Csor.00g066240 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g066240
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 10510837 .. 10511148 (+)
RNA-Seq ExpressionCsor.00g066240
SyntenyCsor.00g066240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGAGAAGAGGAAGAAAATGTCGCCGGGAGAGAAAGAGACGAAGAGGAGCAAGAAGACGAGGAAGGAAGAGAGAGAGGCGGCGGCGGCGGCGGGTGTGGAGACGGAGATGGAGGAGCCGACGACGGAGGAGGTGGAGGAATTCTATGCCATTTTGAGGAGGATGGATGTGGCTTTACGGTACTTGAAAGGGAAGAGGGTAGTGGAAAGGAGAACGACGGCGGAGACGGCGGTGGTTGGCACCGGAAAGGGCCAGGAAATTCAGGAACTGAATTTGAATGAAGTGCCTGCTGATTCTACTAATTAA

mRNA sequence

ATGGAGAGAGAGAAGAGGAAGAAAATGTCGCCGGGAGAGAAAGAGACGAAGAGGAGCAAGAAGACGAGGAAGGAAGAGAGAGAGGCGGCGGCGGCGGCGGGTGTGGAGACGGAGATGGAGGAGCCGACGACGGAGGAGGTGGAGGAATTCTATGCCATTTTGAGGAGGATGGATGTGGCTTTACGGTACTTGAAAGGGAAGAGGGTAGTGGAAAGGAGAACGACGGCGGAGACGGCGGTGGTTGGCACCGGAAAGGGCCAGGAAATTCAGGAACTGAATTTGAATGAAGTGCCTGCTGATTCTACTAATTAA

Coding sequence (CDS)

ATGGAGAGAGAGAAGAGGAAGAAAATGTCGCCGGGAGAGAAAGAGACGAAGAGGAGCAAGAAGACGAGGAAGGAAGAGAGAGAGGCGGCGGCGGCGGCGGGTGTGGAGACGGAGATGGAGGAGCCGACGACGGAGGAGGTGGAGGAATTCTATGCCATTTTGAGGAGGATGGATGTGGCTTTACGGTACTTGAAAGGGAAGAGGGTAGTGGAAAGGAGAACGACGGCGGAGACGGCGGTGGTTGGCACCGGAAAGGGCCAGGAAATTCAGGAACTGAATTTGAATGAAGTGCCTGCTGATTCTACTAATTAA

Protein sequence

MEREKRKKMSPGEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVALRYLKGKRVVERRTTAETAVVGTGKGQEIQELNLNEVPADSTN
Homology
BLAST of Csor.00g066240 vs. NCBI nr
Match: KAG6584363.1 (hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183 bits (465), Expect = 6.50e-58
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MEREKRKKMSPGEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVA 60
           MEREKRKKMSPGEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVA
Sbjct: 1   MEREKRKKMSPGEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVA 60

Query: 61  LRYLKGKRVVERRTTAETAVVGTGKGQEIQELNLNEVPADSTN 103
           LRYLKGKRVVERRTTAETAVVGTGKGQEIQELNLNEVPADSTN
Sbjct: 61  LRYLKGKRVVERRTTAETAVVGTGKGQEIQELNLNEVPADSTN 103

BLAST of Csor.00g066240 vs. NCBI nr
Match: KGN64116.1 (hypothetical protein Csa_013670 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 3.09e-24
Identity = 73/113 (64.60%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MEREKRKKMSPGEK-----ETKRSKKTR----KEEREAAAAAGVETEMEEPTTEEVEEFY 60
           MEREKRK+MS GEK     E KR KK +    +E++EA AAA    E+EEP+TEEVEEFY
Sbjct: 1   MEREKRKEMSEGEKGGVVEEMKRRKKKKIKKEEEKKEAVAAA----EVEEPSTEEVEEFY 60

Query: 61  AILRRMDVALRYLKGKRVVERRTT-AETAVVGTGKGQEIQELNLNEVPADSTN 103
           AILRRMD ALRYLKGKRV ERRTT  ETAV    K     ELNLNEVP+DS+N
Sbjct: 61  AILRRMDEALRYLKGKRVPERRTTMGETAVAVENK-----ELNLNEVPSDSSN 104

BLAST of Csor.00g066240 vs. NCBI nr
Match: PIN06524.1 (hypothetical protein CDL12_20925 [Handroanthus impetiginosus])

HSP 1 Score: 47.0 bits (110), Expect = 4.67e-04
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 41  EPTTEEVEEFYAILRRMDVALRYL-KGKRVVERR-TTAETAVVGTGKGQEIQELNLNEVP 100
           +PT EEVEEF+AILRRM VA++Y  KG    +R  +T  TA  G G   +   L+LN +P
Sbjct: 35  QPTEEEVEEFFAILRRMRVAVKYFEKGASSSDRGGSTLHTAATGGGNRLKNGGLDLNAIP 94

BLAST of Csor.00g066240 vs. NCBI nr
Match: XP_019446269.1 (PREDICTED: uncharacterized protein LOC109349769 isoform X1 [Lupinus angustifolius])

HSP 1 Score: 47.4 bits (111), Expect = 5.60e-04
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 12 GEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVALRYLKGK 67
          GE E+ R KK + E+  AAAA G +     PT EEVEEFYAILRRM VA++Y   K
Sbjct: 15 GEAESDRLKKLKAEKDAAAAAGGSDDTTVVPTEEEVEEFYAILRRMRVAVKYFNEK 70

BLAST of Csor.00g066240 vs. NCBI nr
Match: XP_019446270.1 (PREDICTED: uncharacterized protein LOC109349769 isoform X2 [Lupinus angustifolius])

HSP 1 Score: 47.4 bits (111), Expect = 5.60e-04
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 12 GEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVALRYLKGK 67
          GE E+ R KK + E+  AAAA G +     PT EEVEEFYAILRRM VA++Y   K
Sbjct: 15 GEAESDRLKKLKAEKDAAAAAGGSDDTTVVPTEEEVEEFYAILRRMRVAVKYFNEK 70

BLAST of Csor.00g066240 vs. ExPASy TrEMBL
Match: A0A0A0LVR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042280 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.50e-24
Identity = 73/113 (64.60%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MEREKRKKMSPGEK-----ETKRSKKTR----KEEREAAAAAGVETEMEEPTTEEVEEFY 60
           MEREKRK+MS GEK     E KR KK +    +E++EA AAA    E+EEP+TEEVEEFY
Sbjct: 1   MEREKRKEMSEGEKGGVVEEMKRRKKKKIKKEEEKKEAVAAA----EVEEPSTEEVEEFY 60

Query: 61  AILRRMDVALRYLKGKRVVERRTT-AETAVVGTGKGQEIQELNLNEVPADSTN 103
           AILRRMD ALRYLKGKRV ERRTT  ETAV    K     ELNLNEVP+DS+N
Sbjct: 61  AILRRMDEALRYLKGKRVPERRTTMGETAVAVENK-----ELNLNEVPSDSSN 104

BLAST of Csor.00g066240 vs. ExPASy TrEMBL
Match: A0A2G9GMJ7 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20925 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.26e-04
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 41  EPTTEEVEEFYAILRRMDVALRYL-KGKRVVERR-TTAETAVVGTGKGQEIQELNLNEVP 100
           +PT EEVEEF+AILRRM VA++Y  KG    +R  +T  TA  G G   +   L+LN +P
Sbjct: 35  QPTEEEVEEFFAILRRMRVAVKYFEKGASSSDRGGSTLHTAATGGGNRLKNGGLDLNAIP 94

BLAST of Csor.00g066240 vs. ExPASy TrEMBL
Match: A0A4P1RG17 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_32790 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.19e-04
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 12 GEKETKRSKKTRKEEREAAAAAGVETEMEEPTTEEVEEFYAILRRMDVALRYLKGK 67
          GE E+ R KK + E+  AAAA G +     PT EEVEEFYAILRRM VA++Y   K
Sbjct: 15 GEAESDRLKKLKAEKDAAAAAGGSDDTTVVPTEEEVEEFYAILRRMRVAVKYFNEK 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6584363.16.50e-58100.00hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN64116.13.09e-2464.60hypothetical protein Csa_013670 [Cucumis sativus][more]
PIN06524.14.67e-0447.62hypothetical protein CDL12_20925 [Handroanthus impetiginosus][more]
XP_019446269.15.60e-0455.36PREDICTED: uncharacterized protein LOC109349769 isoform X1 [Lupinus angustifoliu... [more]
XP_019446270.15.60e-0455.36PREDICTED: uncharacterized protein LOC109349769 isoform X2 [Lupinus angustifoliu... [more]
Match NameE-valueIdentityDescription
A0A0A0LVR01.50e-2464.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042280 PE=4 SV=1[more]
A0A2G9GMJ72.26e-0447.62Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20925 P... [more]
A0A4P1RG173.19e-0455.36Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_32790 PE=4 S... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availablePANTHERPTHR35735:SF5TRANSMEMBRANE PROTEIN DDB_G0274347-LIKEcoord: 1..95
IPR034577Protein NIM1-INTERACTING 2PANTHERPTHR35735PROTEIN NIM1-INTERACTING 2coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g066240.m01Csor.00g066240.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010112 regulation of systemic acquired resistance