIDE 180

Query: 181 VGGGGGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHH 240
           VGGGG  PKK+NSCSLKRKRDKQPR+TMCKELRQKARERARARTMEKKNQIFKDCSDHHH
Sbjct: 181 VGGGG--PKKINSCSLKRKRDKQPRKTMCKELRQKARERARARTMEKKNQIFKDCSDHHH 240

Query: 241 --PNHNKISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFL 300
             PNHNKISSCSWSSPFET GEESG THSYNFNP+ME ENLCSFEIMTKWSPSISSLNFL
Sbjct: 241 HHPNHNKISSCSWSSPFETGGEESGATHSYNFNPAMEDENLCSFEIMTKWSPSISSLNFL 300

Query: 301 QPQHEFEDTDIFG 305
           QPQHEFEDT+IFG
Sbjct: 301 QPQHEFEDTNIFG 309

[Close]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL
Match: A0A6J1KF56 (transcription factor TCP18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495251 PE=4 SV=1)

HSP 1 Score: 543 bits (1399), Expect = 6.23e-194
Identity = 285/313 (91.05%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MFFSTKNDDDDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIV 60
           MFFSTKNDDD  HDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNS++ FT PSPDN++
Sbjct: 1   MFFSTKNDDD--HDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSERIFTTPSPDNVL 60

Query: 61  ASNKKMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120
           ASN  MGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL
Sbjct: 61  ASNNNMGIGNSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLL 120

Query: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNS------SEADMVSGIDE 180
           GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNS      SEADMVSGIDE
Sbjct: 121 GVDKGSKTVEWLLTQASPEILKLAKQRNCSHIITTTVCSNSNSNSNSNSSEADMVSGIDE 180

Query: 181 VGGGGGGPKKMNSCSLKRKRDKQPRRTMCKELRQKARERARARTMEKKNQIFKDCSDHHH 240
           VGGGG  PKK+NSCSLKRKRDKQPR+TMCKELRQKARERARARTMEKKNQIFKDCSDHHH
Sbjct: 181 VGGGG--PKKINSCSLKRKRDKQPRKTMCKELRQKARERARARTMEKKNQIFKDCSDHHH 240

Query: 241 --PNHNKISSCSWSSPFETCGEESGGTHSYNFNPSMEVENLCSFEIMTKWSPSISSLNFL 300
             PNHNKISSCSWSSPFET GEESG THSYNFNP+ME ENLCSFEIMTKWSPSISSLNFL
Sbjct: 241 HHPNHNKISSCSWSSPFETGGEESGATHSYNFNPAMEDENLCSFEIMTKWSPSISSLNFL 300

Query: 301 QPQHEFEDTDIFG 305
           QP HEFEDT+IFG
Sbjct: 301 QP-HEFEDTNIFG 308

[Close]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL
Match: A0A0A0LVQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 6.53e-80
Identity = 196/365 (53.70%), Postives = 229/365 (62.74%), Query Frame = 0


Query: 1   MFFST------KNDDDD------DHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQ 60
           MFFST      KN  D       D DHSFHLPISFFPFPSPFEVD   DD+  NFTTNS 
Sbjct: 1   MFFSTNSSGNTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60

Query: 61  KNFTIP---SPDNIVAS-------NKKMGIGNSDQKKLKI-----PRKRLSKKDRHSKIT 120
            N +     +P  I+++       N  M + NSDQK  K+      RKRLSKKDRHSKIT
Sbjct: 61  SNSSQNYNNNPPPIISTCNSPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKIT 120

Query: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLA---KQRNCS 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA   K  NC 
Sbjct: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC- 180

Query: 181 HIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP----------RR 240
             I+ +  + SNSSE D   G+  + G      K N+  + +K+ K+           R+
Sbjct: 181 FTISNSSSNYSNSSELDNEVGV--IIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRK 240

Query: 241 TMCKELRQKARERARARTMEK-KNQIF-KD---CSDHHHPNHNKI-SSCSWSSPFETCG- 300
           TM KELR+KARERARART+EK K+Q+F +D   CSD H PN   I SS SWSSPFET G 
Sbjct: 241 TMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGG 300

Query: 301 EESGGT---HSYNFN--------PSMEVENLCSFE-IMTKWSPSI-SSLNFLQPQHEFED 305
           EES GT    SYN N         S   +   SF+ I+ KWSPS  S+ NFL  QHEFED
Sbjct: 301 EESAGTTTHQSYNNNNNPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFED 359

[Close]

BLAST of Csor.00g066330 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-22
Identity = 95/258 (36.82%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 10  DDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIVASNKKMGIG 69
           +D+H  S H P++      P E  E       N   +SQ+                  I 
Sbjct: 97  NDNHHPSLHFPLNNTIVEQPTEPSETI-----NLIEDSQR------------------IS 156

Query: 70  NSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTV 129
            S   K+K   K+ S+ DRHSKI TA+G RDRRMRLSL VA++ FGLQD+LG DK SKTV
Sbjct: 157 TSQDPKMK-KAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTV 216

Query: 130 EWLLTQASPEILKLA---KQRNC------SHI--ITTTVCSNSNSSEADMVSGIDEVGGG 189
           EWLLTQA PEI+K+A       C      SHI  +  ++ ++S+  E   +  +D+ G  
Sbjct: 217 EWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDRGSN 276

Query: 190 GGGPK----KMNSCSLKRKRDKQPRRT-----MCKELRQKARERARARTMEK-------K 241
               +    K++  S++ KR +   RT     + KE R KARERA+ RTMEK       +
Sbjct: 277 TNTTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGR 329

