Csor.00g066180 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g066180
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	40S ribosomal protein S7
Location	Csor_Chr13: 10470949 .. 10475273 (-)
RNA-Seq Expression	Csor.00g066180
Synteny	Csor.00g066180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCTGCAGTGAAATTGAAGATGAGAATAATAACAATAACAATGAGGAGGAGGAGCTCCGGAGGGGCCCTTGGACTGTCGAAGAAGACAACCTCCTCATCACTTCCATTTCTATTCACAGCGAAGGCCGCTGGAATCTCCTCGCCAAACGCTCCGGTAACTACCTATTTTGCCTTCTATTTCTTTTATTTATAGCTCAAATCTTGACGCTTATGTAACCATTTTCAGGGCTAAGAAGGACAGGGAAGAGTTGCCGACTCAGGTGGCTCAATTATCTCAAGCCAGATGTCAAGAGGGGAAATTTGTCGCCCCAAGAACAGCTCTTGATTCTTGATCTTCATTCTAAATGGGGCAACAGGTAAATTCTTCTTCATCTTTGTTAGATAATGGAAGTACTAAATGGAGAGCTTATTCTCGAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACGATCTTCATTCCAAATTTGCATAAATTTGTGATTGATTTTATTTAAGGTGGTCGAAGATTGCACAGCATTTGCCCGGAAGAACTGACAATGAAATTAAAAATTATTGGAGAACCAGAGTTCAAAAGCAAGCTAGACATCTTAATATGGATACCAACAGTGACGCATTTCAGCAGATTATTCGCTACTATTGGATCCCAAGATTAATTCAAAAAATCAACCAATCGTCGTCGTTGCCACCGCCGCCGCTGCCGCCGCCGCCGCCACCGTCGGAGTTGCCGGGTACTTCTCAAGCAGAGATGGTCTCCCAGAGTTCGTATGGTTTTGAAGCTCCGGTGACGGCGACGCCTCTGCAAATCGGTGGAGATTTGATGGGGAGTTCGTGTAATTCTTCCTCTTCTTCTTCTTCTGGTTTTCAAAATTACGAGAATTACGGGTCGTTTGTGAATGATTATTGGGACGAGGAGCATGGCAGGGGAGAGATGATGAACTGGGCAACGACGGCGGTGACGGGGGATTCTGGTTACCCGGTTGCCCACTGCCACATGGCTGAAACTAGTTGGACACACAGCGATTTTACCGGTTACGTGCCCAGTATGGATGAATTATGGCAATTTTAGGAAGAAAAGAAAAAGGGTTTCTTTTTCCTTTTCTCTAAGATAACCCATATAAAAAAATTCTTCATAGATTCATAATTTTAATCCAAAGTAGAACCCCCCAATTGTAGAATATTGTAATTTTAATATAGTTGTATTAAAATAATGTTTGATTATTCTAATATTTTTGTTACAATATGGTGTGTGATTGTAACAAGATTATGTTAATATCTTACTAACCTATGATTAATATATGATAATAATGAGGGGAATCAAAATTAACATAAATCAAATTTGTGTAAATTTTGATTTATAGAAATCATTTTAAAATATTTTATTTACACCAACCTTTAATTTGAATAAAATTATCAGCAAAATTGATTGATTCGAAGCCTTATTTTATATATTTAACACGTGAGGCTAAAATTTTAAAAATATTATAGGTTGGCATAGTGGAGGACTTTAGGAGTGGTGGAATTAGAATCATACCTTTGAAAGGTAGCTTTCGACATTGAATTATTTTATTTTATTTTATTTTATTTTTATTTTATTTTATGGAAAGACCGATTGGATTTTCTCTCTCTTTGTTGATTTTTCAGACCATCTAGATAGATCCCCTCTAGGGTGTAGCTGCCACCCTATTACCTTTATTACCTTAAAATATTCTATTTTAGCTCGTATATTTTTAATTGTCTAAATTTAATTTATATATTTTAAATATAATATTTTGGAAATAAATAATAATAATAGTTTTCATGTAGATATTTTAAAAATATTTATTTAAAAAATGCTAAAATTTGTTAATTATTTTCGGCCTATTTGTCTATTTGGACATGCACGACGACAAAGTTGGGCCTGCGAAATGAGCTCACAAGCCCAATGGAAAAAGCCCAAATTTCATGCAGCCCCATTTTGGGCTTTTTCCATTGGGCTTGTTTTTGGGTAAATGATAGCCCAAGAGTTGTGTGTTTTGGGCCTGACCTACTACAAACATTTGATCTCATCCGTCCAATGAATAAAAAATAATCTCAGCCTTTGCTTTCATTGTTTTATAAGCTGCCCTTCTTCTCCAAGCCCTAGTCTTCATCGGCTGAACGTTTTCATTCACTGAGTAGCCGATCGCAGCCTTCTAGCGCCGTTGAGTATGGTTCTCTAACTGCAACATTTCGCCATTTTCCCCTCTCTTTGCTAGTAGTCTTCTCTTTGCTAGTTGTCTTCAATGCTCTGTTTTCGTTTCATTCTTTAGGAATTTTTTGACTTTTGCACACTTCATTTTCCGAATCCTCCGAGGTTCGTGATTGCTTAGTGTAGTTGCCCTGTGGATGACGGAGATGGTTAATATATTACCGGTTAACTTCAGCATTGTTATTCATTTTTGTTTTTCTGATTGGATTCGTTAATTTAAGACTGTAAGTGGTTGGAGGCTTAGATTAAGAAATTCTTCATATTTTTGTGTTTCGAATTTAAAGCCTAGAAAATGATAGGTGTCTTCGACTTCCGTAGTCAAATCCTTTAATTTGAATTTCCATTTTCACAATATTCAGTTGCCTCTTAAAATGAATGTTTGGCGCTCTCTGAGGGTTTTCCCCTTGTCTTGTCGTCTTGTTCAGCTAGATTTGTTAAGATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGTTTGCTTCATAGAGAACAGAAATCTCTTTGTTTTTTTTACTCAATTGTTAACGTTCCTTTACATTCCTCTTTATTGGCACTTCCGATGTCTCTGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTGTAAGTGACTTAGAGTTATTTCTAAAACATGTTAATCATGATATAATCATTCTGTTTTTCATTATACTAATATTTACGTCTTTGTGGTTGCAGTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGTACTAGAAGGTCCATTTTTGCATTAGTTCTCTTTTCACTTCGCAAAAGCATAATCATTTTTAAAGTTTTTATCATTAGTTAACTTGGGACATGAATGTGGTGACATACTTCCTACATTGACTTCAAGTGATGGTACGGTGTGAGGAGGTTCATGTCCTACACATTGTTCAATTCATGATATAATACAAAGATTGTATCAGTCAGTTTAGACATCAATAATTAGAAAGATGTTCCACCTTTTTTCCCCCTATGTTCTCTACTTTAAGGATTGATCGACGTGTATACAAATGTATGTCATGTGTAAGCCTTATGTTTTCTTGTGCTAATTTTCTTTGTGACCCCTTGTTAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTAAATGCATGGCTTAGAATACCTTTTCCTCATTTCATCTGTCCAGTTAGTATGGAATTTAGATTGTGAATGTCATCTATATTTGGTAAGTTGTATGCTTTTTCATTGATTTTCTTAAGTAATTGCCGCAGCTTCTATGCACCACAACTGAATTCTCATCGATCATTTTATTTACTCTATTGCTCCAGAATATACGATCCTATTTTTTGCATCTACTGTTTAGAGGGTATAATGGATTCACTTGGCTTGTGAGACTAGGACTGATGCTAATGAATAAAAATCCAAAATTATATTTGTTTGGAATTTCATAGAAGGCCAACCTTCCATTCTCAACTAAACCATTACTTATCCTGGTTTTGGTTTCTTCGCCACCAAATGTTCTTGCGATGCTTGGGATCTCAGAATGTATAATTAGATAGGGGCTAGTTTGTGGTGGTGTGCATTTTATTTACACTCTTACACGCTCGGTCTATATATCATAGCACCTATTACGGGTATTTACTCTTTGGTTCTTCTGGGTGCAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAA

mRNA sequence

ATGAGCAGCTGCAGTGAAATTGAAGATGAGAATAATAACAATAACAATGAGGAGGAGGAGCTCCGGAGGGGCCCTTGGACTGTCGAAGAAGACAACCTCCTCATCACTTCCATTTCTATTCACAGCGAAGGCCGCTGGAATCTCCTCGCCAAACGCTCCGGGCTAAGAAGGACAGGGAAGAGTTGCCGACTCAGGTGGCTCAATTATCTCAAGCCAGATGTCAAGAGGGGAAATTTGTCGCCCCAAGAACAGCTCTTGATTCTTGATCTTCATTCTAAATGGGGCAACAGGTGGTCGAAGATTGCACAGCATTTGCCCGGAAGAACTGACAATGAAATTAAAAATTATTGGAGAACCAGAGTTCAAAAGCAAGCTAGACATCTTAATATGGATACCAACAGTGACGCATTTCAGCAGATTATTCGCTACTATTGGATCCCAAGATTAATTCAAAAAATCAACCAATCGTCGTCGTTGCCACCGCCGCCGCTGCCGCCGCCGCCGCCACCGTCGGAGTTGCCGGGTACTTCTCAAGCAGAGATGGTCTCCCAGAGTTCGTATGGTTTTGAAGCTCCGGTGACGGCGACGCCTCTGCAAATCGGTGGAGATTTGATGGGGAGTTCGTGTAATTCTTCCTCTTCTTCTTCTTCTGGTTTTCAAAATTACGAGAATTACGGGTCGTTTGTGAATGATTATTGGGACGAGGAGCATGGCAGGGGAGAGATGATGAACTGGGCAACGACGGCGGTGACGGGGGATTCTGGTTACCCGGTTGCCCACTGCCACATGGCTGAAACTAGTTGGACACACAGCGATTTTACCGGTTACGTGCCCACCGATCGCAGCCTTCTAGCGCCGTTGACTAGATTTGTTAAGATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAA

Coding sequence (CDS)

ATGAGCAGCTGCAGTGAAATTGAAGATGAGAATAATAACAATAACAATGAGGAGGAGGAGCTCCGGAGGGGCCCTTGGACTGTCGAAGAAGACAACCTCCTCATCACTTCCATTTCTATTCACAGCGAAGGCCGCTGGAATCTCCTCGCCAAACGCTCCGGGCTAAGAAGGACAGGGAAGAGTTGCCGACTCAGGTGGCTCAATTATCTCAAGCCAGATGTCAAGAGGGGAAATTTGTCGCCCCAAGAACAGCTCTTGATTCTTGATCTTCATTCTAAATGGGGCAACAGGTGGTCGAAGATTGCACAGCATTTGCCCGGAAGAACTGACAATGAAATTAAAAATTATTGGAGAACCAGAGTTCAAAAGCAAGCTAGACATCTTAATATGGATACCAACAGTGACGCATTTCAGCAGATTATTCGCTACTATTGGATCCCAAGATTAATTCAAAAAATCAACCAATCGTCGTCGTTGCCACCGCCGCCGCTGCCGCCGCCGCCGCCACCGTCGGAGTTGCCGGGTACTTCTCAAGCAGAGATGGTCTCCCAGAGTTCGTATGGTTTTGAAGCTCCGGTGACGGCGACGCCTCTGCAAATCGGTGGAGATTTGATGGGGAGTTCGTGTAATTCTTCCTCTTCTTCTTCTTCTGGTTTTCAAAATTACGAGAATTACGGGTCGTTTGTGAATGATTATTGGGACGAGGAGCATGGCAGGGGAGAGATGATGAACTGGGCAACGACGGCGGTGACGGGGGATTCTGGTTACCCGGTTGCCCACTGCCACATGGCTGAAACTAGTTGGACACACAGCGATTTTACCGGTTACGTGCCCACCGATCGCAGCCTTCTAGCGCCGTTGACTAGATTTGTTAAGATGTTTACGGCCCTGAAAAAGATCCACAAGGATAAGGATGTCGAACCTTCCGAGTTCGAAGAGACTGTTGCGCAGGCGCTCTTTGATTTGGAAAACACCAATTCGGAGCTGAAAAGTGACCTTAAGGATCTTTACATTAATTCCGCTCTTCAAGTTGATGTTGCTGGAAACAAGAAGGCCGTTGTTATCTATGTTCCCTTTAGATTGAGGAAGGCATTCCGCAAGATTCAGTTGAGGCTTGTCCGTGAGCTTGAGAAGAAGTTCAGTGGAAAGGATGTGATTCTGGTTGCTAACCGAAGAATCCTGAGACCTCCAAAGAAAGGGTCAGCAGCTCAAAGGCCTCGCACACGAACTCTTACTTCTGTGCATGAAGCAATGCTAGAAGATATCGTTTTGCCTGCAGAAATTGTTGGGAAACGAACCAGATACAGGGTTGATGGATCAAAAATCATGAAGGTTTTCTTGGACCCGAAAGAGCAGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTACAGGAAGCTTTCTGGCAAAGACGTTGCCTTTGAGTTCCCGATTACTGAGGCATAA

Protein sequence

MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAEMVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRGEMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPTDRSLLAPLTRFVKMFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFPITEA

Homology

[Close]

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot
Match: Q9ZNS1 (40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.5e-83
Identity = 155/190 (81.58%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           M+TAL+KIHKDKD EP+EFEE VAQALFD ENTN E+KSDLKDLYINSALQ+DV+G KKA
Sbjct: 1   MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVI+VP+RLRK+FRKI  RLVRELEKKFSGK+V+L+A RRILRPPKKGSA QRPR+RTLT
Sbjct: 61  VVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           +VH+AMLEDIV PAEIVGKR RYR+DGSKIMKVFLDPK +N+TE KLE+FA VYRKLSGK
Sbjct: 121 AVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGK 180

Query: 473 DVAFEFPITE 483
           DV FEFP+TE
Sbjct: 181 DVVFEFPLTE 190

[Close]

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot
Match: Q9C514 (40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.2e-81
Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           MF+A  KIHK+K VE SE +E VAQA FDLENTN ELKS+LKDLY+NSA+QVD++G +KA
Sbjct: 1   MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           +V+ VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A RRI+RPPKKGSAA+RPR RTLT
Sbjct: 61  IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEA+L+D+VLPAEIVGKRTRYR+DG+KIMKVFLDPKE+NNTEYK+E+F+AVY+KL+GK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FEFPITEA
Sbjct: 181 DVVFEFPITEA 191

[Close]

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot
Match: Q9XH45 (40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.2e-81
Identity = 150/190 (78.95%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           MF+A  KIHKDK V P+EFEE VAQA FDLENTN ELKSDLKDLYIN A+ +D+AGN+KA
Sbjct: 1   MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVIYVPFRLRKAFRKI  RLVRELEKKFSG DVI VA RRI+RPPKKGSA QRPR RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEAMLED+  PAEIVGKRTRYRVDG+KIMKV+L+PKE+NNTEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 180

Query: 473 DVAFEFPITE 483
           DV FE+P+ +
Sbjct: 181 DVVFEYPVAD 190

[Close]

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot
Match: Q9M885 (40S ribosomal protein S7-2 OS=Arabidopsis thaliana OX=3702 GN=RPS7B PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.0e-79
Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           M++   KIHKDK V P+EFEE V QALFDLENTN ELKS+LKDLYIN A+Q+D++GN+KA
Sbjct: 1   MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVIYVPFRLRKAFRKI LRLVRELEKKFSGKDVI VA RRI+RPPKKGSA QRPR RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEAMLED+  PAEIVGKRTRYR+DG+KIMKVFLD K +N+TEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FE+P+ EA
Sbjct: 181 DVVFEYPVIEA 191

[Close]

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot
Match: Q9XET4 (40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-78
Identity = 143/190 (75.26%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           M+TA KKI KDK +EPSEFE+TVAQA FDLEN N ELKSD+KDLYIN+A Q+DVAGN+KA
Sbjct: 1   MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVI+VP+RLRK FRKI +RLVRELEKKFSGKDV++VA RRI+RPPKKGSA  RPRTRTLT
Sbjct: 61  VVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           +VH+ +LED+V PAEIVGKR RYR+DGSKI+K+FLDP E+NNTEYKL++F AVYR+L GK
Sbjct: 121 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGK 180

Query: 473 DVAFEFPITE 483
           DV +E+P+ E
Sbjct: 181 DVVYEYPVAE 190

[Close]

BLAST of Csor.00g066180 vs. NCBI nr
Match: KAG6584357.1 (40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE
Sbjct: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG
Sbjct: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPTDRSLLAPLTRFVKMFTALKKI 300
           EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPTDRSLLAPLTRFVKMFTALKKI
Sbjct: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPTDRSLLAPLTRFVKMFTALKKI 300

Query: 301 HKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFR 360
           HKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFR
Sbjct: 301 HKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFR 360

Query: 361 LRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLE 420
           LRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLE
Sbjct: 361 LRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLE 420

Query: 421 DIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFPI 480
           DIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFPI
Sbjct: 421 DIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFPI 480

Query: 481 TEA 483
           TEA
Sbjct: 481 TEA 483

[Close]

BLAST of Csor.00g066180 vs. NCBI nr
Match: XP_023520149.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547 bits (1410), Expect = 1.08e-192
Identity = 268/279 (96.06%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQARHLNMDT+SDAFQQIIRYYW+PRLIQKINQSS LPP   PPPPPPSELPGTSQAE
Sbjct: 121 VQKQARHLNMDTDSDAFQQIIRYYWMPRLIQKINQSSPLPP--QPPPPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEAP TATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG+G
Sbjct: 181 MVSQSSYGFEAPATATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGKG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPT 279
           EMMNWATTAVTGDSGYPVAHCHMAET+WTH+DFTGYVP+
Sbjct: 241 EMMNWATTAVTGDSGYPVAHCHMAETNWTHTDFTGYVPS 277

[Close]

BLAST of Csor.00g066180 vs. NCBI nr
Match: XP_022924084.1 (transcription factor MYB62-like [Cucurbita moschata])

HSP 1 Score: 543 bits (1400), Expect = 3.58e-191
Identity = 268/279 (96.06%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLI SISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLIASISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQARHLN+DT+SDAFQQIIRYYWIPRLIQKINQSSSLPPPP  P PPPSELPGTSQAE
Sbjct: 121 VQKQARHLNIDTDSDAFQQIIRYYWIPRLIQKINQSSSLPPPP--PLPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG
Sbjct: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPT 279
           EM NWATTAVTGDSGYPVAHCH AET+WTHSDFTGY P+
Sbjct: 241 EMTNWATTAVTGDSGYPVAHCHTAETNWTHSDFTGYAPS 277

[Close]

BLAST of Csor.00g066180 vs. NCBI nr
Match: XP_023000999.1 (transcription factor MYB62-like [Cucurbita maxima])

HSP 1 Score: 526 bits (1355), Expect = 2.23e-184
Identity = 258/279 (92.47%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDEN   NNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENKKKNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLS QEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSSQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQAR+LNMDT+SDAFQQ+IRYYWIPRLIQKINQSS     PLPPPPPPSELPGTSQAE
Sbjct: 121 VQKQARYLNMDTDSDAFQQLIRYYWIPRLIQKINQSS-----PLPPPPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEA VTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG+G
Sbjct: 181 MVSQSSYGFEAAVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGKG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPT 279
           EMMNW TTAVTGD+GYPV+HCH+AET+WTH DFTGYVP+
Sbjct: 241 EMMNWTTTAVTGDAGYPVSHCHVAETNWTHGDFTGYVPS 274

[Close]

BLAST of Csor.00g066180 vs. NCBI nr
Match: KAB2609512.1 (transcription factor MYB108-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 532 bits (1371), Expect = 3.00e-183
Identity = 305/500 (61.00%), Postives = 356/500 (71.20%), Query Frame = 0


Query: 20  ELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 79
           ELRRGPWT+EED+LLI  I+ H EGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL
Sbjct: 19  ELRRGPWTLEEDSLLIQYIARHGEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 78

Query: 80  SPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLNMDTNSDAFQQ 139
           SP+EQLLILDLHSK GN+WSKIAQ+LPGRTDNEIKNYWRTRVQKQARHL +DT+S  FQ 
Sbjct: 79  SPEEQLLILDLHSKMGNKWSKIAQYLPGRTDNEIKNYWRTRVQKQARHLRIDTSSVEFQN 138

Query: 140 IIRYYWIPRLIQKINQSSSLPPPPLPPP--------------------PPPSELPGTSQA 199
           +IR +W+PRL QKI   +S+    L                       PPP  +    + 
Sbjct: 139 MIRCFWMPRLQQKIGGGTSISSAVLNQNHAISQPLEDNTFPHFTATIWPPPQNI--VQEE 198

Query: 200 EMVSQSSYGFEAPVTATPLQI-GGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG 259
             +S S Y  +     T  +   G  +  S     S +  F     +    N+ +D E  
Sbjct: 199 INMSASMYNLDVEKQNTKAEYCTGPYILPSEPMDMSKTVQFPECPPFHCGDNNGYDTE-- 258

Query: 260 RGEMMNWATTAVTGDS-----GYPVAHCHMAETSWTHS-----DFTGYVPTDRSLLAPLT 319
                N   T V+ DS     G     C++AET+W  S        G+  T +     L+
Sbjct: 259 ---SFNLQET-VSADSAPNFPGNSAGDCYVAETNWVFSIPAEARALGFSVTQKQKSLRLS 318

Query: 320 -----RFVKMFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQ 379
                 F KM+T+ KKI KD + EP+EFEE+VAQA+FDLENTN ELKSDLKDLYINSA+Q
Sbjct: 319 ILLESDFAKMYTSRKKISKDNNAEPTEFEESVAQAVFDLENTNQELKSDLKDLYINSAIQ 378

Query: 380 VDVAGNKKAVVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAA 439
           VDV+G+KKAVVI+VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A RRI+RPPKKGSAA
Sbjct: 379 VDVSGSKKAVVIHVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAA 438

Query: 440 QRPRTRTLTSVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFA 483
           QRPRTRTLT+VHEAMLED+VLPAEI GKR RYR+DGSKIMKVFLDPKE+NNTEYKLESF+
Sbjct: 439 QRPRTRTLTAVHEAMLEDVVLPAEITGKRIRYRLDGSKIMKVFLDPKERNNTEYKLESFS 498

[Close]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL
Match: A0A6J1E866 (transcription factor MYB62-like OS=Cucurbita moschata OX=3662 GN=LOC111431623 PE=4 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 1.73e-191
Identity = 268/279 (96.06%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLI SISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLIASISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQARHLN+DT+SDAFQQIIRYYWIPRLIQKINQSSSLPPPP  P PPPSELPGTSQAE
Sbjct: 121 VQKQARHLNIDTDSDAFQQIIRYYWIPRLIQKINQSSSLPPPP--PLPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG
Sbjct: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPT 279
           EM NWATTAVTGDSGYPVAHCH AET+WTHSDFTGY P+
Sbjct: 241 EMTNWATTAVTGDSGYPVAHCHTAETNWTHSDFTGYAPS 277

[Close]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL
Match: A0A6J1KLJ0 (transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111495267 PE=4 SV=1)

HSP 1 Score: 526 bits (1355), Expect = 1.08e-184
Identity = 258/279 (92.47%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MSSCSEIEDENNNNNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60
           MSSCSEIEDEN   NNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK
Sbjct: 1   MSSCSEIEDENKKKNNEEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGK 60

Query: 61  SCRLRWLNYLKPDVKRGNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120
           SCRLRWLNYLKPDVKRGNLS QEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
Sbjct: 61  SCRLRWLNYLKPDVKRGNLSSQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 120

Query: 121 VQKQARHLNMDTNSDAFQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAE 180
           VQKQAR+LNMDT+SDAFQQ+IRYYWIPRLIQKINQSS     PLPPPPPPSELPGTSQAE
Sbjct: 121 VQKQARYLNMDTDSDAFQQLIRYYWIPRLIQKINQSS-----PLPPPPPPSELPGTSQAE 180

Query: 181 MVSQSSYGFEAPVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGRG 240
           MVSQSSYGFEA VTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG+G
Sbjct: 181 MVSQSSYGFEAAVTATPLQIGGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHGKG 240

Query: 241 EMMNWATTAVTGDSGYPVAHCHMAETSWTHSDFTGYVPT 279
           EMMNW TTAVTGD+GYPV+HCH+AET+WTH DFTGYVP+
Sbjct: 241 EMMNWTTTAVTGDAGYPVSHCHVAETNWTHGDFTGYVPS 274

[Close]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL
Match: A0A5N5G7Y2 (Transcription factor MYB108-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_012680 PE=3 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 1.45e-183
Identity = 305/500 (61.00%), Postives = 356/500 (71.20%), Query Frame = 0


Query: 20  ELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 79
           ELRRGPWT+EED+LLI  I+ H EGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL
Sbjct: 19  ELRRGPWTLEEDSLLIQYIARHGEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 78

Query: 80  SPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLNMDTNSDAFQQ 139
           SP+EQLLILDLHSK GN+WSKIAQ+LPGRTDNEIKNYWRTRVQKQARHL +DT+S  FQ 
Sbjct: 79  SPEEQLLILDLHSKMGNKWSKIAQYLPGRTDNEIKNYWRTRVQKQARHLRIDTSSVEFQN 138

Query: 140 IIRYYWIPRLIQKINQSSSLPPPPLPPP--------------------PPPSELPGTSQA 199
           +IR +W+PRL QKI   +S+    L                       PPP  +    + 
Sbjct: 139 MIRCFWMPRLQQKIGGGTSISSAVLNQNHAISQPLEDNTFPHFTATIWPPPQNI--VQEE 198

Query: 200 EMVSQSSYGFEAPVTATPLQI-GGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG 259
             +S S Y  +     T  +   G  +  S     S +  F     +    N+ +D E  
Sbjct: 199 INMSASMYNLDVEKQNTKAEYCTGPYILPSEPMDMSKTVQFPECPPFHCGDNNGYDTE-- 258

Query: 260 RGEMMNWATTAVTGDS-----GYPVAHCHMAETSWTHS-----DFTGYVPTDRSLLAPLT 319
                N   T V+ DS     G     C++AET+W  S        G+  T +     L+
Sbjct: 259 ---SFNLQET-VSADSAPNFPGNSAGDCYVAETNWVFSIPAEARALGFSVTQKQKSLRLS 318

Query: 320 -----RFVKMFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQ 379
                 F KM+T+ KKI KD + EP+EFEE+VAQA+FDLENTN ELKSDLKDLYINSA+Q
Sbjct: 319 ILLESDFAKMYTSRKKISKDNNAEPTEFEESVAQAVFDLENTNQELKSDLKDLYINSAIQ 378

Query: 380 VDVAGNKKAVVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAA 439
           VDV+G+KKAVVI+VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A RRI+RPPKKGSAA
Sbjct: 379 VDVSGSKKAVVIHVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAA 438

Query: 440 QRPRTRTLTSVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFA 483
           QRPRTRTLT+VHEAMLED+VLPAEI GKR RYR+DGSKIMKVFLDPKE+NNTEYKLESF+
Sbjct: 439 QRPRTRTLTAVHEAMLEDVVLPAEITGKRIRYRLDGSKIMKVFLDPKERNNTEYKLESFS 498

[Close]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL
Match: A0A498I5D4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_023569 PE=3 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 6.95e-182
Identity = 308/512 (60.16%), Postives = 362/512 (70.70%), Query Frame = 0


Query: 20  ELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 79
           ELRRGPWT+EED+LLI  I+ H EGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL
Sbjct: 18  ELRRGPWTLEEDSLLIQYIARHGEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKRGNL 77

Query: 80  SPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLNMDTNSDAFQQ 139
           SP+EQLLILDLHSK GNRWSKIAQ+LPGRTDNEIKNYWRTRVQKQARHL +DT+S  FQ 
Sbjct: 78  SPEEQLLILDLHSKMGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARHLRIDTSSVEFQN 137

Query: 140 IIRYYWIPRLIQKI-----------NQSSSLPPP---------PLPPPPPPSELPGTSQA 199
           +IR YW+PRL QKI           NQ+ ++  P              PPP  L    + 
Sbjct: 138 MIRCYWMPRLQQKIGGEISTSSAVLNQNHTISQPLEQNTFPHFTATISPPPQIL--VQEE 197

Query: 200 EMVSQSSYGFEAPVTATPLQI-GGDLMGSSCNSSSSSSSGFQNYENYGSFVNDYWDEEHG 259
             +S + Y  +     T  +   G  +  S     S +  F     +    N+ +D E  
Sbjct: 198 INMSATMYNLDVEKQNTKAEYCTGPYIFPSEPMDMSKTVQFPECPPFHCGDNNGYDTE-- 257

Query: 260 RGEMMNWATTAVTGDS-----GYPVAHCHMAETSW--THSDFT---------------GY 319
                N   T V+ DS     G   + C++AET+W  T+   T               G+
Sbjct: 258 ---SFNLQET-VSADSAPNFPGNCASDCYVAETNWFDTYGTRTKCSKGFSIPAEARALGF 317

Query: 320 VPTDRSLLAPLTRFV-----KMFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKS 379
             T +     L+  +     KM+T+ KKI KD + EP+EFEE+VAQA+FDLENTN ELKS
Sbjct: 318 SATQKQKSLRLSILLESDLAKMYTSRKKISKDNNAEPTEFEESVAQAVFDLENTNQELKS 377

Query: 380 DLKDLYINSALQVDVAGNKKAVVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANR 439
           DLKDLYINSA+QVDV+G+KKAVVI+VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A R
Sbjct: 378 DLKDLYINSAIQVDVSGSKKAVVIHVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATR 437

Query: 440 RILRPPKKGSAAQRPRTRTLTSVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKE 483
           RI+RPPKKGSAAQRPRTRTLT+VHEAMLED+VLPAEI+GKR RYR+DGSKIMKVFLDPKE
Sbjct: 438 RIVRPPKKGSAAQRPRTRTLTAVHEAMLEDVVLPAEIIGKRIRYRLDGSKIMKVFLDPKE 497

[Close]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL
Match: A0A498JSN3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_009066 PE=3 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 7.35e-178
Identity = 301/529 (56.90%), Postives = 362/529 (68.43%), Query Frame = 0


Query: 17  EEEELRRGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKR 76
           ++ ELRRG W +EED+LLI  I  H EG+WNLLAKRSGLRRTGKSCRLRWLNYLKPDVKR
Sbjct: 16  DDSELRRGQWILEEDSLLIQYIERHGEGQWNLLAKRSGLRRTGKSCRLRWLNYLKPDVKR 75

Query: 77  GNLSPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLNMDTNSDA 136
           GNLSP+EQLLILDLHSK GNRWSKIA++LPGRTDNEIKNYWRTRV KQARHLN+DT S  
Sbjct: 76  GNLSPEEQLLILDLHSKMGNRWSKIARYLPGRTDNEIKNYWRTRVHKQARHLNIDTKSRE 135

Query: 137 FQQIIRYYWIPRLIQKINQSSSLPPPPLPPPPPPSELPGTSQAEMVSQSSYGFEAPVTAT 196
           FQ +IR YW+PRL QKI + +S+    L      ++ P  SQ    +   + F A ++  
Sbjct: 136 FQNMIRCYWMPRLKQKIGRETSISSAVL------NQNPTISQPRENNTFQH-FTATISPP 195

Query: 197 P-------LQIGGDLMGSS----------CNSSSSSSSGFQNYENYGSFVND---YWDEE 256
           P       + + G +              C SS    S   +      F      Y  + 
Sbjct: 196 PQILVQEEINMSGTMYNLDVEKQNTEADYCRSSFIFPSEPMDMSKTAQFPECPPFYCGDN 255

Query: 257 HGRGEMMNWATTAVTGDS-----GYPVAHCHMAETSWTHSDF------------------ 316
           +G          +V+ DS     G     C++AE +W  + +                  
Sbjct: 256 NGYDMESFNLQESVSADSAPNFPGNSAGDCYVAENNWFDTQYFTIQYSRAIHNRSFIRFI 315

Query: 317 ---TGY-VPTD-RSLLAPLTR--------------FVKMFTALKKIHKDKDVEPSEFEET 376
              +G+ VP + R++   +T+              F KM+T+ KKI KD + EP+EFEE+
Sbjct: 316 IQPSGFSVPAEARAVGFSVTQKQKSLRLSILLESVFAKMYTSRKKISKDNNAEPTEFEES 375

Query: 377 VAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKAVVIYVPFRLRKAFRKIQLRLVR 436
           VAQA+FDLENTN ELKSDLKDLYINSA+QVDV+G+KKAVVI+VP+RLRKA+RKI +RLVR
Sbjct: 376 VAQAVFDLENTNQELKSDLKDLYINSAIQVDVSGSKKAVVIHVPYRLRKAYRKIHVRLVR 435

Query: 437 ELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLTSVHEAMLEDIVLPAEIVGKRTR 483
           ELEKKFSGKDVIL+A RRI+RPPKKGSAAQRPRTRTLT+VHEAMLED+VLPAEI GKR R
Sbjct: 436 ELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRTRTLTAVHEAMLEDVVLPAEITGKRIR 495

[Close]

BLAST of Csor.00g066180 vs. TAIR 10
Match: AT1G48830.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 303.5 bits (776), Expect = 3.0e-82
Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           MF+A  KIHK+K VE SE +E VAQA FDLENTN ELKS+LKDLY+NSA+QVD++G +KA
Sbjct: 1   MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           +V+ VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A RRI+RPPKKGSAA+RPR RTLT
Sbjct: 61  IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEA+L+D+VLPAEIVGKRTRYR+DG+KIMKVFLDPKE+NNTEYK+E+F+AVY+KL+GK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FEFPITEA
Sbjct: 181 DVVFEFPITEA 191

[Close]

BLAST of Csor.00g066180 vs. TAIR 10
Match: AT1G48830.2 (Ribosomal protein S7e family protein )

HSP 1 Score: 303.5 bits (776), Expect = 3.0e-82
Identity = 149/191 (78.01%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           MF+A  KIHK+K VE SE +E VAQA FDLENTN ELKS+LKDLY+NSA+QVD++G +KA
Sbjct: 1   MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           +V+ VP+RLRKA+RKI +RLVRELEKKFSGKDVIL+A RRI+RPPKKGSAA+RPR RTLT
Sbjct: 61  IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEA+L+D+VLPAEIVGKRTRYR+DG+KIMKVFLDPKE+NNTEYK+E+F+AVY+KL+GK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FEFPITEA
Sbjct: 181 DVVFEFPITEA 191

[Close]

BLAST of Csor.00g066180 vs. TAIR 10
Match: AT3G02560.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 298.9 bits (764), Expect = 7.4e-81
Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           M++   KIHKDK V P+EFEE V QALFDLENTN ELKS+LKDLYIN A+Q+D++GN+KA
Sbjct: 1   MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVIYVPFRLRKAFRKI LRLVRELEKKFSGKDVI VA RRI+RPPKKGSA QRPR RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEAMLED+  PAEIVGKRTRYR+DG+KIMKVFLD K +N+TEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FE+P+ EA
Sbjct: 181 DVVFEYPVIEA 191

[Close]

BLAST of Csor.00g066180 vs. TAIR 10
Match: AT3G02560.2 (Ribosomal protein S7e family protein )

HSP 1 Score: 298.9 bits (764), Expect = 7.4e-81
Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           M++   KIHKDK V P+EFEE V QALFDLENTN ELKS+LKDLYIN A+Q+D++GN+KA
Sbjct: 1   MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVIYVPFRLRKAFRKI LRLVRELEKKFSGKDVI VA RRI+RPPKKGSA QRPR RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEAMLED+  PAEIVGKRTRYR+DG+KIMKVFLD K +N+TEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query: 473 DVAFEFPITEA 484
           DV FE+P+ EA
Sbjct: 181 DVVFEYPVIEA 191

[Close]

BLAST of Csor.00g066180 vs. TAIR 10
Match: AT5G16130.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-79
Identity = 147/188 (78.19%), Postives = 165/188 (87.77%), Query Frame = 0


Query: 293 MFTALKKIHKDKDVEPSEFEETVAQALFDLENTNSELKSDLKDLYINSALQVDVAGNKKA 352
           MF+A  KI KDK+ EP+E EE VAQALFDLENTN ELKS+LKDLYIN A+ +D++GN+KA
Sbjct: 1   MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60

Query: 353 VVIYVPFRLRKAFRKIQLRLVRELEKKFSGKDVILVANRRILRPPKKGSAAQRPRTRTLT 412
           VVIYVPFRLRKAFRKI  RLVRELEKKFSGKDVI V  RRI+RPPKKG+A QRPR RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120

Query: 413 SVHEAMLEDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGK 472
           SVHEAMLED+  PAEIVGKRTRYR+DGSKIMKVFLD KE+NNTEYKLE+   VYRKL+GK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180

Query: 473 DVAFEFPI 481
           DV FE+P+
Sbjct: 181 DVVFEYPV 188

The following BLAST results are available for this feature:

BLAST of Csor.00g066180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNS1	1.5e-83	81.58	40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1	[more]
Q9C514	4.2e-81	78.01	40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1	[more]
Q9XH45	7.2e-81	78.95	40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1	[more]
Q9M885	1.0e-79	78.01	40S ribosomal protein S7-2 OS=Arabidopsis thaliana OX=3702 GN=RPS7B PE=2 SV=1	[more]
Q9XET4	2.0e-78	75.26	40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1	[more]

BLAST of Csor.00g066180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584357.1	0.0	100.00	40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023520149.1	1.08e-192	96.06	transcription factor MYB62-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924084.1	3.58e-191	96.06	transcription factor MYB62-like [Cucurbita moschata]	[more]
XP_023000999.1	2.23e-184	92.47	transcription factor MYB62-like [Cucurbita maxima]	[more]
KAB2609512.1	3.00e-183	61.00	transcription factor MYB108-like [Pyrus ussuriensis x Pyrus communis]	[more]

BLAST of Csor.00g066180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E866	1.73e-191	96.06	transcription factor MYB62-like OS=Cucurbita moschata OX=3662 GN=LOC111431623 PE...	[more]
A0A6J1KLJ0	1.08e-184	92.47	transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111495267 PE=4...	[more]
A0A5N5G7Y2	1.45e-183	61.00	Transcription factor MYB108-like OS=Pyrus ussuriensis x Pyrus communis OX=244845...	[more]
A0A498I5D4	6.95e-182	60.16	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_023569 PE=3 SV=1	[more]
A0A498JSN3	7.35e-178	56.90	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_009066 PE=3 SV=1	[more]

BLAST of Csor.00g066180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48830.1	3.0e-82	78.01	Ribosomal protein S7e family protein	[more]
AT1G48830.2	3.0e-82	78.01	Ribosomal protein S7e family protein	[more]
AT3G02560.1	7.4e-81	78.01	Ribosomal protein S7e family protein	[more]
AT3G02560.2	7.4e-81	78.01	Ribosomal protein S7e family protein	[more]
AT5G16130.1	1.8e-79	78.19	Ribosomal protein S7e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	GENE3D	1.10.10.60		coord: 80..124 e-value: 3.6E-18 score: 67.2
None	No IPR available	GENE3D	1.10.10.60		coord: 14..76 e-value: 1.6E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..184
None	No IPR available	PANTHER	PTHR11278:SF19	40S RIBOSOMAL PROTEIN S7	coord: 237..483
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 22..72 e-value: 2.2E-14 score: 63.8 coord: 75..123 e-value: 9.5E-15 score: 65.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 71..121 score: 9.802274
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 18..70 score: 11.358335
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 25..70 e-value: 8.67887E-11 score: 54.889
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 80..119 e-value: 3.2321E-11 score: 56.0446
IPR000554	Ribosomal protein S7e	PFAM	PF01251	Ribosomal_S7e	coord: 299..479 e-value: 2.2E-80 score: 268.8
IPR000554	Ribosomal protein S7e	PANTHER	PTHR11278	40S RIBOSOMAL PROTEIN S7	coord: 237..483
IPR000554	Ribosomal protein S7e	PROSITE	PS00948	RIBOSOMAL_S7E	coord: 371..384
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 23..70 e-value: 1.7E-12 score: 47.3 coord: 76..119 e-value: 3.8E-14 score: 52.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 18..70 score: 18.035107
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 71..125 score: 24.705746
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 21..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g066180.m01	Csor.00g066180.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0042274	ribosomal small subunit biogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003735	structural constituent of ribosome