[Close]

BLAST of Csor.00g066330 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-22
Identity = 95/256 (37.11%), Postives = 132/256 (51.56%), Query Frame = 0


Query: 10  DDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQKNFTIPSPDNIVASNKKMGIG 69
           +D+H  S H P++      P E  E       N   +SQ+                  I 
Sbjct: 97  NDNHHPSLHFPLNNTIVEQPTEPSETI-----NLIEDSQR------------------IS 156

Query: 70  NSDQKKLKIPRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTV 129
            S   K+K   K+ S+ DRHSKI TA+G RDRRMRLSL VA++ FGLQD+LG DK SKTV
Sbjct: 157 TSQDPKMK-KAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTV 216

Query: 130 EWLLTQASPEILKLA---KQRNC------SHIITTTVCSNSNSSEADMVSGIDEVGGGGG 189
           EWLLTQA PEI+K+A       C      SHI   ++ ++S+  E   +  +D+ G    
Sbjct: 217 EWLLTQAKPEIIKIATTLSHHGCFSSGDESHI--RSMDTSSDLCELASMWTVDDRGSNTN 276

Query: 190 GPK----KMNSCSLKRKRDKQPRRT-----MCKELRQKARERARARTMEK-------KNQ 241
             +    K++  S++ KR +   RT     + KE R KARERA+ RTMEK       ++Q
Sbjct: 277 TTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGRSQ 325

[Close]

BLAST of Csor.00g066330 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-17
Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 80  RKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPE 139
           R+ + K+DRHSKI TA+G RDRRMRLSL +AR+FF LQD+LG DK SKT+EWL +++   
Sbjct: 107 RRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTS 166

Query: 140 ILKLAKQRNCSHIITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQPR 199
           I +L K+R           + S     D    +DE         K    +LK +  K+  
Sbjct: 167 IKQL-KER----------VAASEGGGKDEHLQVDE---------KEKDETLKLRVSKRRT 226

Query: 200 RTM-----CKELRQKARERARARTMEK-KNQIFK 228
           +TM      KE R++AR+RAR RTM K K ++F+
Sbjct: 227 KTMESSFKTKESRERARKRARERTMAKMKMRLFE 240

[Close]

BLAST of Csor.00g066330 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 81  KRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEI 140
           K++ KKDRHSKI TA+G+RDRR+RLS+ +ARQFF LQD+LG DK SKT++WLL ++   I
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 141 LKLAKQRNCSH-----------IITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCS 200
            ++ + +N ++           +         ++ +   V G+      G G +++   +
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSP----GYGEEEVVCEA 202

Query: 201 LK---RKRDKQPRRTMCKELRQKARERARARTME 221
            K   RK+  + R    K L  KAR +A+ RT E
Sbjct: 203 TKAGIRKKKSELRNISSKGLGAKARGKAKERTKE 232

[Close]

BLAST of Csor.00g066330 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 81  KRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEI 140
           K++ KKDRHSKI TA+G+RDRR+RLS+ +ARQFF LQD+LG DK SKT++WLL ++   I
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 141 LKLAKQRNCSH-----------IITTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCS 200
            ++ + +N ++           +         ++ +   V G+      G G +++   +
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSP----GYGEEEVVCEA 202

Query: 201 LK---RKRDKQPRRTMCKELRQKARERARARTME 221
            K   RK+  + R    K L  KAR +A+ RT E
Sbjct: 203 TKAGIRKKKSELRNISSKGLGAKARGKAKERTKE 232

The following BLAST results are available for this feature:

BLAST of Csor.00g066330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1YKT1	2.4e-21	36.82	Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1	[more]
Q93WI2	9.3e-18	43.87	Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2	[more]
Q8LN68	6.0e-17	42.86	Transcription factor TB1 OS=Oryza sativa subsp. japonica OX=39947 GN=TB1 PE=1 SV...	[more]
Q9SBV6	5.1e-16	41.26	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	5.1e-16	41.26	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]

BLAST of Csor.00g066330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584372.1	4.05e-219	100.00	Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022923891.1	5.70e-215	98.37	transcription factor TCP18-like isoform X1 [Cucurbita moschata]	[more]
XP_023520103.1	1.57e-212	97.39	transcription factor TCP18-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022923892.1	2.15e-212	98.05	transcription factor TCP18-like isoform X2 [Cucurbita moschata]	[more]
XP_023520104.1	5.89e-210	97.07	transcription factor TCP18-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g066330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7Y5	2.76e-215	98.37	transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1E7D2	1.04e-212	98.05	transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KJS3	1.66e-196	91.37	transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1KF56	6.23e-194	91.05	transcription factor TCP18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0LVQ1	6.53e-80	53.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1	[more]

BLAST of Csor.00g066330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18550.1	1.7e-22	36.82	TCP family transcription factor	[more]
AT3G18550.2	2.2e-22	37.11	TCP family transcription factor	[more]
AT1G68800.1	6.2e-17	42.21	TCP domain protein 12	[more]
AT1G67260.1	1.3e-14	36.36	TCP family transcription factor	[more]
AT1G67260.2	1.3e-14	36.36	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 84..223 e-value: 2.2E-38 score: 132.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 85..143 score: 31.314051
None	No IPR available	PANTHER	PTHR31072:SF156	TRANSCRIPTION FACTOR TCP18	coord: 7..274
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 7..274
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 204..221 score: 10.045299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g066330.m01	Csor.00g066330.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity